RNA–Protein interactions for RNA: ENST00000566543.1

PDP2-204, Transcript of pyruvate dehyrogenase phosphatase catalytic subunit 2, humanhuman

TSL 4

Gene PDP2, Length 560 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDP2-204ENST00000566543 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
PDP2-204ENST00000566543 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
PDP2-204ENST00000566543 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
PDP2-204ENST00000566543 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
PDP2-204ENST00000566543 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
PDP2-204ENST00000566543 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
PDP2-204ENST00000566543 DCAF8L2P0C7V8 631 aa18.14■□□□□ 0.49
PDP2-204ENST00000566543 ABCC9O60706 1549 aa18.03■□□□□ 0.48
PDP2-204ENST00000566543 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
PDP2-204ENST00000566543 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
PDP2-204ENST00000566543 NACADO15069 1562 aa17.84■□□□□ 0.45
PDP2-204ENST00000566543 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
PDP2-204ENST00000566543 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
PDP2-204ENST00000566543 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
PDP2-204ENST00000566543 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
PDP2-204ENST00000566543 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.32
PDP2-204ENST00000566543 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
PDP2-204ENST00000566543 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
PDP2-204ENST00000566543 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
PDP2-204ENST00000566543 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
PDP2-204ENST00000566543 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
PDP2-204ENST00000566543 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
PDP2-204ENST00000566543 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
PDP2-204ENST00000566543 WIZO95785 1651 aa16.81■□□□□ 0.28
PDP2-204ENST00000566543 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
PDP2-204ENST00000566543 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
PDP2-204ENST00000566543 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
PDP2-204ENST00000566543 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
PDP2-204ENST00000566543 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
PDP2-204ENST00000566543 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
PDP2-204ENST00000566543 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
PDP2-204ENST00000566543 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
PDP2-204ENST00000566543 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
PDP2-204ENST00000566543 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
PDP2-204ENST00000566543 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
PDP2-204ENST00000566543 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
PDP2-204ENST00000566543 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
PDP2-204ENST00000566543 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
PDP2-204ENST00000566543 CFTRP13569 1480 aa16.1■□□□□ 0.17
PDP2-204ENST00000566543 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
PDP2-204ENST00000566543 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
PDP2-204ENST00000566543 SYNJ1O43426 1573 aa16■□□□□ 0.15
PDP2-204ENST00000566543 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
PDP2-204ENST00000566543 EEA1Q15075 1411 aa15.98■□□□□ 0.15
PDP2-204ENST00000566543 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
PDP2-204ENST00000566543 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
PDP2-204ENST00000566543 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
PDP2-204ENST00000566543 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
PDP2-204ENST00000566543 SOGA1O94964 1423 aa15.89■□□□□ 0.13
PDP2-204ENST00000566543 CUX1P39880 1505 aa15.88■□□□□ 0.13
PDP2-204ENST00000566543 FANCD2Q9BXW9 1451 aa15.87■□□□□ 0.13
PDP2-204ENST00000566543 CSRNP3Q8WYN3 585 aa15.82■□□□□ 0.12
PDP2-204ENST00000566543 NESP48681 1621 aa15.82■□□□□ 0.12
PDP2-204ENST00000566543 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
PDP2-204ENST00000566543 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
PDP2-204ENST00000566543 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
PDP2-204ENST00000566543 FOXD1Q16676 465 aa15.76■□□□□ 0.11
PDP2-204ENST00000566543 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
PDP2-204ENST00000566543 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
PDP2-204ENST00000566543 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
PDP2-204ENST00000566543 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
PDP2-204ENST00000566543 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
PDP2-204ENST00000566543 KIF21BO75037 1637 aa15.72■□□□□ 0.11
PDP2-204ENST00000566543 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.11
PDP2-204ENST00000566543 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
PDP2-204ENST00000566543 TNIKQ9UKE5 1360 aa15.68■□□□□ 0.1
PDP2-204ENST00000566543 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
PDP2-204ENST00000566543 CUX2O14529 1486 aa15.65■□□□□ 0.1
PDP2-204ENST00000566543 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
PDP2-204ENST00000566543 POLA1P09884 1462 aaPredicted RBP15.62■□□□□ 0.09
PDP2-204ENST00000566543 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
PDP2-204ENST00000566543 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
PDP2-204ENST00000566543 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
PDP2-204ENST00000566543 PRXQ9BXM0 1461 aa15.59■□□□□ 0.09
PDP2-204ENST00000566543 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
PDP2-204ENST00000566543 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.09
PDP2-204ENST00000566543 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.08
PDP2-204ENST00000566543 RAD54L2Q9Y4B4 1467 aa15.55■□□□□ 0.08
PDP2-204ENST00000566543 IGF1RP08069 1367 aa15.51■□□□□ 0.07
PDP2-204ENST00000566543 ERCC6Q03468 1493 aa15.51■□□□□ 0.07
PDP2-204ENST00000566543 WDR97A6NE52 1622 aa15.49■□□□□ 0.07
PDP2-204ENST00000566543 CARMIL1Q5VZK9 1371 aa15.48■□□□□ 0.07
PDP2-204ENST00000566543 WDR62O43379 1518 aa15.48■□□□□ 0.07
PDP2-204ENST00000566543 CLIP1P30622 1438 aa15.47■□□□□ 0.07
PDP2-204ENST00000566543 ABCA5Q8WWZ7 1642 aa15.43■□□□□ 0.06
PDP2-204ENST00000566543 CUL7Q14999 1698 aa15.43■□□□□ 0.06
PDP2-204ENST00000566543 GAPVD1Q14C86 1478 aa15.42■□□□□ 0.06
PDP2-204ENST00000566543 TARBP1Q13395 1621 aaKnown RBP15.42■□□□□ 0.06
PDP2-204ENST00000566543 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
PDP2-204ENST00000566543 TDRD9Q8NDG6 1382 aaKnown RBP15.4■□□□□ 0.06
PDP2-204ENST00000566543 TRIM26Q12899 539 aaPredicted RBP15.39■□□□□ 0.05
PDP2-204ENST00000566543 THOC2Q8NI27 1593 aaKnown RBP15.38■□□□□ 0.05
PDP2-204ENST00000566543 PCGF6Q9BYE7 350 aa15.36■□□□□ 0.05
PDP2-204ENST00000566543 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
PDP2-204ENST00000566543 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.04
PDP2-204ENST00000566543 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
PDP2-204ENST00000566543 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
PDP2-204ENST00000566543 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDP2-204ENST00000566543 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
PDP2-204ENST00000566543 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms