RNA–Protein interactions for RNA: ENST00000566564.1

MMP2-205, Transcript of matrix metallopeptidase 2, humanhuman

TSL 3

Gene MMP2, Length 443 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-205ENST00000566564 NISCHQ9Y2I1 1504 aa15.8■□□□□ 0.12
MMP2-205ENST00000566564 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.22
MMP2-205ENST00000566564 ZCCHC6Q5VYS8 1495 aaKnown RBP13.35□□□□□ -0.27
MMP2-205ENST00000566564 SHROOM4Q9ULL8 1493 aa13.15□□□□□ -0.3
MMP2-205ENST00000566564 DCAF1Q9Y4B6 1507 aa13.05□□□□□ -0.32
MMP2-205ENST00000566564 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
MMP2-205ENST00000566564 SUPT5HO00267 1087 aaKnown RBP12.78□□□□□ -0.36
MMP2-205ENST00000566564 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
MMP2-205ENST00000566564 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
MMP2-205ENST00000566564 NACADO15069 1562 aa12.64□□□□□ -0.39
MMP2-205ENST00000566564 ABCC9O60706 1549 aa12.62□□□□□ -0.39
MMP2-205ENST00000566564 RB1CC1Q8TDY2 1594 aa12.48□□□□□ -0.41
MMP2-205ENST00000566564 CHIC1Q5VXU3 224 aa12.37□□□□□ -0.43
MMP2-205ENST00000566564 RSF1Q96T23 1441 aaPredicted RBP12.36□□□□□ -0.43
MMP2-205ENST00000566564 UNC13AQ9UPW8 1703 aa12.34□□□□□ -0.43
MMP2-205ENST00000566564 CECR2Q9BXF3 1484 aa12.24□□□□□ -0.45
MMP2-205ENST00000566564 MROH2BQ7Z745 1585 aa12.23□□□□□ -0.45
MMP2-205ENST00000566564 WIZO95785 1651 aa12.2□□□□□ -0.46
MMP2-205ENST00000566564 BAZ1AQ9NRL2 1556 aaPredicted RBP12.2□□□□□ -0.46
MMP2-205ENST00000566564 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
MMP2-205ENST00000566564 BICRAQ9NZM4 1560 aa12.08□□□□□ -0.48
MMP2-205ENST00000566564 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
MMP2-205ENST00000566564 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
MMP2-205ENST00000566564 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
MMP2-205ENST00000566564 SMARCA2P51531 1590 aa11.96□□□□□ -0.5
MMP2-205ENST00000566564 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
MMP2-205ENST00000566564 LOC105371045A0A1W2PR82 267 aa11.92□□□□□ -0.5
MMP2-205ENST00000566564 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
MMP2-205ENST00000566564 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
MMP2-205ENST00000566564 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
MMP2-205ENST00000566564 FAM9AQ8IZU1 332 aaPredicted RBP11.8□□□□□ -0.52
MMP2-205ENST00000566564 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
MMP2-205ENST00000566564 BAZ1BQ9UIG0 1483 aaKnown RBP11.77□□□□□ -0.52
MMP2-205ENST00000566564 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
MMP2-205ENST00000566564 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
MMP2-205ENST00000566564 HRCP23327 699 aa11.67□□□□□ -0.54
MMP2-205ENST00000566564 EEA1Q15075 1411 aa11.66□□□□□ -0.54
MMP2-205ENST00000566564 TRIM26Q12899 539 aaPredicted RBP11.65□□□□□ -0.54
MMP2-205ENST00000566564 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
MMP2-205ENST00000566564 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
MMP2-205ENST00000566564 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
MMP2-205ENST00000566564 NCAPD3P42695 1498 aa11.61□□□□□ -0.55
MMP2-205ENST00000566564 SOGA1O94964 1423 aa11.6□□□□□ -0.55
MMP2-205ENST00000566564 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
MMP2-205ENST00000566564 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
MMP2-205ENST00000566564 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
MMP2-205ENST00000566564 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
MMP2-205ENST00000566564 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
MMP2-205ENST00000566564 KIF21BO75037 1637 aa11.54□□□□□ -0.56
MMP2-205ENST00000566564 GOLGA3Q08378 1498 aa11.53□□□□□ -0.56
MMP2-205ENST00000566564 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
MMP2-205ENST00000566564 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
MMP2-205ENST00000566564 CEP162Q5TB80 1403 aa11.51□□□□□ -0.57
MMP2-205ENST00000566564 CEP164Q9UPV0 1460 aa11.49□□□□□ -0.57
MMP2-205ENST00000566564 CC2D2AQ9P2K1 1620 aa11.46□□□□□ -0.57
MMP2-205ENST00000566564 CFTRP13569 1480 aa11.44□□□□□ -0.58
MMP2-205ENST00000566564 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
MMP2-205ENST00000566564 CUX1P39880 1505 aa11.43□□□□□ -0.58
MMP2-205ENST00000566564 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
MMP2-205ENST00000566564 ERICH3Q5RHP9 1530 aa11.37□□□□□ -0.59
MMP2-205ENST00000566564 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
MMP2-205ENST00000566564 AEBP2Q6ZN18 517 aaPredicted RBP11.36□□□□□ -0.59
MMP2-205ENST00000566564 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
MMP2-205ENST00000566564 CADPSQ9ULU8 1353 aa11.34□□□□□ -0.59
MMP2-205ENST00000566564 CLIP1P30622 1438 aa11.34□□□□□ -0.59
MMP2-205ENST00000566564 KIF27Q86VH2 1401 aa11.33□□□□□ -0.6
MMP2-205ENST00000566564 PRXQ9BXM0 1461 aa11.31□□□□□ -0.6
MMP2-205ENST00000566564 VPS8Q8N3P4 1428 aa11.28□□□□□ -0.6
MMP2-205ENST00000566564 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
MMP2-205ENST00000566564 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
MMP2-205ENST00000566564 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
MMP2-205ENST00000566564 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
MMP2-205ENST00000566564 CUX2O14529 1486 aa11.24□□□□□ -0.61
MMP2-205ENST00000566564 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
MMP2-205ENST00000566564 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
MMP2-205ENST00000566564 APLP2Q06481 763 aa11.2□□□□□ -0.62
MMP2-205ENST00000566564 NESP48681 1621 aa11.18□□□□□ -0.62
MMP2-205ENST00000566564 RANGAP1P46060 587 aaPredicted RBP11.18□□□□□ -0.62
MMP2-205ENST00000566564 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
MMP2-205ENST00000566564 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
MMP2-205ENST00000566564 WDR97A6NE52 1622 aa11.16□□□□□ -0.62
MMP2-205ENST00000566564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
MMP2-205ENST00000566564 IGF1RP08069 1367 aa11.15□□□□□ -0.63
MMP2-205ENST00000566564 CUL7Q14999 1698 aa11.14□□□□□ -0.63
MMP2-205ENST00000566564 ABCA10Q8WWZ4 1543 aa11.14□□□□□ -0.63
MMP2-205ENST00000566564 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
MMP2-205ENST00000566564 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
MMP2-205ENST00000566564 CARMIL1Q5VZK9 1371 aa11.13□□□□□ -0.63
MMP2-205ENST00000566564 POLA1P09884 1462 aaPredicted RBP11.12□□□□□ -0.63
MMP2-205ENST00000566564 ARHGAP35Q9NRY4 1499 aa11.12□□□□□ -0.63
MMP2-205ENST00000566564 RAD54L2Q9Y4B4 1467 aa11.11□□□□□ -0.63
MMP2-205ENST00000566564 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
MMP2-205ENST00000566564 PDS5BQ9NTI5 1447 aa11.09□□□□□ -0.63
MMP2-205ENST00000566564 ABCA5Q8WWZ7 1642 aa11.07□□□□□ -0.64
MMP2-205ENST00000566564 CFAP43Q8NDM7 1665 aa11.05□□□□□ -0.64
MMP2-205ENST00000566564 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
MMP2-205ENST00000566564 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
MMP2-205ENST00000566564 TIAM1Q13009 1591 aa11.03□□□□□ -0.64
MMP2-205ENST00000566564 HNRNPUL2Q1KMD3 747 aaKnown RBP11.03□□□□□ -0.64
MMP2-205ENST00000566564 PBRM1Q86U86 1689 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms