RNA–Protein interactions for RNA: ENST00000564887.5

NUP93-210, Transcript of nucleoporin 93, humanhuman

TSL 2 BASIC

Gene NUP93, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-210ENST00000564887 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
NUP93-210ENST00000564887 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
NUP93-210ENST00000564887 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
NUP93-210ENST00000564887 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
NUP93-210ENST00000564887 ABCC9O60706 1549 aa16.79■□□□□ 0.28
NUP93-210ENST00000564887 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
NUP93-210ENST00000564887 DCAF1Q9Y4B6 1507 aa16.43■□□□□ 0.22
NUP93-210ENST00000564887 NACADO15069 1562 aa16.26■□□□□ 0.19
NUP93-210ENST00000564887 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
NUP93-210ENST00000564887 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
NUP93-210ENST00000564887 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
NUP93-210ENST00000564887 SUPT5HO00267 1087 aaKnown RBP15.93■□□□□ 0.14
NUP93-210ENST00000564887 PABPN1Q86U42 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
NUP93-210ENST00000564887 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
NUP93-210ENST00000564887 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
NUP93-210ENST00000564887 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.1
NUP93-210ENST00000564887 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.09
NUP93-210ENST00000564887 MROH2BQ7Z745 1585 aa15.56■□□□□ 0.08
NUP93-210ENST00000564887 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
NUP93-210ENST00000564887 WIZO95785 1651 aa15.44■□□□□ 0.06
NUP93-210ENST00000564887 SMARCA4P51532 1647 aa15.43■□□□□ 0.06
NUP93-210ENST00000564887 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
NUP93-210ENST00000564887 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
NUP93-210ENST00000564887 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
NUP93-210ENST00000564887 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
NUP93-210ENST00000564887 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
NUP93-210ENST00000564887 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
NUP93-210ENST00000564887 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
NUP93-210ENST00000564887 CC2D2AQ9P2K1 1620 aa15.1■□□□□ 0.01
NUP93-210ENST00000564887 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
NUP93-210ENST00000564887 NCAPD3P42695 1498 aa15.05■□□□□ -0
NUP93-210ENST00000564887 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
NUP93-210ENST00000564887 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
NUP93-210ENST00000564887 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
NUP93-210ENST00000564887 ABCC8Q09428 1581 aa14.84□□□□□ -0.03
NUP93-210ENST00000564887 FAM9AQ8IZU1 332 aaPredicted RBP14.75□□□□□ -0.05
NUP93-210ENST00000564887 NESP48681 1621 aa14.73□□□□□ -0.05
NUP93-210ENST00000564887 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.05
NUP93-210ENST00000564887 CFTRP13569 1480 aa14.71□□□□□ -0.05
NUP93-210ENST00000564887 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
NUP93-210ENST00000564887 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
NUP93-210ENST00000564887 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
NUP93-210ENST00000564887 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
NUP93-210ENST00000564887 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
NUP93-210ENST00000564887 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
NUP93-210ENST00000564887 SOGA1O94964 1423 aa14.54□□□□□ -0.08
NUP93-210ENST00000564887 CUX1P39880 1505 aa14.53□□□□□ -0.08
NUP93-210ENST00000564887 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
NUP93-210ENST00000564887 RUSC2Q8N2Y8 1516 aa14.52□□□□□ -0.09
NUP93-210ENST00000564887 TOP2BQ02880 1626 aa14.49□□□□□ -0.09
NUP93-210ENST00000564887 PDS5BQ9NTI5 1447 aa14.47□□□□□ -0.09
NUP93-210ENST00000564887 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.09
NUP93-210ENST00000564887 CEP164Q9UPV0 1460 aa14.46□□□□□ -0.09
NUP93-210ENST00000564887 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
NUP93-210ENST00000564887 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
NUP93-210ENST00000564887 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
NUP93-210ENST00000564887 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
NUP93-210ENST00000564887 TOPBP1Q92547 1522 aa14.39□□□□□ -0.11
NUP93-210ENST00000564887 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
NUP93-210ENST00000564887 ERCC6Q03468 1493 aa14.36□□□□□ -0.11
NUP93-210ENST00000564887 DNMBPQ6XZF7 1577 aa14.36□□□□□ -0.11
NUP93-210ENST00000564887 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
NUP93-210ENST00000564887 CUX2O14529 1486 aa14.31□□□□□ -0.12
NUP93-210ENST00000564887 UBTFP17480 764 aaKnown RBP14.29□□□□□ -0.12
NUP93-210ENST00000564887 EEA1Q15075 1411 aa14.29□□□□□ -0.12
NUP93-210ENST00000564887 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
NUP93-210ENST00000564887 KIF27Q86VH2 1401 aa14.27□□□□□ -0.12
NUP93-210ENST00000564887 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
NUP93-210ENST00000564887 RANGAP1P46060 587 aaPredicted RBP14.25□□□□□ -0.13
NUP93-210ENST00000564887 RAPGEF2Q9Y4G8 1499 aa14.22□□□□□ -0.13
NUP93-210ENST00000564887 IGF1RP08069 1367 aa14.2□□□□□ -0.14
NUP93-210ENST00000564887 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
NUP93-210ENST00000564887 WDR62O43379 1518 aa14.18□□□□□ -0.14
NUP93-210ENST00000564887 THOC2Q8NI27 1593 aaKnown RBP14.18□□□□□ -0.14
NUP93-210ENST00000564887 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
NUP93-210ENST00000564887 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.146e-8■■■■■ 37.7
NUP93-210ENST00000564887 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
NUP93-210ENST00000564887 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
NUP93-210ENST00000564887 KIF21BO75037 1637 aa14.14□□□□□ -0.15
NUP93-210ENST00000564887 ZNF608Q9ULD9 1512 aaPredicted RBP14.14□□□□□ -0.15
NUP93-210ENST00000564887 CARMIL1Q5VZK9 1371 aa14.13□□□□□ -0.15
NUP93-210ENST00000564887 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
NUP93-210ENST00000564887 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
NUP93-210ENST00000564887 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
NUP93-210ENST00000564887 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
NUP93-210ENST00000564887 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
NUP93-210ENST00000564887 IFT140Q96RY7 1462 aa14.08□□□□□ -0.16
NUP93-210ENST00000564887 PPARGC1BQ86YN6 1023 aaKnown RBP14.06□□□□□ -0.16
NUP93-210ENST00000564887 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
NUP93-210ENST00000564887 CLIP1P30622 1438 aa14.01□□□□□ -0.17
NUP93-210ENST00000564887 PBRM1Q86U86 1689 aa14□□□□□ -0.17
NUP93-210ENST00000564887 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
NUP93-210ENST00000564887 FBLN2P98095 1184 aa14□□□□□ -0.17
NUP93-210ENST00000564887 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
NUP93-210ENST00000564887 TTBK1Q5TCY1 1321 aaPredicted RBP13.98□□□□□ -0.17
NUP93-210ENST00000564887 CUL7Q14999 1698 aa13.97□□□□□ -0.17
NUP93-210ENST00000564887 P3H3Q8IVL6 736 aa13.97□□□□□ -0.17
NUP93-210ENST00000564887 SNAPC4Q5SXM2 1469 aa13.96□□□□□ -0.18
NUP93-210ENST00000564887 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
NUP93-210ENST00000564887 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms