RNA–Protein interactions for RNA: ENST00000565970.5

SCAPER-216, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-216ENST00000565970 NISCHQ9Y2I1 1504 aa38.76■■■■□ 3.8
SCAPER-216ENST00000565970 CCDC180Q9P1Z9 1646 aa33.78■■■■□ 3
SCAPER-216ENST00000565970 ZCCHC6Q5VYS8 1495 aaKnown RBP32.51■■■□□ 2.79
SCAPER-216ENST00000565970 ABCC9O60706 1549 aa32.32■■■□□ 2.76
SCAPER-216ENST00000565970 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.76
SCAPER-216ENST00000565970 DCAF1Q9Y4B6 1507 aa31.94■■■□□ 2.7
SCAPER-216ENST00000565970 SHROOM4Q9ULL8 1493 aa31.69■■■□□ 2.66
SCAPER-216ENST00000565970 MYO15BQ96JP2 1530 aa31.61■■■□□ 2.65
SCAPER-216ENST00000565970 NACADO15069 1562 aa31.54■■■□□ 2.64
SCAPER-216ENST00000565970 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
SCAPER-216ENST00000565970 SCRIBQ14160 1630 aa31.2■■■□□ 2.59
SCAPER-216ENST00000565970 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
SCAPER-216ENST00000565970 PABPN1Q86U42 306 aaKnown RBP eCLIP30.51■■■□□ 2.47
SCAPER-216ENST00000565970 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
SCAPER-216ENST00000565970 SUPT5HO00267 1087 aaKnown RBP30.37■■■□□ 2.45
SCAPER-216ENST00000565970 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
SCAPER-216ENST00000565970 RSF1Q96T23 1441 aaPredicted RBP30.04■■■□□ 2.4
SCAPER-216ENST00000565970 MROH2BQ7Z745 1585 aa30■■■□□ 2.39
SCAPER-216ENST00000565970 BAZ1AQ9NRL2 1556 aaPredicted RBP29.91■■■□□ 2.38
SCAPER-216ENST00000565970 SMARCA4P51532 1647 aa29.83■■■□□ 2.37
SCAPER-216ENST00000565970 WIZO95785 1651 aa29.75■■■□□ 2.35
SCAPER-216ENST00000565970 EIF4G1Q04637 1599 aaKnown RBP29.54■■■□□ 2.32
SCAPER-216ENST00000565970 ATAD2BQ9ULI0 1458 aa29.41■■■□□ 2.3
SCAPER-216ENST00000565970 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
SCAPER-216ENST00000565970 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
SCAPER-216ENST00000565970 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
SCAPER-216ENST00000565970 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
SCAPER-216ENST00000565970 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
SCAPER-216ENST00000565970 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
SCAPER-216ENST00000565970 CCDC88BA6NC98 1476 aa29.12■■■□□ 2.25
SCAPER-216ENST00000565970 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
SCAPER-216ENST00000565970 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
SCAPER-216ENST00000565970 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
SCAPER-216ENST00000565970 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
SCAPER-216ENST00000565970 ABCC8Q09428 1581 aa28.49■■■□□ 2.15
SCAPER-216ENST00000565970 CFTRP13569 1480 aa28.47■■■□□ 2.15
SCAPER-216ENST00000565970 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
SCAPER-216ENST00000565970 NESP48681 1621 aa28.33■■■□□ 2.13
SCAPER-216ENST00000565970 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.11
SCAPER-216ENST00000565970 PRDM2Q13029 1718 aa28.22■■■□□ 2.11
SCAPER-216ENST00000565970 SYNJ1O43426 1573 aa28.18■■■□□ 2.1
SCAPER-216ENST00000565970 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
SCAPER-216ENST00000565970 FANCD2Q9BXW9 1451 aa28.12■■■□□ 2.09
SCAPER-216ENST00000565970 FAM9AQ8IZU1 332 aaPredicted RBP28.09■■■□□ 2.09
SCAPER-216ENST00000565970 CUX1P39880 1505 aa28.05■■■□□ 2.08
SCAPER-216ENST00000565970 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
SCAPER-216ENST00000565970 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
SCAPER-216ENST00000565970 BIVM-ERCC5R4GMW8 1640 aa27.97■■■□□ 2.07
SCAPER-216ENST00000565970 CEP164Q9UPV0 1460 aa27.94■■■□□ 2.06
SCAPER-216ENST00000565970 SOGA1O94964 1423 aa27.93■■■□□ 2.06
SCAPER-216ENST00000565970 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
SCAPER-216ENST00000565970 LOC105371045A0A1W2PR82 267 aa27.91■■■□□ 2.06
SCAPER-216ENST00000565970 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
SCAPER-216ENST00000565970 URB2Q14146 1524 aaKnown RBP27.81■■■□□ 2.04
SCAPER-216ENST00000565970 TOPBP1Q92547 1522 aa27.8■■■□□ 2.04
SCAPER-216ENST00000565970 DNMBPQ6XZF7 1577 aa27.79■■■□□ 2.04
SCAPER-216ENST00000565970 EHMT2Q96KQ7 1210 aa27.78■■■□□ 2.04
SCAPER-216ENST00000565970 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.04
SCAPER-216ENST00000565970 ERCC6Q03468 1493 aa27.67■■■□□ 2.02
SCAPER-216ENST00000565970 CSRNP3Q8WYN3 585 aa27.66■■■□□ 2.02
SCAPER-216ENST00000565970 EEA1Q15075 1411 aa27.66■■■□□ 2.02
SCAPER-216ENST00000565970 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
SCAPER-216ENST00000565970 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.02
SCAPER-216ENST00000565970 RAD54L2Q9Y4B4 1467 aa27.62■■■□□ 2.01
SCAPER-216ENST00000565970 CUX2O14529 1486 aa27.56■■■□□ 2
SCAPER-216ENST00000565970 KIF27Q86VH2 1401 aa27.54■■■□□ 2
SCAPER-216ENST00000565970 WDR62O43379 1518 aa27.49■■□□□ 1.99
SCAPER-216ENST00000565970 THOC2Q8NI27 1593 aaKnown RBP27.47■■□□□ 1.99
SCAPER-216ENST00000565970 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
SCAPER-216ENST00000565970 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
SCAPER-216ENST00000565970 WDR97A6NE52 1622 aa27.38■■□□□ 1.97
SCAPER-216ENST00000565970 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
SCAPER-216ENST00000565970 IGF1RP08069 1367 aa27.37■■□□□ 1.97
SCAPER-216ENST00000565970 KIF21BO75037 1637 aa27.35■■□□□ 1.97
SCAPER-216ENST00000565970 GOLGA3Q08378 1498 aa27.34■■□□□ 1.97
SCAPER-216ENST00000565970 RAPGEF2Q9Y4G8 1499 aa27.34■■□□□ 1.97
SCAPER-216ENST00000565970 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
SCAPER-216ENST00000565970 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
SCAPER-216ENST00000565970 IFT140Q96RY7 1462 aa27.26■■□□□ 1.95
SCAPER-216ENST00000565970 ABCA5Q8WWZ7 1642 aa27.26■■□□□ 1.95
SCAPER-216ENST00000565970 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
SCAPER-216ENST00000565970 AQRO60306 1485 aaKnown RBP eCLIP27.23■■□□□ 1.95
SCAPER-216ENST00000565970 TNIKQ9UKE5 1360 aa27.23■■□□□ 1.95
SCAPER-216ENST00000565970 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
SCAPER-216ENST00000565970 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
SCAPER-216ENST00000565970 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
SCAPER-216ENST00000565970 CEP162Q5TB80 1403 aa27.11■■□□□ 1.93
SCAPER-216ENST00000565970 RANGAP1P46060 587 aaPredicted RBP27.07■■□□□ 1.92
SCAPER-216ENST00000565970 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
SCAPER-216ENST00000565970 CUL7Q14999 1698 aa27.06■■□□□ 1.92
SCAPER-216ENST00000565970 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
SCAPER-216ENST00000565970 GRIN2BQ13224 1484 aa27.04■■□□□ 1.92
SCAPER-216ENST00000565970 CLIP1P30622 1438 aa26.94■■□□□ 1.9
SCAPER-216ENST00000565970 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
SCAPER-216ENST00000565970 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
SCAPER-216ENST00000565970 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
SCAPER-216ENST00000565970 MAGI1Q96QZ7 1491 aaPredicted RBP26.8■■□□□ 1.88
SCAPER-216ENST00000565970 CTTNBP2Q8WZ74 1663 aa26.76■■□□□ 1.87
SCAPER-216ENST00000565970 FBLN2P98095 1184 aa26.76■■□□□ 1.87
SCAPER-216ENST00000565970 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms