RNA–Protein interactions for RNA: ENST00000566727.5

NUP93-213, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-213ENST00000566727 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
NUP93-213ENST00000566727 CCDC180Q9P1Z9 1646 aa15.71■□□□□ 0.11
NUP93-213ENST00000566727 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ -0
NUP93-213ENST00000566727 ABCC9O60706 1549 aa14.99□□□□□ -0.01
NUP93-213ENST00000566727 DCAF1Q9Y4B6 1507 aa14.84□□□□□ -0.03
NUP93-213ENST00000566727 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
NUP93-213ENST00000566727 MYO15BQ96JP2 1530 aa14.72□□□□□ -0.05
NUP93-213ENST00000566727 NACADO15069 1562 aa14.66□□□□□ -0.06
NUP93-213ENST00000566727 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
NUP93-213ENST00000566727 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
NUP93-213ENST00000566727 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
NUP93-213ENST00000566727 UNC13AQ9UPW8 1703 aa14.26□□□□□ -0.13
NUP93-213ENST00000566727 BICRAQ9NZM4 1560 aa14.17□□□□□ -0.14
NUP93-213ENST00000566727 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
NUP93-213ENST00000566727 CECR2Q9BXF3 1484 aa13.95□□□□□ -0.18
NUP93-213ENST00000566727 MROH2BQ7Z745 1585 aa13.85□□□□□ -0.19
NUP93-213ENST00000566727 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
NUP93-213ENST00000566727 RSF1Q96T23 1441 aaPredicted RBP13.84□□□□□ -0.19
NUP93-213ENST00000566727 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
NUP93-213ENST00000566727 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
NUP93-213ENST00000566727 EIF4G1Q04637 1599 aaKnown RBP13.74□□□□□ -0.21
NUP93-213ENST00000566727 WIZO95785 1651 aa13.71□□□□□ -0.21
NUP93-213ENST00000566727 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
NUP93-213ENST00000566727 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
NUP93-213ENST00000566727 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
NUP93-213ENST00000566727 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
NUP93-213ENST00000566727 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
NUP93-213ENST00000566727 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
NUP93-213ENST00000566727 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
NUP93-213ENST00000566727 HMGXB3Q12766 1538 aa13.52□□□□□ -0.25
NUP93-213ENST00000566727 CCDC88BA6NC98 1476 aa13.43□□□□□ -0.26
NUP93-213ENST00000566727 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
NUP93-213ENST00000566727 CFTRP13569 1480 aa13.19□□□□□ -0.3
NUP93-213ENST00000566727 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
NUP93-213ENST00000566727 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
NUP93-213ENST00000566727 NESP48681 1621 aa13.12□□□□□ -0.31
NUP93-213ENST00000566727 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
NUP93-213ENST00000566727 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
NUP93-213ENST00000566727 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
NUP93-213ENST00000566727 FANCD2Q9BXW9 1451 aa13.03□□□□□ -0.32
NUP93-213ENST00000566727 WRNQ14191 1432 aaPredicted RBP eCLIP13.02□□□□□ -0.33
NUP93-213ENST00000566727 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
NUP93-213ENST00000566727 TRIM41Q8WV44 630 aa12.99□□□□□ -0.33
NUP93-213ENST00000566727 PDS5BQ9NTI5 1447 aa12.98□□□□□ -0.33
NUP93-213ENST00000566727 CUX1P39880 1505 aa12.97□□□□□ -0.33
NUP93-213ENST00000566727 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
NUP93-213ENST00000566727 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
NUP93-213ENST00000566727 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
NUP93-213ENST00000566727 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
NUP93-213ENST00000566727 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.35
NUP93-213ENST00000566727 URB2Q14146 1524 aaKnown RBP12.89□□□□□ -0.35
NUP93-213ENST00000566727 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
NUP93-213ENST00000566727 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
NUP93-213ENST00000566727 ERCC6Q03468 1493 aa12.84□□□□□ -0.35
NUP93-213ENST00000566727 FGD5Q6ZNL6 1462 aa12.84□□□□□ -0.35
NUP93-213ENST00000566727 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
NUP93-213ENST00000566727 SOGA1O94964 1423 aa12.81□□□□□ -0.36
NUP93-213ENST00000566727 POLA1P09884 1462 aaPredicted RBP12.8□□□□□ -0.36
NUP93-213ENST00000566727 WDR62O43379 1518 aa12.8□□□□□ -0.36
NUP93-213ENST00000566727 RUSC2Q8N2Y8 1516 aa12.78□□□□□ -0.36
NUP93-213ENST00000566727 RAD54L2Q9Y4B4 1467 aa12.75□□□□□ -0.37
NUP93-213ENST00000566727 EEA1Q15075 1411 aa12.74□□□□□ -0.37
NUP93-213ENST00000566727 FAM9AQ8IZU1 332 aaPredicted RBP12.74□□□□□ -0.37
NUP93-213ENST00000566727 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
NUP93-213ENST00000566727 CUX2O14529 1486 aa12.72□□□□□ -0.37
NUP93-213ENST00000566727 WDR97A6NE52 1622 aa12.72□□□□□ -0.37
NUP93-213ENST00000566727 TARBP1Q13395 1621 aaKnown RBP12.71□□□□□ -0.37
NUP93-213ENST00000566727 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
NUP93-213ENST00000566727 IFT140Q96RY7 1462 aa12.66□□□□□ -0.38
NUP93-213ENST00000566727 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
NUP93-213ENST00000566727 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
NUP93-213ENST00000566727 LOC105371045A0A1W2PR82 267 aa12.63□□□□□ -0.39
NUP93-213ENST00000566727 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
NUP93-213ENST00000566727 IGF1RP08069 1367 aa12.61□□□□□ -0.39
NUP93-213ENST00000566727 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
NUP93-213ENST00000566727 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
NUP93-213ENST00000566727 PRXQ9BXM0 1461 aa12.6□□□□□ -0.39
NUP93-213ENST00000566727 KIF21BO75037 1637 aa12.6□□□□□ -0.39
NUP93-213ENST00000566727 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.4
NUP93-213ENST00000566727 GOLGA3Q08378 1498 aa12.57□□□□□ -0.4
NUP93-213ENST00000566727 ERICH3Q5RHP9 1530 aa12.57□□□□□ -0.4
NUP93-213ENST00000566727 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
NUP93-213ENST00000566727 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
NUP93-213ENST00000566727 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
NUP93-213ENST00000566727 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
NUP93-213ENST00000566727 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
NUP93-213ENST00000566727 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
NUP93-213ENST00000566727 CUL7Q14999 1698 aa12.53□□□□□ -0.4
NUP93-213ENST00000566727 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
NUP93-213ENST00000566727 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
NUP93-213ENST00000566727 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
NUP93-213ENST00000566727 FHAD1B1AJZ9 1412 aa12.46□□□□□ -0.41
NUP93-213ENST00000566727 UBTFP17480 764 aaKnown RBP12.45□□□□□ -0.42
NUP93-213ENST00000566727 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
NUP93-213ENST00000566727 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
NUP93-213ENST00000566727 SYNJ2O15056 1496 aa12.4□□□□□ -0.43
NUP93-213ENST00000566727 GRIN2AQ12879 1464 aa12.38□□□□□ -0.43
NUP93-213ENST00000566727 CTTNBP2Q8WZ74 1663 aa12.35□□□□□ -0.43
NUP93-213ENST00000566727 CLIP1P30622 1438 aa12.34□□□□□ -0.43
NUP93-213ENST00000566727 CEP170Q5SW79 1584 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms