RNA–Protein interactions for RNA: ENST00000566678.1

NUP93-212, Transcript of nucleoporin 93, humanhuman

TSL 2

Gene NUP93, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-212ENST00000566678 NISCHQ9Y2I1 1504 aa21.83■■□□□ 1.09
NUP93-212ENST00000566678 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
NUP93-212ENST00000566678 ABCC9O60706 1549 aa19.1■□□□□ 0.65
NUP93-212ENST00000566678 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
NUP93-212ENST00000566678 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
NUP93-212ENST00000566678 NACADO15069 1562 aa18.25■□□□□ 0.51
NUP93-212ENST00000566678 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
NUP93-212ENST00000566678 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
NUP93-212ENST00000566678 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
NUP93-212ENST00000566678 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
NUP93-212ENST00000566678 SCRIBQ14160 1630 aa17.77■□□□□ 0.44
NUP93-212ENST00000566678 UNC13AQ9UPW8 1703 aa17.73■□□□□ 0.43
NUP93-212ENST00000566678 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
NUP93-212ENST00000566678 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
NUP93-212ENST00000566678 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
NUP93-212ENST00000566678 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
NUP93-212ENST00000566678 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
NUP93-212ENST00000566678 CECR2Q9BXF3 1484 aa17.15■□□□□ 0.34
NUP93-212ENST00000566678 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
NUP93-212ENST00000566678 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
NUP93-212ENST00000566678 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
NUP93-212ENST00000566678 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
NUP93-212ENST00000566678 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
NUP93-212ENST00000566678 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
NUP93-212ENST00000566678 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
NUP93-212ENST00000566678 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
NUP93-212ENST00000566678 PEG3Q9GZU2 1588 aa16.71■□□□□ 0.27
NUP93-212ENST00000566678 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
NUP93-212ENST00000566678 WIZO95785 1651 aa16.63■□□□□ 0.25
NUP93-212ENST00000566678 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
NUP93-212ENST00000566678 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
NUP93-212ENST00000566678 NESP48681 1621 aa16.48■□□□□ 0.23
NUP93-212ENST00000566678 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
NUP93-212ENST00000566678 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
NUP93-212ENST00000566678 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
NUP93-212ENST00000566678 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
NUP93-212ENST00000566678 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
NUP93-212ENST00000566678 CFTRP13569 1480 aa16.26■□□□□ 0.19
NUP93-212ENST00000566678 CUX2O14529 1486 aa16.25■□□□□ 0.19
NUP93-212ENST00000566678 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
NUP93-212ENST00000566678 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
NUP93-212ENST00000566678 KIF21AQ7Z4S6 1674 aa16.21■□□□□ 0.19
NUP93-212ENST00000566678 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
NUP93-212ENST00000566678 THOC2Q8NI27 1593 aaKnown RBP16.16■□□□□ 0.18
NUP93-212ENST00000566678 WDR62O43379 1518 aa16.07■□□□□ 0.16
NUP93-212ENST00000566678 PRDM2Q13029 1718 aa16.02■□□□□ 0.16
NUP93-212ENST00000566678 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
NUP93-212ENST00000566678 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
NUP93-212ENST00000566678 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
NUP93-212ENST00000566678 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
NUP93-212ENST00000566678 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
NUP93-212ENST00000566678 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
NUP93-212ENST00000566678 SOGA1O94964 1423 aa15.79■□□□□ 0.12
NUP93-212ENST00000566678 CUX1P39880 1505 aa15.78■□□□□ 0.12
NUP93-212ENST00000566678 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
NUP93-212ENST00000566678 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
NUP93-212ENST00000566678 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
NUP93-212ENST00000566678 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
NUP93-212ENST00000566678 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
NUP93-212ENST00000566678 AQRO60306 1485 aaKnown RBP eCLIP15.72■□□□□ 0.11
NUP93-212ENST00000566678 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
NUP93-212ENST00000566678 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
NUP93-212ENST00000566678 FBLN2P98095 1184 aa15.69■□□□□ 0.1
NUP93-212ENST00000566678 EIF4G3O43432 1585 aaKnown RBP15.69■□□□□ 0.1
NUP93-212ENST00000566678 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
NUP93-212ENST00000566678 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
NUP93-212ENST00000566678 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
NUP93-212ENST00000566678 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
NUP93-212ENST00000566678 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
NUP93-212ENST00000566678 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
NUP93-212ENST00000566678 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
NUP93-212ENST00000566678 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
NUP93-212ENST00000566678 WDR97A6NE52 1622 aa15.58■□□□□ 0.09
NUP93-212ENST00000566678 SNAPC4Q5SXM2 1469 aa15.58■□□□□ 0.08
NUP93-212ENST00000566678 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.08
NUP93-212ENST00000566678 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
NUP93-212ENST00000566678 ABCA5Q8WWZ7 1642 aa15.48■□□□□ 0.07
NUP93-212ENST00000566678 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
NUP93-212ENST00000566678 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
NUP93-212ENST00000566678 KIF27Q86VH2 1401 aa15.45■□□□□ 0.06
NUP93-212ENST00000566678 CHD1O14646 1710 aa15.45■□□□□ 0.06
NUP93-212ENST00000566678 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
NUP93-212ENST00000566678 FHAD1B1AJZ9 1412 aa15.41■□□□□ 0.06
NUP93-212ENST00000566678 ADAMTS12P58397 1594 aa15.37■□□□□ 0.05
NUP93-212ENST00000566678 GRIN2AQ12879 1464 aa15.37■□□□□ 0.05
NUP93-212ENST00000566678 IGF1RP08069 1367 aa15.33■□□□□ 0.04
NUP93-212ENST00000566678 ARHGEF11O15085 1522 aa15.33■□□□□ 0.04
NUP93-212ENST00000566678 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
NUP93-212ENST00000566678 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
NUP93-212ENST00000566678 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
NUP93-212ENST00000566678 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
NUP93-212ENST00000566678 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
NUP93-212ENST00000566678 CARMIL1Q5VZK9 1371 aa15.29■□□□□ 0.04
NUP93-212ENST00000566678 NUP160Q12769 1436 aa15.26■□□□□ 0.03
NUP93-212ENST00000566678 CUL7Q14999 1698 aa15.26■□□□□ 0.03
NUP93-212ENST00000566678 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
NUP93-212ENST00000566678 RUSC2Q8N2Y8 1516 aa15.23■□□□□ 0.03
NUP93-212ENST00000566678 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
NUP93-212ENST00000566678 FAM9AQ8IZU1 332 aaPredicted RBP15.2■□□□□ 0.02
NUP93-212ENST00000566678 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms