RNA–Protein interactions for RNA: ENST00000565099.1

EIF3C-206, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 588 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-206ENST00000565099 NISCHQ9Y2I1 1504 aa19.32■□□□□ 0.68
EIF3C-206ENST00000565099 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
EIF3C-206ENST00000565099 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
EIF3C-206ENST00000565099 ABCC9O60706 1549 aa16.54■□□□□ 0.24
EIF3C-206ENST00000565099 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
EIF3C-206ENST00000565099 NACADO15069 1562 aa16.12■□□□□ 0.17
EIF3C-206ENST00000565099 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
EIF3C-206ENST00000565099 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
EIF3C-206ENST00000565099 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
EIF3C-206ENST00000565099 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
EIF3C-206ENST00000565099 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
EIF3C-206ENST00000565099 UNC13AQ9UPW8 1703 aa15.58■□□□□ 0.08
EIF3C-206ENST00000565099 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.08
EIF3C-206ENST00000565099 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
EIF3C-206ENST00000565099 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
EIF3C-206ENST00000565099 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
EIF3C-206ENST00000565099 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
EIF3C-206ENST00000565099 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
EIF3C-206ENST00000565099 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
EIF3C-206ENST00000565099 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
EIF3C-206ENST00000565099 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
EIF3C-206ENST00000565099 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
EIF3C-206ENST00000565099 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
EIF3C-206ENST00000565099 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
EIF3C-206ENST00000565099 ATAD2BQ9ULI0 1458 aa14.83□□□□□ -0.03
EIF3C-206ENST00000565099 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
EIF3C-206ENST00000565099 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
EIF3C-206ENST00000565099 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
EIF3C-206ENST00000565099 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
EIF3C-206ENST00000565099 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
EIF3C-206ENST00000565099 WIZO95785 1651 aa14.68□□□□□ -0.06
EIF3C-206ENST00000565099 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
EIF3C-206ENST00000565099 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
EIF3C-206ENST00000565099 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
EIF3C-206ENST00000565099 CADPSQ9ULU8 1353 aa14.41□□□□□ -0.1
EIF3C-206ENST00000565099 CCDC88BA6NC98 1476 aa14.39□□□□□ -0.11
EIF3C-206ENST00000565099 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
EIF3C-206ENST00000565099 ERCC6Q03468 1493 aa14.35□□□□□ -0.11
EIF3C-206ENST00000565099 CFTRP13569 1480 aa14.34□□□□□ -0.11
EIF3C-206ENST00000565099 NESP48681 1621 aa14.31□□□□□ -0.12
EIF3C-206ENST00000565099 PRDM2Q13029 1718 aa14.28□□□□□ -0.12
EIF3C-206ENST00000565099 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
EIF3C-206ENST00000565099 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
EIF3C-206ENST00000565099 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
EIF3C-206ENST00000565099 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
EIF3C-206ENST00000565099 KIF21AQ7Z4S6 1674 aa14.19□□□□□ -0.14
EIF3C-206ENST00000565099 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
EIF3C-206ENST00000565099 CUX2O14529 1486 aa14.16□□□□□ -0.14
EIF3C-206ENST00000565099 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
EIF3C-206ENST00000565099 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
EIF3C-206ENST00000565099 WDR62O43379 1518 aa14.1□□□□□ -0.15
EIF3C-206ENST00000565099 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
EIF3C-206ENST00000565099 PHF23Q9BUL5 403 aaPredicted RBP14.04□□□□□ -0.16
EIF3C-206ENST00000565099 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
EIF3C-206ENST00000565099 TOPBP1Q92547 1522 aa14□□□□□ -0.17
EIF3C-206ENST00000565099 WRNQ14191 1432 aaPredicted RBP eCLIP13.97□□□□□ -0.17
EIF3C-206ENST00000565099 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
EIF3C-206ENST00000565099 CUX1P39880 1505 aa13.92□□□□□ -0.18
EIF3C-206ENST00000565099 TOP2BQ02880 1626 aa13.91□□□□□ -0.18
EIF3C-206ENST00000565099 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
EIF3C-206ENST00000565099 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
EIF3C-206ENST00000565099 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
EIF3C-206ENST00000565099 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
EIF3C-206ENST00000565099 SOGA1O94964 1423 aa13.86□□□□□ -0.19
EIF3C-206ENST00000565099 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
EIF3C-206ENST00000565099 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
EIF3C-206ENST00000565099 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
EIF3C-206ENST00000565099 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
EIF3C-206ENST00000565099 EIF4G3O43432 1585 aaKnown RBP13.76□□□□□ -0.21
EIF3C-206ENST00000565099 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
EIF3C-206ENST00000565099 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
EIF3C-206ENST00000565099 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
EIF3C-206ENST00000565099 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
EIF3C-206ENST00000565099 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
EIF3C-206ENST00000565099 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
EIF3C-206ENST00000565099 ABCA5Q8WWZ7 1642 aa13.7□□□□□ -0.22
EIF3C-206ENST00000565099 KIF27Q86VH2 1401 aa13.7□□□□□ -0.22
EIF3C-206ENST00000565099 MAGI1Q96QZ7 1491 aaPredicted RBP13.68□□□□□ -0.22
EIF3C-206ENST00000565099 ERICH3Q5RHP9 1530 aa13.67□□□□□ -0.22
EIF3C-206ENST00000565099 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
EIF3C-206ENST00000565099 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
EIF3C-206ENST00000565099 EEA1Q15075 1411 aa13.61□□□□□ -0.23
EIF3C-206ENST00000565099 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
EIF3C-206ENST00000565099 CUL7Q14999 1698 aa13.59□□□□□ -0.23
EIF3C-206ENST00000565099 FHAD1B1AJZ9 1412 aa13.59□□□□□ -0.23
EIF3C-206ENST00000565099 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
EIF3C-206ENST00000565099 FBLN2P98095 1184 aa13.57□□□□□ -0.24
EIF3C-206ENST00000565099 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
EIF3C-206ENST00000565099 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
EIF3C-206ENST00000565099 IGF1RP08069 1367 aa13.53□□□□□ -0.24
EIF3C-206ENST00000565099 CHD1O14646 1710 aa13.53□□□□□ -0.24
EIF3C-206ENST00000565099 GRIN2AQ12879 1464 aa13.51□□□□□ -0.25
EIF3C-206ENST00000565099 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
EIF3C-206ENST00000565099 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
EIF3C-206ENST00000565099 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
EIF3C-206ENST00000565099 NUP160Q12769 1436 aa13.44□□□□□ -0.26
EIF3C-206ENST00000565099 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
EIF3C-206ENST00000565099 CLASP1Q7Z460 1538 aa13.41□□□□□ -0.26
EIF3C-206ENST00000565099 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
EIF3C-206ENST00000565099 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms