RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 NISCHQ9Y2I1 1504 aa47■■■■■ 5.12
CCDC113-204ENST00000566498 CCDC180Q9P1Z9 1646 aa41.8■■■■■ 4.28
CCDC113-204ENST00000566498 ABCC9O60706 1549 aa41.31■■■■■ 4.2
CCDC113-204ENST00000566498 DCAF8L2P0C7V8 631 aa39.71■■■■□ 3.95
CCDC113-204ENST00000566498 RB1CC1Q8TDY2 1594 aa39.55■■■■□ 3.92
CCDC113-204ENST00000566498 NACADO15069 1562 aa39.43■■■■□ 3.9
CCDC113-204ENST00000566498 ZCCHC6Q5VYS8 1495 aaKnown RBP39.04■■■■□ 3.84
CCDC113-204ENST00000566498 MYO15BQ96JP2 1530 aa39.03■■■■□ 3.84
CCDC113-204ENST00000566498 DCAF1Q9Y4B6 1507 aa38.79■■■■□ 3.8
CCDC113-204ENST00000566498 PABPN1Q86U42 306 aaKnown RBP eCLIP38.66■■■■□ 3.78
CCDC113-204ENST00000566498 UNC13AQ9UPW8 1703 aa38.61■■■■□ 3.77
CCDC113-204ENST00000566498 BICRAQ9NZM4 1560 aa38.31■■■■□ 3.72
CCDC113-204ENST00000566498 SCRIBQ14160 1630 aa38.23■■■■□ 3.71
CCDC113-204ENST00000566498 DNAJC5BQ9UF47 199 aa38.18■■■■□ 3.7
CCDC113-204ENST00000566498 SHROOM4Q9ULL8 1493 aa37.82■■■■□ 3.64
CCDC113-204ENST00000566498 EIF4G1Q04637 1599 aaKnown RBP37.35■■■■□ 3.57
CCDC113-204ENST00000566498 CC2D2AQ9P2K1 1620 aa37.29■■■■□ 3.56
CCDC113-204ENST00000566498 CECR2Q9BXF3 1484 aa37.12■■■■□ 3.53
CCDC113-204ENST00000566498 SMARCA4P51532 1647 aa36.49■■■■□ 3.43
CCDC113-204ENST00000566498 BAZ1AQ9NRL2 1556 aaPredicted RBP36.44■■■■□ 3.42
CCDC113-204ENST00000566498 NCAPD3P42695 1498 aa36.41■■■■□ 3.42
CCDC113-204ENST00000566498 ATAD2BQ9ULI0 1458 aa36.4■■■■□ 3.42
CCDC113-204ENST00000566498 SMARCA2P51531 1590 aa36.33■■■■□ 3.41
CCDC113-204ENST00000566498 MROH2BQ7Z745 1585 aa36.23■■■■□ 3.39
CCDC113-204ENST00000566498 HMGXB3Q12766 1538 aa36.13■■■■□ 3.38
CCDC113-204ENST00000566498 BAZ1BQ9UIG0 1483 aaKnown RBP36.11■■■■□ 3.37
CCDC113-204ENST00000566498 PEG3Q9GZU2 1588 aa36.08■■■■□ 3.37
CCDC113-204ENST00000566498 WIZO95785 1651 aa35.84■■■■□ 3.33
CCDC113-204ENST00000566498 RSF1Q96T23 1441 aaPredicted RBP35.75■■■■□ 3.31
CCDC113-204ENST00000566498 NESP48681 1621 aa35.65■■■■□ 3.3
CCDC113-204ENST00000566498 ERCC6Q03468 1493 aa35.64■■■■□ 3.3
CCDC113-204ENST00000566498 LAMC3Q9Y6N6 1575 aa35.47■■■■□ 3.27
CCDC113-204ENST00000566498 TOP2AP11388 1531 aaKnown RBP35.39■■■■□ 3.26
CCDC113-204ENST00000566498 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.26
CCDC113-204ENST00000566498 PDS5BQ9NTI5 1447 aa35.32■■■■□ 3.24
CCDC113-204ENST00000566498 CUX2O14529 1486 aa35.25■■■■□ 3.23
CCDC113-204ENST00000566498 KIF21AQ7Z4S6 1674 aa35.17■■■■□ 3.22
CCDC113-204ENST00000566498 CFTRP13569 1480 aa35.07■■■■□ 3.2
CCDC113-204ENST00000566498 CCDC88BA6NC98 1476 aa35.06■■■■□ 3.2
CCDC113-204ENST00000566498 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
CCDC113-204ENST00000566498 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
CCDC113-204ENST00000566498 CEP164Q9UPV0 1460 aa34.93■■■■□ 3.18
CCDC113-204ENST00000566498 MRC2Q9UBG0 1479 aa34.91■■■■□ 3.18
CCDC113-204ENST00000566498 SUPT5HO00267 1087 aaKnown RBP34.89■■■■□ 3.18
CCDC113-204ENST00000566498 WDR62O43379 1518 aa34.75■■■■□ 3.15
CCDC113-204ENST00000566498 PRDM2Q13029 1718 aa34.72■■■■□ 3.15
CCDC113-204ENST00000566498 URB2Q14146 1524 aaKnown RBP34.6■■■■□ 3.13
CCDC113-204ENST00000566498 DNAJC5Q9H3Z4 198 aa34.59■■■■□ 3.13
CCDC113-204ENST00000566498 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
CCDC113-204ENST00000566498 TOPBP1Q92547 1522 aa34.35■■■■□ 3.09
CCDC113-204ENST00000566498 DNMBPQ6XZF7 1577 aa34.26■■■■□ 3.07
CCDC113-204ENST00000566498 IFT140Q96RY7 1462 aa34.2■■■■□ 3.06
CCDC113-204ENST00000566498 ZNF608Q9ULD9 1512 aaPredicted RBP34.08■■■■□ 3.05
CCDC113-204ENST00000566498 POLA1P09884 1462 aaPredicted RBP34.03■■■■□ 3.04
CCDC113-204ENST00000566498 CUX1P39880 1505 aa33.99■■■■□ 3.03
CCDC113-204ENST00000566498 SOGA1O94964 1423 aa33.99■■■■□ 3.03
CCDC113-204ENST00000566498 TARBP1Q13395 1621 aaKnown RBP33.96■■■■□ 3.03
CCDC113-204ENST00000566498 RAD54L2Q9Y4B4 1467 aa33.95■■■■□ 3.03
CCDC113-204ENST00000566498 FGD5Q6ZNL6 1462 aa33.94■■■■□ 3.02
CCDC113-204ENST00000566498 OSCARQ8IYS5 282 aa33.93■■■■□ 3.02
CCDC113-204ENST00000566498 AQRO60306 1485 aaKnown RBP eCLIP33.92■■■■□ 3.02
CCDC113-204ENST00000566498 EIF4G3O43432 1585 aaKnown RBP33.88■■■■□ 3.01
CCDC113-204ENST00000566498 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
CCDC113-204ENST00000566498 WRNQ14191 1432 aaPredicted RBP eCLIP33.73■■■□□ 2.99
CCDC113-204ENST00000566498 FBLN2P98095 1184 aa33.71■■■□□ 2.99
CCDC113-204ENST00000566498 WDR97A6NE52 1622 aa33.62■■■□□ 2.97
CCDC113-204ENST00000566498 TOP2BQ02880 1626 aa33.62■■■□□ 2.97
CCDC113-204ENST00000566498 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
CCDC113-204ENST00000566498 BIVM-ERCC5R4GMW8 1640 aa33.59■■■□□ 2.97
CCDC113-204ENST00000566498 ABCA10Q8WWZ4 1543 aa33.56■■■□□ 2.96
CCDC113-204ENST00000566498 GRIN2BQ13224 1484 aa33.56■■■□□ 2.96
CCDC113-204ENST00000566498 GAPVD1Q14C86 1478 aa33.55■■■□□ 2.96
CCDC113-204ENST00000566498 SNAPC4Q5SXM2 1469 aa33.53■■■□□ 2.96
CCDC113-204ENST00000566498 CHD1O14646 1710 aa33.53■■■□□ 2.96
CCDC113-204ENST00000566498 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
CCDC113-204ENST00000566498 TRIM41Q8WV44 630 aa33.46■■■□□ 2.95
CCDC113-204ENST00000566498 MAGI1Q96QZ7 1491 aaPredicted RBP33.45■■■□□ 2.95
CCDC113-204ENST00000566498 PBRM1Q86U86 1689 aa33.42■■■□□ 2.94
CCDC113-204ENST00000566498 ABCA5Q8WWZ7 1642 aa33.4■■■□□ 2.94
CCDC113-204ENST00000566498 SYNJ2O15056 1496 aa33.35■■■□□ 2.93
CCDC113-204ENST00000566498 RIMBP3CA6NJZ7 1639 aa33.25■■■□□ 2.91
CCDC113-204ENST00000566498 RIMBP3BA6NNM3 1639 aa33.25■■■□□ 2.91
CCDC113-204ENST00000566498 RIMBP3Q9UFD9 1639 aa33.25■■■□□ 2.91
CCDC113-204ENST00000566498 ARHGEF11O15085 1522 aa33.23■■■□□ 2.91
CCDC113-204ENST00000566498 ERICH3Q5RHP9 1530 aa33.16■■■□□ 2.9
CCDC113-204ENST00000566498 FHAD1B1AJZ9 1412 aa33.13■■■□□ 2.89
CCDC113-204ENST00000566498 CYB5RLQ6IPT4 315 aa33.13■■■□□ 2.89
CCDC113-204ENST00000566498 ADAMTS12P58397 1594 aa33.11■■■□□ 2.89
CCDC113-204ENST00000566498 CLASP1Q7Z460 1538 aa33.11■■■□□ 2.89
CCDC113-204ENST00000566498 GRIN2AQ12879 1464 aa33.11■■■□□ 2.89
CCDC113-204ENST00000566498 KIF27Q86VH2 1401 aa33.07■■■□□ 2.88
CCDC113-204ENST00000566498 IGF1RP08069 1367 aa32.98■■■□□ 2.87
CCDC113-204ENST00000566498 NUP160Q12769 1436 aa32.94■■■□□ 2.86
CCDC113-204ENST00000566498 ARAP1Q96P48 1450 aa32.93■■■□□ 2.86
CCDC113-204ENST00000566498 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
CCDC113-204ENST00000566498 CUL7Q14999 1698 aa32.8■■■□□ 2.84
CCDC113-204ENST00000566498 CARMIL1Q5VZK9 1371 aa32.8■■■□□ 2.84
CCDC113-204ENST00000566498 JPH4Q96JJ6 628 aa32.77■■■□□ 2.84
CCDC113-204ENST00000566498 RUSC2Q8N2Y8 1516 aa32.71■■■□□ 2.83
CCDC113-204ENST00000566498 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms