RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
CDH11-212ENST00000566827 CCDC180Q9P1Z9 1646 aa23■■□□□ 1.27
CDH11-212ENST00000566827 ABCC9O60706 1549 aa22.87■■□□□ 1.25
CDH11-212ENST00000566827 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
CDH11-212ENST00000566827 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
CDH11-212ENST00000566827 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
CDH11-212ENST00000566827 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
CDH11-212ENST00000566827 NACADO15069 1562 aa21.63■■□□□ 1.05
CDH11-212ENST00000566827 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
CDH11-212ENST00000566827 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
CDH11-212ENST00000566827 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
CDH11-212ENST00000566827 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
CDH11-212ENST00000566827 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
CDH11-212ENST00000566827 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
CDH11-212ENST00000566827 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
CDH11-212ENST00000566827 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.96
CDH11-212ENST00000566827 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
CDH11-212ENST00000566827 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.89
CDH11-212ENST00000566827 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
CDH11-212ENST00000566827 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
CDH11-212ENST00000566827 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
CDH11-212ENST00000566827 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
CDH11-212ENST00000566827 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
CDH11-212ENST00000566827 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
CDH11-212ENST00000566827 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
CDH11-212ENST00000566827 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
CDH11-212ENST00000566827 WIZO95785 1651 aa20.12■□□□□ 0.81
CDH11-212ENST00000566827 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
CDH11-212ENST00000566827 NCAPD3P42695 1498 aa20.03■□□□□ 0.8
CDH11-212ENST00000566827 SMARCA2P51531 1590 aa20■□□□□ 0.79
CDH11-212ENST00000566827 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
CDH11-212ENST00000566827 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
CDH11-212ENST00000566827 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
CDH11-212ENST00000566827 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
CDH11-212ENST00000566827 NESP48681 1621 aa19.87■□□□□ 0.77
CDH11-212ENST00000566827 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
CDH11-212ENST00000566827 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
CDH11-212ENST00000566827 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
CDH11-212ENST00000566827 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
CDH11-212ENST00000566827 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
CDH11-212ENST00000566827 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
CDH11-212ENST00000566827 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
CDH11-212ENST00000566827 CFTRP13569 1480 aa19.41■□□□□ 0.7
CDH11-212ENST00000566827 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
CDH11-212ENST00000566827 FANCD2Q9BXW9 1451 aa19.36■□□□□ 0.69
CDH11-212ENST00000566827 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
CDH11-212ENST00000566827 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
CDH11-212ENST00000566827 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.68
CDH11-212ENST00000566827 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
CDH11-212ENST00000566827 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
CDH11-212ENST00000566827 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
CDH11-212ENST00000566827 RTN4Q9NQC3 1192 aaKnown RBP19.14■□□□□ 0.66
CDH11-212ENST00000566827 WDR62O43379 1518 aa19.12■□□□□ 0.65
CDH11-212ENST00000566827 CUX2O14529 1486 aa19.1■□□□□ 0.65
CDH11-212ENST00000566827 ABCC8Q09428 1581 aa19.08■□□□□ 0.64
CDH11-212ENST00000566827 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
CDH11-212ENST00000566827 CUX1P39880 1505 aa19■□□□□ 0.63
CDH11-212ENST00000566827 ZNF608Q9ULD9 1512 aaPredicted RBP18.98■□□□□ 0.63
CDH11-212ENST00000566827 RAD54L2Q9Y4B4 1467 aa18.98■□□□□ 0.63
CDH11-212ENST00000566827 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
CDH11-212ENST00000566827 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
CDH11-212ENST00000566827 FGD5Q6ZNL6 1462 aa18.91■□□□□ 0.62
CDH11-212ENST00000566827 SYNJ1O43426 1573 aa18.9■□□□□ 0.62
CDH11-212ENST00000566827 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
CDH11-212ENST00000566827 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDH11-212ENST00000566827 TDRD9Q8NDG6 1382 aaKnown RBP18.87■□□□□ 0.61
CDH11-212ENST00000566827 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
CDH11-212ENST00000566827 SOGA1O94964 1423 aa18.83■□□□□ 0.6
CDH11-212ENST00000566827 TARBP1Q13395 1621 aaKnown RBP18.83■□□□□ 0.6
CDH11-212ENST00000566827 KCNA4P22459 653 aa18.8■□□□□ 0.6
CDH11-212ENST00000566827 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
CDH11-212ENST00000566827 EIF4G3O43432 1585 aaKnown RBP18.78■□□□□ 0.6
CDH11-212ENST00000566827 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
CDH11-212ENST00000566827 FBLN2P98095 1184 aa18.71■□□□□ 0.59
CDH11-212ENST00000566827 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
CDH11-212ENST00000566827 AMER1Q5JTC6 1135 aaPredicted RBP18.66■□□□□ 0.58
CDH11-212ENST00000566827 WDR97A6NE52 1622 aa18.65■□□□□ 0.58
CDH11-212ENST00000566827 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
CDH11-212ENST00000566827 SNAPC4Q5SXM2 1469 aa18.6■□□□□ 0.57
CDH11-212ENST00000566827 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
CDH11-212ENST00000566827 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
CDH11-212ENST00000566827 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
CDH11-212ENST00000566827 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
CDH11-212ENST00000566827 CHD1O14646 1710 aa18.57■□□□□ 0.56
CDH11-212ENST00000566827 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
CDH11-212ENST00000566827 PBRM1Q86U86 1689 aa18.55■□□□□ 0.56
CDH11-212ENST00000566827 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
CDH11-212ENST00000566827 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
CDH11-212ENST00000566827 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
CDH11-212ENST00000566827 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
CDH11-212ENST00000566827 FAM9AQ8IZU1 332 aaPredicted RBP18.47■□□□□ 0.55
CDH11-212ENST00000566827 MAGI1Q96QZ7 1491 aaPredicted RBP18.39■□□□□ 0.54
CDH11-212ENST00000566827 IGF1RP08069 1367 aa18.39■□□□□ 0.54
CDH11-212ENST00000566827 SYNJ2O15056 1496 aa18.39■□□□□ 0.53
CDH11-212ENST00000566827 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
CDH11-212ENST00000566827 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
CDH11-212ENST00000566827 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
CDH11-212ENST00000566827 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.52
CDH11-212ENST00000566827 CEP170Q5SW79 1584 aa18.32■□□□□ 0.52
CDH11-212ENST00000566827 DAXXQ9UER7 740 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms