RNA–Protein interactions for RNA: ENST00000565018.6

TCF4-226, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-226ENST00000565018 NISCHQ9Y2I1 1504 aa20.1■□□□□ 0.81
TCF4-226ENST00000565018 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
TCF4-226ENST00000565018 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
TCF4-226ENST00000565018 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
TCF4-226ENST00000565018 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.23
TCF4-226ENST00000565018 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
TCF4-226ENST00000565018 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
TCF4-226ENST00000565018 NACADO15069 1562 aa16.13■□□□□ 0.17
TCF4-226ENST00000565018 ABCC9O60706 1549 aa16.05■□□□□ 0.16
TCF4-226ENST00000565018 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
TCF4-226ENST00000565018 SCRIBQ14160 1630 aa15.96■□□□□ 0.14
TCF4-226ENST00000565018 RB1CC1Q8TDY2 1594 aa15.89■□□□□ 0.13
TCF4-226ENST00000565018 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
TCF4-226ENST00000565018 CHIC1Q5VXU3 224 aa15.57■□□□□ 0.08
TCF4-226ENST00000565018 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
TCF4-226ENST00000565018 CECR2Q9BXF3 1484 aa15.55■□□□□ 0.08
TCF4-226ENST00000565018 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
TCF4-226ENST00000565018 BAZ1AQ9NRL2 1556 aaPredicted RBP15.5■□□□□ 0.07
TCF4-226ENST00000565018 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
TCF4-226ENST00000565018 WIZO95785 1651 aa15.39■□□□□ 0.05
TCF4-226ENST00000565018 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
TCF4-226ENST00000565018 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
TCF4-226ENST00000565018 PEG3Q9GZU2 1588 aa15.25■□□□□ 0.03
TCF4-226ENST00000565018 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
TCF4-226ENST00000565018 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
TCF4-226ENST00000565018 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
TCF4-226ENST00000565018 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
TCF4-226ENST00000565018 TRIM41Q8WV44 630 aa15.07■□□□□ 0
TCF4-226ENST00000565018 ATAD2BQ9ULI0 1458 aa15.05■□□□□ -0
TCF4-226ENST00000565018 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
TCF4-226ENST00000565018 LOC105371045A0A1W2PR82 267 aa14.91□□□□□ -0.02
TCF4-226ENST00000565018 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
TCF4-226ENST00000565018 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
TCF4-226ENST00000565018 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
TCF4-226ENST00000565018 EEA1Q15075 1411 aa14.77□□□□□ -0.04
TCF4-226ENST00000565018 WRNQ14191 1432 aaPredicted RBP eCLIP14.76□□□□□ -0.05
TCF4-226ENST00000565018 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
TCF4-226ENST00000565018 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
TCF4-226ENST00000565018 SOGA1O94964 1423 aa14.65□□□□□ -0.06
TCF4-226ENST00000565018 CFTRP13569 1480 aa14.64□□□□□ -0.07
TCF4-226ENST00000565018 TOP2BQ02880 1626 aa14.63□□□□□ -0.07
TCF4-226ENST00000565018 BIVM-ERCC5R4GMW8 1640 aa14.62□□□□□ -0.07
TCF4-226ENST00000565018 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
TCF4-226ENST00000565018 PRDM2Q13029 1718 aa14.59□□□□□ -0.07
TCF4-226ENST00000565018 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
TCF4-226ENST00000565018 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
TCF4-226ENST00000565018 PCGF6Q9BYE7 350 aa14.57□□□□□ -0.08
TCF4-226ENST00000565018 TNIKQ9UKE5 1360 aa14.57□□□□□ -0.08
TCF4-226ENST00000565018 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
TCF4-226ENST00000565018 TRIM26Q12899 539 aaPredicted RBP14.56□□□□□ -0.08
TCF4-226ENST00000565018 KIF21BO75037 1637 aa14.55□□□□□ -0.08
TCF4-226ENST00000565018 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
TCF4-226ENST00000565018 CEP164Q9UPV0 1460 aa14.51□□□□□ -0.09
TCF4-226ENST00000565018 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
TCF4-226ENST00000565018 CUX1P39880 1505 aa14.49□□□□□ -0.09
TCF4-226ENST00000565018 HRCP23327 699 aa14.48□□□□□ -0.09
TCF4-226ENST00000565018 CEP162Q5TB80 1403 aa14.48□□□□□ -0.09
TCF4-226ENST00000565018 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
TCF4-226ENST00000565018 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
TCF4-226ENST00000565018 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
TCF4-226ENST00000565018 KIF27Q86VH2 1401 aa14.36□□□□□ -0.11
TCF4-226ENST00000565018 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
TCF4-226ENST00000565018 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
TCF4-226ENST00000565018 LAMC3Q9Y6N6 1575 aa14.32□□□□□ -0.12
TCF4-226ENST00000565018 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
TCF4-226ENST00000565018 CLIP1P30622 1438 aa14.29□□□□□ -0.12
TCF4-226ENST00000565018 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
TCF4-226ENST00000565018 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.13
TCF4-226ENST00000565018 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
TCF4-226ENST00000565018 CUX2O14529 1486 aa14.22□□□□□ -0.13
TCF4-226ENST00000565018 TOPBP1Q92547 1522 aa14.21□□□□□ -0.13
TCF4-226ENST00000565018 NESP48681 1621 aa14.21□□□□□ -0.14
TCF4-226ENST00000565018 IGF1RP08069 1367 aa14.2□□□□□ -0.14
TCF4-226ENST00000565018 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
TCF4-226ENST00000565018 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
TCF4-226ENST00000565018 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
TCF4-226ENST00000565018 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
TCF4-226ENST00000565018 ARAP1Q96P48 1450 aa14.13□□□□□ -0.15
TCF4-226ENST00000565018 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
TCF4-226ENST00000565018 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
TCF4-226ENST00000565018 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
TCF4-226ENST00000565018 PPARGC1BQ86YN6 1023 aaKnown RBP14.11□□□□□ -0.15
TCF4-226ENST00000565018 CUL7Q14999 1698 aa14.09□□□□□ -0.15
TCF4-226ENST00000565018 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.15
TCF4-226ENST00000565018 ARHGAP35Q9NRY4 1499 aa14.07□□□□□ -0.16
TCF4-226ENST00000565018 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
TCF4-226ENST00000565018 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
TCF4-226ENST00000565018 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
TCF4-226ENST00000565018 APLP2Q06481 763 aa14.02□□□□□ -0.17
TCF4-226ENST00000565018 MAP3K1Q13233 1512 aa14□□□□□ -0.17
TCF4-226ENST00000565018 TARBP1Q13395 1621 aaKnown RBP14□□□□□ -0.17
TCF4-226ENST00000565018 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
TCF4-226ENST00000565018 EFCAB5A4FU69 1503 aa13.97□□□□□ -0.17
TCF4-226ENST00000565018 GAPVD1Q14C86 1478 aa13.97□□□□□ -0.17
TCF4-226ENST00000565018 CTTNBP2Q8WZ74 1663 aa13.96□□□□□ -0.18
TCF4-226ENST00000565018 FHAD1B1AJZ9 1412 aa13.93□□□□□ -0.18
TCF4-226ENST00000565018 RANGAP1P46060 587 aaPredicted RBP13.93□□□□□ -0.18
TCF4-226ENST00000565018 WDR62O43379 1518 aa13.92□□□□□ -0.18
TCF4-226ENST00000565018 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
TCF4-226ENST00000565018 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms