RNA–Protein interactions for RNA: ENST00000566479.5

ULK3-212, Transcript of unc-51 like kinase 3, humanhuman

TSL 1 (best)

Gene ULK3, Length 2,715 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK3-212ENST00000566479 NISCHQ9Y2I1 1504 aa38.29■■■■□ 3.72
ULK3-212ENST00000566479 CCDC180Q9P1Z9 1646 aa33.03■■■□□ 2.88
ULK3-212ENST00000566479 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
ULK3-212ENST00000566479 ZCCHC6Q5VYS8 1495 aaKnown RBP32.14■■■□□ 2.74
ULK3-212ENST00000566479 SHROOM4Q9ULL8 1493 aa31.96■■■□□ 2.71
ULK3-212ENST00000566479 ABCC9O60706 1549 aa31.76■■■□□ 2.67
ULK3-212ENST00000566479 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
ULK3-212ENST00000566479 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
ULK3-212ENST00000566479 MYO15BQ96JP2 1530 aa30.84■■■□□ 2.53
ULK3-212ENST00000566479 NACADO15069 1562 aa30.82■■■□□ 2.52
ULK3-212ENST00000566479 SUPT5HO00267 1087 aaKnown RBP30.77■■■□□ 2.52
ULK3-212ENST00000566479 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
ULK3-212ENST00000566479 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
ULK3-212ENST00000566479 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
ULK3-212ENST00000566479 CECR2Q9BXF3 1484 aa30.02■■■□□ 2.4
ULK3-212ENST00000566479 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
ULK3-212ENST00000566479 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
ULK3-212ENST00000566479 MROH2BQ7Z745 1585 aa29.76■■■□□ 2.35
ULK3-212ENST00000566479 WIZO95785 1651 aa29.55■■■□□ 2.32
ULK3-212ENST00000566479 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
ULK3-212ENST00000566479 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
ULK3-212ENST00000566479 CHIC1Q5VXU3 224 aa29.28■■■□□ 2.28
ULK3-212ENST00000566479 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
ULK3-212ENST00000566479 ATAD2BQ9ULI0 1458 aa28.95■■■□□ 2.22
ULK3-212ENST00000566479 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
ULK3-212ENST00000566479 CCDC88BA6NC98 1476 aa28.89■■■□□ 2.22
ULK3-212ENST00000566479 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
ULK3-212ENST00000566479 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
ULK3-212ENST00000566479 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
ULK3-212ENST00000566479 TRIM41Q8WV44 630 aa28.68■■■□□ 2.18
ULK3-212ENST00000566479 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
ULK3-212ENST00000566479 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
ULK3-212ENST00000566479 FAM9AQ8IZU1 332 aaPredicted RBP28.5■■■□□ 2.15
ULK3-212ENST00000566479 ABCC8Q09428 1581 aa28.5■■■□□ 2.15
ULK3-212ENST00000566479 LOC105371045A0A1W2PR82 267 aa28.45■■■□□ 2.15
ULK3-212ENST00000566479 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
ULK3-212ENST00000566479 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
ULK3-212ENST00000566479 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
ULK3-212ENST00000566479 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
ULK3-212ENST00000566479 SYNJ1O43426 1573 aa28.02■■■□□ 2.08
ULK3-212ENST00000566479 CFTRP13569 1480 aa28.01■■■□□ 2.07
ULK3-212ENST00000566479 SOGA1O94964 1423 aa27.99■■■□□ 2.07
ULK3-212ENST00000566479 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.07
ULK3-212ENST00000566479 NESP48681 1621 aa27.95■■■□□ 2.06
ULK3-212ENST00000566479 RUSC2Q8N2Y8 1516 aa27.95■■■□□ 2.06
ULK3-212ENST00000566479 CUX1P39880 1505 aa27.77■■■□□ 2.04
ULK3-212ENST00000566479 TOP2BQ02880 1626 aa27.72■■■□□ 2.03
ULK3-212ENST00000566479 FANCD2Q9BXW9 1451 aa27.68■■■□□ 2.02
ULK3-212ENST00000566479 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
ULK3-212ENST00000566479 PRDM2Q13029 1718 aa27.67■■■□□ 2.02
ULK3-212ENST00000566479 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
ULK3-212ENST00000566479 UBTFP17480 764 aaKnown RBP27.51■■□□□ 1.99
ULK3-212ENST00000566479 LAMC3Q9Y6N6 1575 aa27.51■■□□□ 1.99
ULK3-212ENST00000566479 EEA1Q15075 1411 aa27.46■■□□□ 1.99
ULK3-212ENST00000566479 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
ULK3-212ENST00000566479 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
ULK3-212ENST00000566479 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
ULK3-212ENST00000566479 KIF21AQ7Z4S6 1674 aa27.41■■□□□ 1.98
ULK3-212ENST00000566479 PDS5BQ9NTI5 1447 aa27.39■■□□□ 1.97
ULK3-212ENST00000566479 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
ULK3-212ENST00000566479 TOPBP1Q92547 1522 aa27.38■■□□□ 1.97
ULK3-212ENST00000566479 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
ULK3-212ENST00000566479 CUX2O14529 1486 aa27.34■■□□□ 1.97
ULK3-212ENST00000566479 RAPGEF2Q9Y4G8 1499 aa27.34■■□□□ 1.97
ULK3-212ENST00000566479 PPARGC1BQ86YN6 1023 aaKnown RBP27.32■■□□□ 1.96
ULK3-212ENST00000566479 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
ULK3-212ENST00000566479 KIF27Q86VH2 1401 aa27.3■■□□□ 1.96
ULK3-212ENST00000566479 POLA1P09884 1462 aaPredicted RBP27.3■■□□□ 1.96
ULK3-212ENST00000566479 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
ULK3-212ENST00000566479 CEP162Q5TB80 1403 aa27.25■■□□□ 1.95
ULK3-212ENST00000566479 TNIKQ9UKE5 1360 aa27.23■■□□□ 1.95
ULK3-212ENST00000566479 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
ULK3-212ENST00000566479 KIF21BO75037 1637 aa27.18■■□□□ 1.94
ULK3-212ENST00000566479 IGF1RP08069 1367 aa27.16■■□□□ 1.94
ULK3-212ENST00000566479 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
ULK3-212ENST00000566479 PRXQ9BXM0 1461 aa27.14■■□□□ 1.93
ULK3-212ENST00000566479 TTBK1Q5TCY1 1321 aaPredicted RBP27.12■■□□□ 1.93
ULK3-212ENST00000566479 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
ULK3-212ENST00000566479 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
ULK3-212ENST00000566479 MRC2Q9UBG0 1479 aa27.03■■□□□ 1.92
ULK3-212ENST00000566479 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
ULK3-212ENST00000566479 CLIP1P30622 1438 aa26.99■■□□□ 1.91
ULK3-212ENST00000566479 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.9
ULK3-212ENST00000566479 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.93e-7■■■■■ 42.5
ULK3-212ENST00000566479 WDR97A6NE52 1622 aa26.91■■□□□ 1.9
ULK3-212ENST00000566479 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
ULK3-212ENST00000566479 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
ULK3-212ENST00000566479 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
ULK3-212ENST00000566479 TRIM26Q12899 539 aaPredicted RBP26.85■■□□□ 1.89
ULK3-212ENST00000566479 WDR62O43379 1518 aa26.84■■□□□ 1.89
ULK3-212ENST00000566479 ABCA5Q8WWZ7 1642 aa26.82■■□□□ 1.88
ULK3-212ENST00000566479 THOC2Q8NI27 1593 aaKnown RBP26.79■■□□□ 1.88
ULK3-212ENST00000566479 P3H3Q8IVL6 736 aa26.78■■□□□ 1.88
ULK3-212ENST00000566479 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
ULK3-212ENST00000566479 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
ULK3-212ENST00000566479 ARHGAP35Q9NRY4 1499 aa26.68■■□□□ 1.86
ULK3-212ENST00000566479 VPS8Q8N3P4 1428 aa26.68■■□□□ 1.86
ULK3-212ENST00000566479 CUL7Q14999 1698 aa26.66■■□□□ 1.86
ULK3-212ENST00000566479 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
ULK3-212ENST00000566479 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms