RNA–Protein interactions for RNA: ENST00000564804.1

TGFB1I1-209, transforming growth factor beta 1 induced transcript 1, humanhuman

TSL 5

Gene TGFB1I1, Length 1,616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1-209ENST00000564804 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
TGFB1I1-209ENST00000564804 CCDC180Q9P1Z9 1646 aa36.22■■■■□ 3.39
TGFB1I1-209ENST00000564804 ABCC9O60706 1549 aa34.85■■■■□ 3.17
TGFB1I1-209ENST00000564804 ZCCHC6Q5VYS8 1495 aaKnown RBP34.38■■■■□ 3.09
TGFB1I1-209ENST00000564804 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
TGFB1I1-209ENST00000564804 DCAF1Q9Y4B6 1507 aa33.99■■■■□ 3.03
TGFB1I1-209ENST00000564804 NACADO15069 1562 aa33.89■■■■□ 3.02
TGFB1I1-209ENST00000564804 MYO15BQ96JP2 1530 aa33.87■■■■□ 3.01
TGFB1I1-209ENST00000564804 RB1CC1Q8TDY2 1594 aa33.77■■■■□ 3
TGFB1I1-209ENST00000564804 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
TGFB1I1-209ENST00000564804 UNC13AQ9UPW8 1703 aa33.04■■■□□ 2.88
TGFB1I1-209ENST00000564804 SHROOM4Q9ULL8 1493 aa32.96■■■□□ 2.87
TGFB1I1-209ENST00000564804 BICRAQ9NZM4 1560 aa32.73■■■□□ 2.83
TGFB1I1-209ENST00000564804 PABPN1Q86U42 306 aaKnown RBP eCLIP32.68■■■□□ 2.82
TGFB1I1-209ENST00000564804 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
TGFB1I1-209ENST00000564804 EIF4G1Q04637 1599 aaKnown RBP31.83■■■□□ 2.69
TGFB1I1-209ENST00000564804 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
TGFB1I1-209ENST00000564804 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
TGFB1I1-209ENST00000564804 MROH2BQ7Z745 1585 aa31.7■■■□□ 2.67
TGFB1I1-209ENST00000564804 RSF1Q96T23 1441 aaPredicted RBP31.57■■■□□ 2.64
TGFB1I1-209ENST00000564804 CC2D2AQ9P2K1 1620 aa31.53■■■□□ 2.64
TGFB1I1-209ENST00000564804 WIZO95785 1651 aa31.4■■■□□ 2.62
TGFB1I1-209ENST00000564804 PEG3Q9GZU2 1588 aa31.4■■■□□ 2.62
TGFB1I1-209ENST00000564804 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
TGFB1I1-209ENST00000564804 SMARCA2P51531 1590 aa31.39■■■□□ 2.62
TGFB1I1-209ENST00000564804 SUPT5HO00267 1087 aaKnown RBP31.34■■■□□ 2.61
TGFB1I1-209ENST00000564804 DNAJC5BQ9UF47 199 aa31.33■■■□□ 2.61
TGFB1I1-209ENST00000564804 NCAPD3P42695 1498 aa31.25■■■□□ 2.59
TGFB1I1-209ENST00000564804 BAZ1BQ9UIG0 1483 aaKnown RBP31.2■■■□□ 2.58
TGFB1I1-209ENST00000564804 HMGXB3Q12766 1538 aa31.18■■■□□ 2.58
TGFB1I1-209ENST00000564804 TOP2AP11388 1531 aaKnown RBP31.09■■■□□ 2.57
TGFB1I1-209ENST00000564804 CCDC88BA6NC98 1476 aa30.72■■■□□ 2.51
TGFB1I1-209ENST00000564804 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
TGFB1I1-209ENST00000564804 CFTRP13569 1480 aa30.36■■■□□ 2.45
TGFB1I1-209ENST00000564804 NESP48681 1621 aa30.36■■■□□ 2.45
TGFB1I1-209ENST00000564804 LAMC3Q9Y6N6 1575 aa30.34■■■□□ 2.45
TGFB1I1-209ENST00000564804 PRDM2Q13029 1718 aa30.2■■■□□ 2.42
TGFB1I1-209ENST00000564804 PDS5BQ9NTI5 1447 aa30.11■■■□□ 2.41
TGFB1I1-209ENST00000564804 FANCD2Q9BXW9 1451 aa30.07■■■□□ 2.4
TGFB1I1-209ENST00000564804 KIF21AQ7Z4S6 1674 aa30.02■■■□□ 2.4
TGFB1I1-209ENST00000564804 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
TGFB1I1-209ENST00000564804 CEP164Q9UPV0 1460 aa29.97■■■□□ 2.39
TGFB1I1-209ENST00000564804 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
TGFB1I1-209ENST00000564804 MRC2Q9UBG0 1479 aa29.78■■■□□ 2.36
TGFB1I1-209ENST00000564804 WRNQ14191 1432 aaPredicted RBP eCLIP29.77■■■□□ 2.36
TGFB1I1-209ENST00000564804 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
TGFB1I1-209ENST00000564804 URB2Q14146 1524 aaKnown RBP29.73■■■□□ 2.35
TGFB1I1-209ENST00000564804 CUX1P39880 1505 aa29.7■■■□□ 2.34
TGFB1I1-209ENST00000564804 DNMBPQ6XZF7 1577 aa29.69■■■□□ 2.34
TGFB1I1-209ENST00000564804 SYNJ1O43426 1573 aa29.67■■■□□ 2.34
TGFB1I1-209ENST00000564804 TOPBP1Q92547 1522 aa29.66■■■□□ 2.34
TGFB1I1-209ENST00000564804 WDR62O43379 1518 aa29.65■■■□□ 2.34
TGFB1I1-209ENST00000564804 TOP2BQ02880 1626 aa29.62■■■□□ 2.33
TGFB1I1-209ENST00000564804 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
TGFB1I1-209ENST00000564804 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
TGFB1I1-209ENST00000564804 TRIM41Q8WV44 630 aa29.53■■■□□ 2.32
TGFB1I1-209ENST00000564804 FGD5Q6ZNL6 1462 aa29.5■■■□□ 2.31
TGFB1I1-209ENST00000564804 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
TGFB1I1-209ENST00000564804 CUX2O14529 1486 aa29.37■■■□□ 2.29
TGFB1I1-209ENST00000564804 RAD54L2Q9Y4B4 1467 aa29.34■■■□□ 2.29
TGFB1I1-209ENST00000564804 SOGA1O94964 1423 aa29.34■■■□□ 2.29
TGFB1I1-209ENST00000564804 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
TGFB1I1-209ENST00000564804 TARBP1Q13395 1621 aaKnown RBP29.28■■■□□ 2.28
TGFB1I1-209ENST00000564804 ABCA10Q8WWZ4 1543 aa29.22■■■□□ 2.27
TGFB1I1-209ENST00000564804 WDR97A6NE52 1622 aa29.21■■■□□ 2.27
TGFB1I1-209ENST00000564804 ZNF608Q9ULD9 1512 aaPredicted RBP29.14■■■□□ 2.26
TGFB1I1-209ENST00000564804 TDRD9Q8NDG6 1382 aaKnown RBP29.12■■■□□ 2.25
TGFB1I1-209ENST00000564804 KIF27Q86VH2 1401 aa29.08■■■□□ 2.25
TGFB1I1-209ENST00000564804 EIF4G3O43432 1585 aaKnown RBP29.06■■■□□ 2.24
TGFB1I1-209ENST00000564804 ABCA5Q8WWZ7 1642 aa29.06■■■□□ 2.24
TGFB1I1-209ENST00000564804 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.24
TGFB1I1-209ENST00000564804 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
TGFB1I1-209ENST00000564804 GAPVD1Q14C86 1478 aa29.02■■■□□ 2.24
TGFB1I1-209ENST00000564804 FAM9AQ8IZU1 332 aaPredicted RBP28.95■■■□□ 2.23
TGFB1I1-209ENST00000564804 EEA1Q15075 1411 aa28.95■■■□□ 2.23
TGFB1I1-209ENST00000564804 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
TGFB1I1-209ENST00000564804 GRIN2BQ13224 1484 aa28.92■■■□□ 2.22
TGFB1I1-209ENST00000564804 ERICH3Q5RHP9 1530 aa28.88■■■□□ 2.21
TGFB1I1-209ENST00000564804 IGF1RP08069 1367 aa28.85■■■□□ 2.21
TGFB1I1-209ENST00000564804 CSRNP3Q8WYN3 585 aa28.82■■■□□ 2.2
TGFB1I1-209ENST00000564804 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
TGFB1I1-209ENST00000564804 MAGI1Q96QZ7 1491 aaPredicted RBP28.77■■■□□ 2.2
TGFB1I1-209ENST00000564804 CUL7Q14999 1698 aa28.76■■■□□ 2.2
TGFB1I1-209ENST00000564804 ADAMTS12P58397 1594 aa28.74■■■□□ 2.19
TGFB1I1-209ENST00000564804 CARMIL1Q5VZK9 1371 aa28.72■■■□□ 2.19
TGFB1I1-209ENST00000564804 FHAD1B1AJZ9 1412 aa28.7■■■□□ 2.18
TGFB1I1-209ENST00000564804 PRXQ9BXM0 1461 aa28.68■■■□□ 2.18
TGFB1I1-209ENST00000564804 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
TGFB1I1-209ENST00000564804 RAPGEF2Q9Y4G8 1499 aa28.62■■■□□ 2.17
TGFB1I1-209ENST00000564804 KIF21BO75037 1637 aa28.62■■■□□ 2.17
TGFB1I1-209ENST00000564804 FBLN2P98095 1184 aa28.6■■■□□ 2.17
TGFB1I1-209ENST00000564804 CHMP7Q8WUX9 453 aaPredicted RBP28.6■■■□□ 2.17
TGFB1I1-209ENST00000564804 EHMT2Q96KQ7 1210 aa28.57■■■□□ 2.16
TGFB1I1-209ENST00000564804 CHD1O14646 1710 aa28.56■■■□□ 2.16
TGFB1I1-209ENST00000564804 GRIN2AQ12879 1464 aa28.55■■■□□ 2.16
TGFB1I1-209ENST00000564804 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
TGFB1I1-209ENST00000564804 LOC105371045A0A1W2PR82 267 aa28.41■■■□□ 2.14
TGFB1I1-209ENST00000564804 CEP170Q5SW79 1584 aa28.4■■■□□ 2.14
TGFB1I1-209ENST00000564804 UBTFP17480 764 aaKnown RBP28.4■■■□□ 2.14
TGFB1I1-209ENST00000564804 NUP160Q12769 1436 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms