RNA–Protein interactions for RNA: ENST00000566829.1

BBS4-211, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-211ENST00000566829 NISCHQ9Y2I1 1504 aa20.64■□□□□ 0.9
BBS4-211ENST00000566829 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
BBS4-211ENST00000566829 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
BBS4-211ENST00000566829 ABCC9O60706 1549 aa17.42■□□□□ 0.38
BBS4-211ENST00000566829 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
BBS4-211ENST00000566829 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
BBS4-211ENST00000566829 DCAF1Q9Y4B6 1507 aa17.09■□□□□ 0.33
BBS4-211ENST00000566829 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
BBS4-211ENST00000566829 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
BBS4-211ENST00000566829 NACADO15069 1562 aa17■□□□□ 0.31
BBS4-211ENST00000566829 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
BBS4-211ENST00000566829 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
BBS4-211ENST00000566829 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
BBS4-211ENST00000566829 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
BBS4-211ENST00000566829 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
BBS4-211ENST00000566829 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
BBS4-211ENST00000566829 CECR2Q9BXF3 1484 aa16.05■□□□□ 0.16
BBS4-211ENST00000566829 BAZ1AQ9NRL2 1556 aaPredicted RBP15.97■□□□□ 0.15
BBS4-211ENST00000566829 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
BBS4-211ENST00000566829 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
BBS4-211ENST00000566829 MROH2BQ7Z745 1585 aa15.93■□□□□ 0.14
BBS4-211ENST00000566829 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
BBS4-211ENST00000566829 WIZO95785 1651 aa15.79■□□□□ 0.12
BBS4-211ENST00000566829 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
BBS4-211ENST00000566829 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
BBS4-211ENST00000566829 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
BBS4-211ENST00000566829 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
BBS4-211ENST00000566829 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
BBS4-211ENST00000566829 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
BBS4-211ENST00000566829 NCAPD3P42695 1498 aa15.67■□□□□ 0.1
BBS4-211ENST00000566829 HMGXB3Q12766 1538 aa15.64■□□□□ 0.09
BBS4-211ENST00000566829 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
BBS4-211ENST00000566829 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
BBS4-211ENST00000566829 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
BBS4-211ENST00000566829 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
BBS4-211ENST00000566829 PHF23Q9BUL5 403 aaPredicted RBP15.42■□□□□ 0.06
BBS4-211ENST00000566829 CFTRP13569 1480 aa15.23■□□□□ 0.03
BBS4-211ENST00000566829 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
BBS4-211ENST00000566829 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
BBS4-211ENST00000566829 NESP48681 1621 aa15.21■□□□□ 0.02
BBS4-211ENST00000566829 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
BBS4-211ENST00000566829 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
BBS4-211ENST00000566829 FANCD2Q9BXW9 1451 aa15.07■□□□□ 0
BBS4-211ENST00000566829 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
BBS4-211ENST00000566829 ABCC8Q09428 1581 aa15.02□□□□□ -0.01
BBS4-211ENST00000566829 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
BBS4-211ENST00000566829 ERCC6Q03468 1493 aa14.97□□□□□ -0.01
BBS4-211ENST00000566829 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
BBS4-211ENST00000566829 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
BBS4-211ENST00000566829 CUX1P39880 1505 aa14.92□□□□□ -0.02
BBS4-211ENST00000566829 THOC2Q8NI27 1593 aaKnown RBP14.91□□□□□ -0.02
BBS4-211ENST00000566829 MRC2Q9UBG0 1479 aa14.91□□□□□ -0.02
BBS4-211ENST00000566829 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
BBS4-211ENST00000566829 URB2Q14146 1524 aaKnown RBP14.91□□□□□ -0.02
BBS4-211ENST00000566829 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
BBS4-211ENST00000566829 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
BBS4-211ENST00000566829 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
BBS4-211ENST00000566829 WDR62O43379 1518 aa14.87□□□□□ -0.03
BBS4-211ENST00000566829 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
BBS4-211ENST00000566829 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
BBS4-211ENST00000566829 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
BBS4-211ENST00000566829 CUX2O14529 1486 aa14.72□□□□□ -0.05
BBS4-211ENST00000566829 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
BBS4-211ENST00000566829 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
BBS4-211ENST00000566829 TARBP1Q13395 1621 aaKnown RBP14.7□□□□□ -0.06
BBS4-211ENST00000566829 SOGA1O94964 1423 aa14.7□□□□□ -0.06
BBS4-211ENST00000566829 FOXD1Q16676 465 aa14.68□□□□□ -0.06
BBS4-211ENST00000566829 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
BBS4-211ENST00000566829 IFT140Q96RY7 1462 aa14.67□□□□□ -0.06
BBS4-211ENST00000566829 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
BBS4-211ENST00000566829 ABCA5Q8WWZ7 1642 aa14.61□□□□□ -0.07
BBS4-211ENST00000566829 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
BBS4-211ENST00000566829 KIF27Q86VH2 1401 aa14.59□□□□□ -0.07
BBS4-211ENST00000566829 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
BBS4-211ENST00000566829 EIF4G3O43432 1585 aaKnown RBP14.57□□□□□ -0.08
BBS4-211ENST00000566829 EEA1Q15075 1411 aa14.57□□□□□ -0.08
BBS4-211ENST00000566829 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.085e-6■■■□□ 16.9
BBS4-211ENST00000566829 GAPVD1Q14C86 1478 aa14.55□□□□□ -0.08
BBS4-211ENST00000566829 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
BBS4-211ENST00000566829 FAM9AQ8IZU1 332 aaPredicted RBP14.54□□□□□ -0.08
BBS4-211ENST00000566829 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
BBS4-211ENST00000566829 ERICH3Q5RHP9 1530 aa14.5□□□□□ -0.09
BBS4-211ENST00000566829 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
BBS4-211ENST00000566829 IGF1RP08069 1367 aa14.48□□□□□ -0.09
BBS4-211ENST00000566829 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
BBS4-211ENST00000566829 CUL7Q14999 1698 aa14.46□□□□□ -0.09
BBS4-211ENST00000566829 ADAMTS12P58397 1594 aa14.44□□□□□ -0.1
BBS4-211ENST00000566829 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
BBS4-211ENST00000566829 KIF21BO75037 1637 aa14.43□□□□□ -0.1
BBS4-211ENST00000566829 PRXQ9BXM0 1461 aa14.43□□□□□ -0.1
BBS4-211ENST00000566829 MAGI1Q96QZ7 1491 aaPredicted RBP14.41□□□□□ -0.1
BBS4-211ENST00000566829 CARMIL1Q5VZK9 1371 aa14.4□□□□□ -0.1
BBS4-211ENST00000566829 FHAD1B1AJZ9 1412 aa14.39□□□□□ -0.11
BBS4-211ENST00000566829 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
BBS4-211ENST00000566829 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
BBS4-211ENST00000566829 GOLGA3Q08378 1498 aa14.36□□□□□ -0.11
BBS4-211ENST00000566829 CHD1O14646 1710 aa14.33□□□□□ -0.12
BBS4-211ENST00000566829 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
BBS4-211ENST00000566829 LOC105371045A0A1W2PR82 267 aa14.32□□□□□ -0.12
BBS4-211ENST00000566829 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms