RNA–Protein interactions for RNA: ENST00000565233.5

GRAMD2A-207, Transcript of GRAM domain containing 2A, humanhuman

TSL 2

Gene GRAMD2A, Length 1,024 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2A-207ENST00000565233 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
GRAMD2A-207ENST00000565233 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
GRAMD2A-207ENST00000565233 ABCC9O60706 1549 aa23.69■■□□□ 1.38
GRAMD2A-207ENST00000565233 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
GRAMD2A-207ENST00000565233 MYO15BQ96JP2 1530 aa23.22■■□□□ 1.31
GRAMD2A-207ENST00000565233 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
GRAMD2A-207ENST00000565233 NACADO15069 1562 aa23.15■■□□□ 1.3
GRAMD2A-207ENST00000565233 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
GRAMD2A-207ENST00000565233 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
GRAMD2A-207ENST00000565233 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.18
GRAMD2A-207ENST00000565233 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
GRAMD2A-207ENST00000565233 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
GRAMD2A-207ENST00000565233 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
GRAMD2A-207ENST00000565233 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
GRAMD2A-207ENST00000565233 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
GRAMD2A-207ENST00000565233 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
GRAMD2A-207ENST00000565233 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
GRAMD2A-207ENST00000565233 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
GRAMD2A-207ENST00000565233 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
GRAMD2A-207ENST00000565233 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
GRAMD2A-207ENST00000565233 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
GRAMD2A-207ENST00000565233 SMARCA2P51531 1590 aa21.38■■□□□ 1.01
GRAMD2A-207ENST00000565233 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
GRAMD2A-207ENST00000565233 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
GRAMD2A-207ENST00000565233 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
GRAMD2A-207ENST00000565233 HMGXB3Q12766 1538 aa21.28■■□□□ 1
GRAMD2A-207ENST00000565233 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
GRAMD2A-207ENST00000565233 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
GRAMD2A-207ENST00000565233 WIZO95785 1651 aa21.12■□□□□ 0.97
GRAMD2A-207ENST00000565233 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
GRAMD2A-207ENST00000565233 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
GRAMD2A-207ENST00000565233 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
GRAMD2A-207ENST00000565233 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
GRAMD2A-207ENST00000565233 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
GRAMD2A-207ENST00000565233 CFTRP13569 1480 aa20.65■□□□□ 0.9
GRAMD2A-207ENST00000565233 NESP48681 1621 aa20.57■□□□□ 0.88
GRAMD2A-207ENST00000565233 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
GRAMD2A-207ENST00000565233 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
GRAMD2A-207ENST00000565233 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
GRAMD2A-207ENST00000565233 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
GRAMD2A-207ENST00000565233 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
GRAMD2A-207ENST00000565233 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
GRAMD2A-207ENST00000565233 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
GRAMD2A-207ENST00000565233 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
GRAMD2A-207ENST00000565233 CUX2O14529 1486 aa20.27■□□□□ 0.84
GRAMD2A-207ENST00000565233 WDR62O43379 1518 aa20.27■□□□□ 0.83
GRAMD2A-207ENST00000565233 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
GRAMD2A-207ENST00000565233 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
GRAMD2A-207ENST00000565233 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
GRAMD2A-207ENST00000565233 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
GRAMD2A-207ENST00000565233 CUX1P39880 1505 aa20.05■□□□□ 0.8
GRAMD2A-207ENST00000565233 WRNQ14191 1432 aaPredicted RBP eCLIP20.04■□□□□ 0.8
GRAMD2A-207ENST00000565233 TOP2BQ02880 1626 aa20■□□□□ 0.79
GRAMD2A-207ENST00000565233 BIVM-ERCC5R4GMW8 1640 aa19.99■□□□□ 0.79
GRAMD2A-207ENST00000565233 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
GRAMD2A-207ENST00000565233 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
GRAMD2A-207ENST00000565233 FGD5Q6ZNL6 1462 aa19.93■□□□□ 0.78
GRAMD2A-207ENST00000565233 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
GRAMD2A-207ENST00000565233 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
GRAMD2A-207ENST00000565233 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
GRAMD2A-207ENST00000565233 SOGA1O94964 1423 aa19.88■□□□□ 0.77
GRAMD2A-207ENST00000565233 ABCA10Q8WWZ4 1543 aa19.84■□□□□ 0.77
GRAMD2A-207ENST00000565233 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
GRAMD2A-207ENST00000565233 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
GRAMD2A-207ENST00000565233 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
GRAMD2A-207ENST00000565233 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
GRAMD2A-207ENST00000565233 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
GRAMD2A-207ENST00000565233 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
GRAMD2A-207ENST00000565233 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
GRAMD2A-207ENST00000565233 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
GRAMD2A-207ENST00000565233 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
GRAMD2A-207ENST00000565233 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
GRAMD2A-207ENST00000565233 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
GRAMD2A-207ENST00000565233 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
GRAMD2A-207ENST00000565233 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
GRAMD2A-207ENST00000565233 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
GRAMD2A-207ENST00000565233 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
GRAMD2A-207ENST00000565233 EEA1Q15075 1411 aa19.51■□□□□ 0.71
GRAMD2A-207ENST00000565233 SYNJ2O15056 1496 aa19.51■□□□□ 0.71
GRAMD2A-207ENST00000565233 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
GRAMD2A-207ENST00000565233 IGF1RP08069 1367 aa19.49■□□□□ 0.71
GRAMD2A-207ENST00000565233 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
GRAMD2A-207ENST00000565233 CUL7Q14999 1698 aa19.48■□□□□ 0.71
GRAMD2A-207ENST00000565233 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
GRAMD2A-207ENST00000565233 CHD1O14646 1710 aa19.39■□□□□ 0.7
GRAMD2A-207ENST00000565233 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
GRAMD2A-207ENST00000565233 GRIN2AQ12879 1464 aa19.39■□□□□ 0.69
GRAMD2A-207ENST00000565233 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
GRAMD2A-207ENST00000565233 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
GRAMD2A-207ENST00000565233 NUP160Q12769 1436 aa19.34■□□□□ 0.69
GRAMD2A-207ENST00000565233 PRXQ9BXM0 1461 aa19.34■□□□□ 0.69
GRAMD2A-207ENST00000565233 RAPGEF2Q9Y4G8 1499 aa19.31■□□□□ 0.68
GRAMD2A-207ENST00000565233 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
GRAMD2A-207ENST00000565233 FBLN2P98095 1184 aa19.3■□□□□ 0.68
GRAMD2A-207ENST00000565233 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
GRAMD2A-207ENST00000565233 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
GRAMD2A-207ENST00000565233 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
GRAMD2A-207ENST00000565233 KIF21BO75037 1637 aa19.22■□□□□ 0.67
GRAMD2A-207ENST00000565233 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
GRAMD2A-207ENST00000565233 SHROOM2Q13796 1616 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms