RNA–Protein interactions for RNA: ENST00000564988.5

TM6SF1-206, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 4

Gene TM6SF1, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-206ENST00000564988 NISCHQ9Y2I1 1504 aa58.13■■■■■ 6.9
TM6SF1-206ENST00000564988 CCDC180Q9P1Z9 1646 aa51.42■■■■■ 5.82
TM6SF1-206ENST00000564988 ABCC9O60706 1549 aa49.67■■■■■ 5.54
TM6SF1-206ENST00000564988 ZCCHC6Q5VYS8 1495 aaKnown RBP48.58■■■■■ 5.37
TM6SF1-206ENST00000564988 DCAF8L2P0C7V8 631 aa48.29■■■■■ 5.32
TM6SF1-206ENST00000564988 NACADO15069 1562 aa48.2■■■■■ 5.31
TM6SF1-206ENST00000564988 DCAF1Q9Y4B6 1507 aa48.16■■■■■ 5.3
TM6SF1-206ENST00000564988 MYO15BQ96JP2 1530 aa48.13■■■■■ 5.3
TM6SF1-206ENST00000564988 RB1CC1Q8TDY2 1594 aa48.1■■■■■ 5.29
TM6SF1-206ENST00000564988 SCRIBQ14160 1630 aa46.95■■■■■ 5.11
TM6SF1-206ENST00000564988 UNC13AQ9UPW8 1703 aa46.93■■■■■ 5.1
TM6SF1-206ENST00000564988 BICRAQ9NZM4 1560 aa46.57■■■■■ 5.05
TM6SF1-206ENST00000564988 PABPN1Q86U42 306 aaKnown RBP eCLIP46.5■■■■■ 5.03
TM6SF1-206ENST00000564988 SHROOM4Q9ULL8 1493 aa46.28■■■■■ 5
TM6SF1-206ENST00000564988 EIF4G1Q04637 1599 aaKnown RBP45.32■■■■■ 4.85
TM6SF1-206ENST00000564988 CECR2Q9BXF3 1484 aa45.18■■■■■ 4.82
TM6SF1-206ENST00000564988 BAZ1AQ9NRL2 1556 aaPredicted RBP45.04■■■■■ 4.8
TM6SF1-206ENST00000564988 SMARCA4P51532 1647 aa44.97■■■■■ 4.79
TM6SF1-206ENST00000564988 CC2D2AQ9P2K1 1620 aa44.96■■■■■ 4.79
TM6SF1-206ENST00000564988 DNAJC5BQ9UF47 199 aa44.94■■■■■ 4.78
TM6SF1-206ENST00000564988 MROH2BQ7Z745 1585 aa44.8■■■■■ 4.76
TM6SF1-206ENST00000564988 SMARCA2P51531 1590 aa44.58■■■■■ 4.73
TM6SF1-206ENST00000564988 ATAD2BQ9ULI0 1458 aa44.57■■■■■ 4.73
TM6SF1-206ENST00000564988 PEG3Q9GZU2 1588 aa44.53■■■■■ 4.72
TM6SF1-206ENST00000564988 RSF1Q96T23 1441 aaPredicted RBP44.52■■■■■ 4.72
TM6SF1-206ENST00000564988 NCAPD3P42695 1498 aa44.45■■■■■ 4.71
TM6SF1-206ENST00000564988 WIZO95785 1651 aa44.33■■■■■ 4.69
TM6SF1-206ENST00000564988 HMGXB3Q12766 1538 aa44.32■■■■■ 4.69
TM6SF1-206ENST00000564988 BAZ1BQ9UIG0 1483 aaKnown RBP44.26■■■■■ 4.68
TM6SF1-206ENST00000564988 TOP2AP11388 1531 aaKnown RBP43.95■■■■■ 4.63
TM6SF1-206ENST00000564988 SUPT5HO00267 1087 aaKnown RBP43.87■■■■■ 4.61
TM6SF1-206ENST00000564988 CCDC88BA6NC98 1476 aa43.4■■■■■ 4.54
TM6SF1-206ENST00000564988 LAMC3Q9Y6N6 1575 aa43.2■■■■■ 4.51
TM6SF1-206ENST00000564988 CADPSQ9ULU8 1353 aa43.19■■■■■ 4.5
TM6SF1-206ENST00000564988 NESP48681 1621 aa43.15■■■■■ 4.5
TM6SF1-206ENST00000564988 CFTRP13569 1480 aa43.07■■■■■ 4.49
TM6SF1-206ENST00000564988 PDS5BQ9NTI5 1447 aa42.89■■■■■ 4.46
TM6SF1-206ENST00000564988 ERCC6Q03468 1493 aa42.81■■■■■ 4.44
TM6SF1-206ENST00000564988 PRDM2Q13029 1718 aa42.79■■■■■ 4.44
TM6SF1-206ENST00000564988 FANCD2Q9BXW9 1451 aa42.7■■■■■ 4.43
TM6SF1-206ENST00000564988 KIF21AQ7Z4S6 1674 aa42.66■■■■■ 4.42
TM6SF1-206ENST00000564988 CEP164Q9UPV0 1460 aa42.62■■■■■ 4.41
TM6SF1-206ENST00000564988 MRC2Q9UBG0 1479 aa42.41■■■■■ 4.38
TM6SF1-206ENST00000564988 THOC2Q8NI27 1593 aaKnown RBP42.39■■■■■ 4.38
TM6SF1-206ENST00000564988 WDR62O43379 1518 aa42.24■■■■■ 4.35
TM6SF1-206ENST00000564988 URB2Q14146 1524 aaKnown RBP42.21■■■■■ 4.35
TM6SF1-206ENST00000564988 ABCC8Q09428 1581 aa42.15■■■■■ 4.34
TM6SF1-206ENST00000564988 CUX2O14529 1486 aa42.12■■■■■ 4.33
TM6SF1-206ENST00000564988 DNMBPQ6XZF7 1577 aa42.11■■■■■ 4.33
TM6SF1-206ENST00000564988 TOPBP1Q92547 1522 aa42.09■■■■■ 4.33
TM6SF1-206ENST00000564988 CUX1P39880 1505 aa42■■■■■ 4.31
TM6SF1-206ENST00000564988 WRNQ14191 1432 aaPredicted RBP eCLIP41.99■■■■■ 4.31
TM6SF1-206ENST00000564988 SYNJ1O43426 1573 aa41.82■■■■■ 4.29
TM6SF1-206ENST00000564988 TOP2BQ02880 1626 aa41.82■■■■■ 4.29
TM6SF1-206ENST00000564988 BIVM-ERCC5R4GMW8 1640 aa41.81■■■■■ 4.28
TM6SF1-206ENST00000564988 POLA1P09884 1462 aaPredicted RBP41.78■■■■■ 4.28
TM6SF1-206ENST00000564988 FGD5Q6ZNL6 1462 aa41.77■■■■■ 4.28
TM6SF1-206ENST00000564988 IFT140Q96RY7 1462 aa41.69■■■■■ 4.26
TM6SF1-206ENST00000564988 SOGA1O94964 1423 aa41.61■■■■■ 4.25
TM6SF1-206ENST00000564988 TARBP1Q13395 1621 aaKnown RBP41.56■■■■■ 4.24
TM6SF1-206ENST00000564988 RAD54L2Q9Y4B4 1467 aa41.56■■■■■ 4.24
TM6SF1-206ENST00000564988 TRIM41Q8WV44 630 aa41.43■■■■■ 4.22
TM6SF1-206ENST00000564988 ABCA10Q8WWZ4 1543 aa41.41■■■■■ 4.22
TM6SF1-206ENST00000564988 ZNF608Q9ULD9 1512 aaPredicted RBP41.39■■■■■ 4.22
TM6SF1-206ENST00000564988 WDR97A6NE52 1622 aa41.38■■■■■ 4.21
TM6SF1-206ENST00000564988 CHIC1Q5VXU3 224 aa41.31■■■■■ 4.2
TM6SF1-206ENST00000564988 EIF4G3O43432 1585 aaKnown RBP41.29■■■■■ 4.2
TM6SF1-206ENST00000564988 TDRD9Q8NDG6 1382 aaKnown RBP41.27■■■■■ 4.2
TM6SF1-206ENST00000564988 AQRO60306 1485 aaKnown RBP eCLIP41.25■■■■■ 4.19
TM6SF1-206ENST00000564988 ABCA5Q8WWZ7 1642 aa41.18■■■■■ 4.18
TM6SF1-206ENST00000564988 GAPVD1Q14C86 1478 aa41.15■■■■■ 4.18
TM6SF1-206ENST00000564988 KIF27Q86VH2 1401 aa41.08■■■■■ 4.17
TM6SF1-206ENST00000564988 GRIN2BQ13224 1484 aa41.08■■■■■ 4.17
TM6SF1-206ENST00000564988 PBRM1Q86U86 1689 aa41.01■■■■■ 4.15
TM6SF1-206ENST00000564988 ERICH3Q5RHP9 1530 aa40.93■■■■■ 4.14
TM6SF1-206ENST00000564988 SNAPC4Q5SXM2 1469 aa40.91■■■■■ 4.14
TM6SF1-206ENST00000564988 MAGI1Q96QZ7 1491 aaPredicted RBP40.9■■■■■ 4.14
TM6SF1-206ENST00000564988 RUSC2Q8N2Y8 1516 aa40.83■■■■■ 4.13
TM6SF1-206ENST00000564988 IGF1RP08069 1367 aa40.78■■■■■ 4.12
TM6SF1-206ENST00000564988 EEA1Q15075 1411 aa40.75■■■■■ 4.11
TM6SF1-206ENST00000564988 ADAMTS12P58397 1594 aa40.74■■■■■ 4.11
TM6SF1-206ENST00000564988 SYNJ2O15056 1496 aa40.72■■■■■ 4.11
TM6SF1-206ENST00000564988 FHAD1B1AJZ9 1412 aa40.71■■■■■ 4.11
TM6SF1-206ENST00000564988 CUL7Q14999 1698 aa40.69■■■■■ 4.1
TM6SF1-206ENST00000564988 FBLN2P98095 1184 aa40.65■■■■■ 4.1
TM6SF1-206ENST00000564988 CHMP7Q8WUX9 453 aaPredicted RBP40.65■■■■■ 4.1
TM6SF1-206ENST00000564988 CHD1O14646 1710 aa40.62■■■■■ 4.09
TM6SF1-206ENST00000564988 CARMIL1Q5VZK9 1371 aa40.59■■■■■ 4.09
TM6SF1-206ENST00000564988 CSRNP3Q8WYN3 585 aa40.54■■■■■ 4.08
TM6SF1-206ENST00000564988 GRIN2AQ12879 1464 aa40.53■■■■■ 4.08
TM6SF1-206ENST00000564988 FAM9AQ8IZU1 332 aaPredicted RBP40.53■■■■■ 4.08
TM6SF1-206ENST00000564988 OSCARQ8IYS5 282 aa40.47■■■■■ 4.07
TM6SF1-206ENST00000564988 RAPGEF2Q9Y4G8 1499 aa40.43■■■■■ 4.06
TM6SF1-206ENST00000564988 PRXQ9BXM0 1461 aa40.42■■■■■ 4.06
TM6SF1-206ENST00000564988 NUP160Q12769 1436 aa40.33■■■■■ 4.05
TM6SF1-206ENST00000564988 CEP170Q5SW79 1584 aa40.28■■■■■ 4.04
TM6SF1-206ENST00000564988 KIF21BO75037 1637 aa40.24■■■■■ 4.03
TM6SF1-206ENST00000564988 CLASP1Q7Z460 1538 aa40.21■■■■■ 4.03
TM6SF1-206ENST00000564988 KIAA0586Q9BVV6 1533 aa40.11■■■■■ 4.01
TM6SF1-206ENST00000564988 GOLGA3Q08378 1498 aa40.07■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms