RNA–Protein interactions for RNA: ENST00000565075.5

RAB11A-204, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-204ENST00000565075 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
RAB11A-204ENST00000565075 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
RAB11A-204ENST00000565075 ABCC9O60706 1549 aa23.88■■□□□ 1.41
RAB11A-204ENST00000565075 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
RAB11A-204ENST00000565075 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
RAB11A-204ENST00000565075 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
RAB11A-204ENST00000565075 NACADO15069 1562 aa22.96■■□□□ 1.27
RAB11A-204ENST00000565075 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
RAB11A-204ENST00000565075 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
RAB11A-204ENST00000565075 UNC13AQ9UPW8 1703 aa22.56■■□□□ 1.2
RAB11A-204ENST00000565075 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
RAB11A-204ENST00000565075 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
RAB11A-204ENST00000565075 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.17
RAB11A-204ENST00000565075 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
RAB11A-204ENST00000565075 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
RAB11A-204ENST00000565075 DNAJC5BQ9UF47 199 aa21.7■■□□□ 1.06
RAB11A-204ENST00000565075 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
RAB11A-204ENST00000565075 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
RAB11A-204ENST00000565075 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.03
RAB11A-204ENST00000565075 SMARCA4P51532 1647 aa21.43■■□□□ 1.02
RAB11A-204ENST00000565075 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
RAB11A-204ENST00000565075 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
RAB11A-204ENST00000565075 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
RAB11A-204ENST00000565075 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
RAB11A-204ENST00000565075 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
RAB11A-204ENST00000565075 WIZO95785 1651 aa21.14■□□□□ 0.97
RAB11A-204ENST00000565075 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
RAB11A-204ENST00000565075 PEG3Q9GZU2 1588 aa21.13■□□□□ 0.97
RAB11A-204ENST00000565075 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
RAB11A-204ENST00000565075 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
RAB11A-204ENST00000565075 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
RAB11A-204ENST00000565075 TOP2AP11388 1531 aaKnown RBP20.87■□□□□ 0.93
RAB11A-204ENST00000565075 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
RAB11A-204ENST00000565075 NESP48681 1621 aa20.7■□□□□ 0.9
RAB11A-204ENST00000565075 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
RAB11A-204ENST00000565075 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
RAB11A-204ENST00000565075 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
RAB11A-204ENST00000565075 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
RAB11A-204ENST00000565075 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
RAB11A-204ENST00000565075 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
RAB11A-204ENST00000565075 CFTRP13569 1480 aa20.46■□□□□ 0.87
RAB11A-204ENST00000565075 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
RAB11A-204ENST00000565075 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
RAB11A-204ENST00000565075 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
RAB11A-204ENST00000565075 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
RAB11A-204ENST00000565075 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.84
RAB11A-204ENST00000565075 CUX2O14529 1486 aa20.21■□□□□ 0.83
RAB11A-204ENST00000565075 WDR62O43379 1518 aa20.18■□□□□ 0.82
RAB11A-204ENST00000565075 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
RAB11A-204ENST00000565075 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
RAB11A-204ENST00000565075 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
RAB11A-204ENST00000565075 ABCC8Q09428 1581 aa20.02■□□□□ 0.8
RAB11A-204ENST00000565075 CUX1P39880 1505 aa19.99■□□□□ 0.79
RAB11A-204ENST00000565075 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
RAB11A-204ENST00000565075 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
RAB11A-204ENST00000565075 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
RAB11A-204ENST00000565075 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
RAB11A-204ENST00000565075 IFT140Q96RY7 1462 aa19.88■□□□□ 0.77
RAB11A-204ENST00000565075 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
RAB11A-204ENST00000565075 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
RAB11A-204ENST00000565075 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
RAB11A-204ENST00000565075 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
RAB11A-204ENST00000565075 SOGA1O94964 1423 aa19.82■□□□□ 0.76
RAB11A-204ENST00000565075 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
RAB11A-204ENST00000565075 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
RAB11A-204ENST00000565075 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
RAB11A-204ENST00000565075 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.759e-9■■■■□ 19.4
RAB11A-204ENST00000565075 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
RAB11A-204ENST00000565075 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
RAB11A-204ENST00000565075 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
RAB11A-204ENST00000565075 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
RAB11A-204ENST00000565075 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
RAB11A-204ENST00000565075 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
RAB11A-204ENST00000565075 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
RAB11A-204ENST00000565075 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
RAB11A-204ENST00000565075 CHD1O14646 1710 aa19.55■□□□□ 0.72
RAB11A-204ENST00000565075 FBLN2P98095 1184 aa19.51■□□□□ 0.71
RAB11A-204ENST00000565075 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
RAB11A-204ENST00000565075 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
RAB11A-204ENST00000565075 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
RAB11A-204ENST00000565075 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
RAB11A-204ENST00000565075 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
RAB11A-204ENST00000565075 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
RAB11A-204ENST00000565075 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
RAB11A-204ENST00000565075 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
RAB11A-204ENST00000565075 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
RAB11A-204ENST00000565075 FHAD1B1AJZ9 1412 aa19.36■□□□□ 0.69
RAB11A-204ENST00000565075 CUL7Q14999 1698 aa19.34■□□□□ 0.69
RAB11A-204ENST00000565075 IGF1RP08069 1367 aa19.33■□□□□ 0.69
RAB11A-204ENST00000565075 GRIN2AQ12879 1464 aa19.32■□□□□ 0.68
RAB11A-204ENST00000565075 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
RAB11A-204ENST00000565075 CEP170Q5SW79 1584 aa19.24■□□□□ 0.67
RAB11A-204ENST00000565075 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
RAB11A-204ENST00000565075 CLASP1Q7Z460 1538 aa19.23■□□□□ 0.67
RAB11A-204ENST00000565075 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
RAB11A-204ENST00000565075 NUP160Q12769 1436 aa19.19■□□□□ 0.66
RAB11A-204ENST00000565075 EEA1Q15075 1411 aa19.17■□□□□ 0.66
RAB11A-204ENST00000565075 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
RAB11A-204ENST00000565075 RIMBP3CA6NJZ7 1639 aa19.15■□□□□ 0.66
RAB11A-204ENST00000565075 RIMBP3BA6NNM3 1639 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms