RNA–Protein interactions for RNA: ENST00000565954.1

CCDC187-202, Transcript of coiled-coil domain containing 187, humanhuman

TSL 2

Gene CCDC187, Length 1,802 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-202ENST00000565954 NISCHQ9Y2I1 1504 aa44.42■■■■■ 4.7
CCDC187-202ENST00000565954 CCDC180Q9P1Z9 1646 aa38.92■■■■□ 3.82
CCDC187-202ENST00000565954 ABCC9O60706 1549 aa37.29■■■■□ 3.56
CCDC187-202ENST00000565954 ZCCHC6Q5VYS8 1495 aaKnown RBP37.21■■■■□ 3.55
CCDC187-202ENST00000565954 DCAF8L2P0C7V8 631 aa36.93■■■■□ 3.5
CCDC187-202ENST00000565954 DCAF1Q9Y4B6 1507 aa36.67■■■■□ 3.46
CCDC187-202ENST00000565954 MYO15BQ96JP2 1530 aa36.4■■■■□ 3.42
CCDC187-202ENST00000565954 NACADO15069 1562 aa36.37■■■■□ 3.41
CCDC187-202ENST00000565954 RB1CC1Q8TDY2 1594 aa36.18■■■■□ 3.38
CCDC187-202ENST00000565954 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
CCDC187-202ENST00000565954 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
CCDC187-202ENST00000565954 UNC13AQ9UPW8 1703 aa35.46■■■■□ 3.27
CCDC187-202ENST00000565954 BICRAQ9NZM4 1560 aa35.1■■■■□ 3.21
CCDC187-202ENST00000565954 PABPN1Q86U42 306 aaKnown RBP eCLIP35.1■■■■□ 3.21
CCDC187-202ENST00000565954 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
CCDC187-202ENST00000565954 SUPT5HO00267 1087 aaKnown RBP34.4■■■■□ 3.1
CCDC187-202ENST00000565954 BAZ1AQ9NRL2 1556 aaPredicted RBP34.33■■■■□ 3.09
CCDC187-202ENST00000565954 MROH2BQ7Z745 1585 aa34.32■■■■□ 3.08
CCDC187-202ENST00000565954 RSF1Q96T23 1441 aaPredicted RBP34.28■■■■□ 3.08
CCDC187-202ENST00000565954 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
CCDC187-202ENST00000565954 EIF4G1Q04637 1599 aaKnown RBP34.09■■■■□ 3.05
CCDC187-202ENST00000565954 WIZO95785 1651 aa34.03■■■■□ 3.04
CCDC187-202ENST00000565954 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
CCDC187-202ENST00000565954 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
CCDC187-202ENST00000565954 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
CCDC187-202ENST00000565954 CC2D2AQ9P2K1 1620 aa33.72■■■□□ 2.99
CCDC187-202ENST00000565954 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
CCDC187-202ENST00000565954 BAZ1BQ9UIG0 1483 aaKnown RBP33.6■■■□□ 2.97
CCDC187-202ENST00000565954 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
CCDC187-202ENST00000565954 HMGXB3Q12766 1538 aa33.47■■■□□ 2.95
CCDC187-202ENST00000565954 DNAJC5BQ9UF47 199 aa33.46■■■□□ 2.95
CCDC187-202ENST00000565954 CCDC88BA6NC98 1476 aa33.3■■■□□ 2.92
CCDC187-202ENST00000565954 CFTRP13569 1480 aa32.7■■■□□ 2.83
CCDC187-202ENST00000565954 CADPSQ9ULU8 1353 aa32.69■■■□□ 2.82
CCDC187-202ENST00000565954 CHIC1Q5VXU3 224 aa32.63■■■□□ 2.81
CCDC187-202ENST00000565954 NESP48681 1621 aa32.6■■■□□ 2.81
CCDC187-202ENST00000565954 PRDM2Q13029 1718 aa32.52■■■□□ 2.8
CCDC187-202ENST00000565954 LAMC3Q9Y6N6 1575 aa32.51■■■□□ 2.79
CCDC187-202ENST00000565954 ABCC8Q09428 1581 aa32.48■■■□□ 2.79
CCDC187-202ENST00000565954 TRIM41Q8WV44 630 aa32.35■■■□□ 2.77
CCDC187-202ENST00000565954 FANCD2Q9BXW9 1451 aa32.34■■■□□ 2.77
CCDC187-202ENST00000565954 WRNQ14191 1432 aaPredicted RBP eCLIP32.29■■■□□ 2.76
CCDC187-202ENST00000565954 PDS5BQ9NTI5 1447 aa32.28■■■□□ 2.76
CCDC187-202ENST00000565954 KIF21AQ7Z4S6 1674 aa32.19■■■□□ 2.74
CCDC187-202ENST00000565954 CEP164Q9UPV0 1460 aa32.19■■■□□ 2.74
CCDC187-202ENST00000565954 SYNJ1O43426 1573 aa32.19■■■□□ 2.74
CCDC187-202ENST00000565954 CUX1P39880 1505 aa32.11■■■□□ 2.73
CCDC187-202ENST00000565954 TOP2BQ02880 1626 aa32.07■■■□□ 2.72
CCDC187-202ENST00000565954 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
CCDC187-202ENST00000565954 ERCC6Q03468 1493 aa32.02■■■□□ 2.72
CCDC187-202ENST00000565954 URB2Q14146 1524 aaKnown RBP31.97■■■□□ 2.71
CCDC187-202ENST00000565954 DNMBPQ6XZF7 1577 aa31.95■■■□□ 2.71
CCDC187-202ENST00000565954 TOPBP1Q92547 1522 aa31.94■■■□□ 2.7
CCDC187-202ENST00000565954 MRC2Q9UBG0 1479 aa31.89■■■□□ 2.7
CCDC187-202ENST00000565954 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
CCDC187-202ENST00000565954 FAM9AQ8IZU1 332 aaPredicted RBP31.79■■■□□ 2.68
CCDC187-202ENST00000565954 SOGA1O94964 1423 aa31.76■■■□□ 2.67
CCDC187-202ENST00000565954 THOC2Q8NI27 1593 aaKnown RBP31.76■■■□□ 2.67
CCDC187-202ENST00000565954 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
CCDC187-202ENST00000565954 WDR62O43379 1518 aa31.73■■■□□ 2.67
CCDC187-202ENST00000565954 RUSC2Q8N2Y8 1516 aa31.68■■■□□ 2.66
CCDC187-202ENST00000565954 RAD54L2Q9Y4B4 1467 aa31.67■■■□□ 2.66
CCDC187-202ENST00000565954 CUX2O14529 1486 aa31.55■■■□□ 2.64
CCDC187-202ENST00000565954 EEA1Q15075 1411 aa31.54■■■□□ 2.64
CCDC187-202ENST00000565954 ABCA10Q8WWZ4 1543 aa31.52■■■□□ 2.64
CCDC187-202ENST00000565954 KIF27Q86VH2 1401 aa31.51■■■□□ 2.63
CCDC187-202ENST00000565954 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
CCDC187-202ENST00000565954 WDR97A6NE52 1622 aa31.47■■■□□ 2.63
CCDC187-202ENST00000565954 CSRNP3Q8WYN3 585 aa31.47■■■□□ 2.63
CCDC187-202ENST00000565954 IFT140Q96RY7 1462 aa31.43■■■□□ 2.62
CCDC187-202ENST00000565954 LOC105371045A0A1W2PR82 267 aa31.42■■■□□ 2.62
CCDC187-202ENST00000565954 TDRD9Q8NDG6 1382 aaKnown RBP31.41■■■□□ 2.62
CCDC187-202ENST00000565954 EHMT2Q96KQ7 1210 aa31.4■■■□□ 2.62
CCDC187-202ENST00000565954 ABCA5Q8WWZ7 1642 aa31.32■■■□□ 2.6
CCDC187-202ENST00000565954 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
CCDC187-202ENST00000565954 GAPVD1Q14C86 1478 aa31.29■■■□□ 2.6
CCDC187-202ENST00000565954 IGF1RP08069 1367 aa31.28■■■□□ 2.6
CCDC187-202ENST00000565954 AQRO60306 1485 aaKnown RBP eCLIP31.28■■■□□ 2.6
CCDC187-202ENST00000565954 EIF4G3O43432 1585 aaKnown RBP31.18■■■□□ 2.58
CCDC187-202ENST00000565954 KIF21BO75037 1637 aa31.18■■■□□ 2.58
CCDC187-202ENST00000565954 PRXQ9BXM0 1461 aa31.17■■■□□ 2.58
CCDC187-202ENST00000565954 PBRM1Q86U86 1689 aa31.15■■■□□ 2.58
CCDC187-202ENST00000565954 ERICH3Q5RHP9 1530 aa31.14■■■□□ 2.58
CCDC187-202ENST00000565954 RAPGEF2Q9Y4G8 1499 aa31.13■■■□□ 2.57
CCDC187-202ENST00000565954 CARMIL1Q5VZK9 1371 aa31.12■■■□□ 2.57
CCDC187-202ENST00000565954 GOLGA3Q08378 1498 aa31.12■■■□□ 2.57
CCDC187-202ENST00000565954 GRIN2BQ13224 1484 aa31.11■■■□□ 2.57
CCDC187-202ENST00000565954 CUL7Q14999 1698 aa31.07■■■□□ 2.56
CCDC187-202ENST00000565954 UBTFP17480 764 aaKnown RBP31.06■■■□□ 2.56
CCDC187-202ENST00000565954 SNAPC4Q5SXM2 1469 aa30.97■■■□□ 2.55
CCDC187-202ENST00000565954 ADAMTS12P58397 1594 aa30.94■■■□□ 2.54
CCDC187-202ENST00000565954 FHAD1B1AJZ9 1412 aa30.93■■■□□ 2.54
CCDC187-202ENST00000565954 TNIKQ9UKE5 1360 aa30.93■■■□□ 2.54
CCDC187-202ENST00000565954 MAGI1Q96QZ7 1491 aaPredicted RBP30.88■■■□□ 2.53
CCDC187-202ENST00000565954 FBLN2P98095 1184 aa30.78■■■□□ 2.52
CCDC187-202ENST00000565954 SYNJ2O15056 1496 aa30.77■■■□□ 2.52
CCDC187-202ENST00000565954 CHMP7Q8WUX9 453 aaPredicted RBP30.77■■■□□ 2.52
CCDC187-202ENST00000565954 RANGAP1P46060 587 aaPredicted RBP30.76■■■□□ 2.51
CCDC187-202ENST00000565954 CEP162Q5TB80 1403 aa30.75■■■□□ 2.51
CCDC187-202ENST00000565954 GRIN2AQ12879 1464 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms