RNA–Protein interactions for RNA: ENST00000564803.5

IRF8-206, Transcript of interferon regulatory factor 8, humanhuman

TSL 2

Gene IRF8, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-206ENST00000564803 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
IRF8-206ENST00000564803 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
IRF8-206ENST00000564803 ABCC9O60706 1549 aa36.75■■■■□ 3.47
IRF8-206ENST00000564803 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
IRF8-206ENST00000564803 NACADO15069 1562 aa35.67■■■■□ 3.3
IRF8-206ENST00000564803 RB1CC1Q8TDY2 1594 aa35.65■■■■□ 3.3
IRF8-206ENST00000564803 DCAF8L2P0C7V8 631 aa35.65■■■■□ 3.3
IRF8-206ENST00000564803 DCAF1Q9Y4B6 1507 aa35.59■■■■□ 3.29
IRF8-206ENST00000564803 MYO15BQ96JP2 1530 aa35.52■■■■□ 3.28
IRF8-206ENST00000564803 UNC13AQ9UPW8 1703 aa35.19■■■■□ 3.22
IRF8-206ENST00000564803 SCRIBQ14160 1630 aa34.95■■■■□ 3.18
IRF8-206ENST00000564803 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
IRF8-206ENST00000564803 SHROOM4Q9ULL8 1493 aa34.33■■■■□ 3.09
IRF8-206ENST00000564803 PABPN1Q86U42 306 aaKnown RBP eCLIP34.29■■■■□ 3.08
IRF8-206ENST00000564803 EIF4G1Q04637 1599 aaKnown RBP33.59■■■□□ 2.97
IRF8-206ENST00000564803 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
IRF8-206ENST00000564803 SMARCA4P51532 1647 aa33.42■■■□□ 2.94
IRF8-206ENST00000564803 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
IRF8-206ENST00000564803 CC2D2AQ9P2K1 1620 aa33.37■■■□□ 2.93
IRF8-206ENST00000564803 MROH2BQ7Z745 1585 aa33.2■■■□□ 2.91
IRF8-206ENST00000564803 DNAJC5BQ9UF47 199 aa33.04■■■□□ 2.88
IRF8-206ENST00000564803 WIZO95785 1651 aa33.04■■■□□ 2.88
IRF8-206ENST00000564803 SMARCA2P51531 1590 aa33■■■□□ 2.87
IRF8-206ENST00000564803 PEG3Q9GZU2 1588 aa32.99■■■□□ 2.87
IRF8-206ENST00000564803 ATAD2BQ9ULI0 1458 aa32.92■■■□□ 2.86
IRF8-206ENST00000564803 RSF1Q96T23 1441 aaPredicted RBP32.89■■■□□ 2.86
IRF8-206ENST00000564803 HMGXB3Q12766 1538 aa32.82■■■□□ 2.85
IRF8-206ENST00000564803 BAZ1BQ9UIG0 1483 aaKnown RBP32.77■■■□□ 2.84
IRF8-206ENST00000564803 NCAPD3P42695 1498 aa32.75■■■□□ 2.83
IRF8-206ENST00000564803 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
IRF8-206ENST00000564803 SUPT5HO00267 1087 aaKnown RBP32.47■■■□□ 2.79
IRF8-206ENST00000564803 PRDM2Q13029 1718 aa32.12■■■□□ 2.73
IRF8-206ENST00000564803 CCDC88BA6NC98 1476 aa32.1■■■□□ 2.73
IRF8-206ENST00000564803 LAMC3Q9Y6N6 1575 aa32.02■■■□□ 2.72
IRF8-206ENST00000564803 NESP48681 1621 aa31.97■■■□□ 2.71
IRF8-206ENST00000564803 KIF21AQ7Z4S6 1674 aa31.88■■■□□ 2.69
IRF8-206ENST00000564803 CADPSQ9ULU8 1353 aa31.81■■■□□ 2.68
IRF8-206ENST00000564803 CFTRP13569 1480 aa31.79■■■□□ 2.68
IRF8-206ENST00000564803 ERCC6Q03468 1493 aa31.66■■■□□ 2.66
IRF8-206ENST00000564803 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
IRF8-206ENST00000564803 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
IRF8-206ENST00000564803 CEP164Q9UPV0 1460 aa31.54■■■□□ 2.64
IRF8-206ENST00000564803 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.63
IRF8-206ENST00000564803 MRC2Q9UBG0 1479 aa31.36■■■□□ 2.61
IRF8-206ENST00000564803 WDR62O43379 1518 aa31.28■■■□□ 2.6
IRF8-206ENST00000564803 ABCC8Q09428 1581 aa31.26■■■□□ 2.6
IRF8-206ENST00000564803 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
IRF8-206ENST00000564803 DNMBPQ6XZF7 1577 aa31.24■■■□□ 2.59
IRF8-206ENST00000564803 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
IRF8-206ENST00000564803 BIVM-ERCC5R4GMW8 1640 aa31.15■■■□□ 2.58
IRF8-206ENST00000564803 CUX1P39880 1505 aa31.14■■■□□ 2.58
IRF8-206ENST00000564803 SYNJ1O43426 1573 aa31.11■■■□□ 2.57
IRF8-206ENST00000564803 CUX2O14529 1486 aa31.08■■■□□ 2.57
IRF8-206ENST00000564803 TOP2BQ02880 1626 aa31.06■■■□□ 2.56
IRF8-206ENST00000564803 WRNQ14191 1432 aaPredicted RBP eCLIP31.06■■■□□ 2.56
IRF8-206ENST00000564803 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.55
IRF8-206ENST00000564803 POLA1P09884 1462 aaPredicted RBP30.9■■■□□ 2.54
IRF8-206ENST00000564803 WDR97A6NE52 1622 aa30.9■■■□□ 2.54
IRF8-206ENST00000564803 TARBP1Q13395 1621 aaKnown RBP30.86■■■□□ 2.53
IRF8-206ENST00000564803 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
IRF8-206ENST00000564803 RAD54L2Q9Y4B4 1467 aa30.76■■■□□ 2.51
IRF8-206ENST00000564803 EIF4G3O43432 1585 aaKnown RBP30.72■■■□□ 2.51
IRF8-206ENST00000564803 SOGA1O94964 1423 aa30.71■■■□□ 2.51
IRF8-206ENST00000564803 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
IRF8-206ENST00000564803 ZNF608Q9ULD9 1512 aaPredicted RBP30.63■■■□□ 2.49
IRF8-206ENST00000564803 ABCA10Q8WWZ4 1543 aa30.62■■■□□ 2.49
IRF8-206ENST00000564803 ABCA5Q8WWZ7 1642 aa30.61■■■□□ 2.49
IRF8-206ENST00000564803 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
IRF8-206ENST00000564803 CHIC1Q5VXU3 224 aa30.52■■■□□ 2.48
IRF8-206ENST00000564803 AQRO60306 1485 aaKnown RBP eCLIP30.47■■■□□ 2.47
IRF8-206ENST00000564803 TDRD9Q8NDG6 1382 aaKnown RBP30.47■■■□□ 2.47
IRF8-206ENST00000564803 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
IRF8-206ENST00000564803 CHD1O14646 1710 aa30.39■■■□□ 2.45
IRF8-206ENST00000564803 KIF27Q86VH2 1401 aa30.35■■■□□ 2.45
IRF8-206ENST00000564803 GRIN2BQ13224 1484 aa30.34■■■□□ 2.45
IRF8-206ENST00000564803 ERICH3Q5RHP9 1530 aa30.31■■■□□ 2.44
IRF8-206ENST00000564803 SNAPC4Q5SXM2 1469 aa30.3■■■□□ 2.44
IRF8-206ENST00000564803 CUL7Q14999 1698 aa30.3■■■□□ 2.44
IRF8-206ENST00000564803 ADAMTS12P58397 1594 aa30.28■■■□□ 2.44
IRF8-206ENST00000564803 RUSC2Q8N2Y8 1516 aa30.27■■■□□ 2.44
IRF8-206ENST00000564803 MAGI1Q96QZ7 1491 aaPredicted RBP30.24■■■□□ 2.43
IRF8-206ENST00000564803 DNAJC5Q9H3Z4 198 aa30.17■■■□□ 2.42
IRF8-206ENST00000564803 EEA1Q15075 1411 aa30.11■■■□□ 2.41
IRF8-206ENST00000564803 SYNJ2O15056 1496 aa30.1■■■□□ 2.41
IRF8-206ENST00000564803 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
IRF8-206ENST00000564803 IGF1RP08069 1367 aa30.03■■■□□ 2.4
IRF8-206ENST00000564803 FAM9AQ8IZU1 332 aaPredicted RBP30.02■■■□□ 2.4
IRF8-206ENST00000564803 GRIN2AQ12879 1464 aa29.99■■■□□ 2.39
IRF8-206ENST00000564803 FBLN2P98095 1184 aa29.99■■■□□ 2.39
IRF8-206ENST00000564803 CTTNBP2Q8WZ74 1663 aa29.98■■■□□ 2.39
IRF8-206ENST00000564803 CARMIL1Q5VZK9 1371 aa29.94■■■□□ 2.38
IRF8-206ENST00000564803 KIF21BO75037 1637 aa29.94■■■□□ 2.38
IRF8-206ENST00000564803 CHMP7Q8WUX9 453 aaPredicted RBP29.94■■■□□ 2.38
IRF8-206ENST00000564803 CEP170Q5SW79 1584 aa29.91■■■□□ 2.38
IRF8-206ENST00000564803 RAPGEF2Q9Y4G8 1499 aa29.9■■■□□ 2.38
IRF8-206ENST00000564803 CSRNP3Q8WYN3 585 aa29.88■■■□□ 2.37
IRF8-206ENST00000564803 PRXQ9BXM0 1461 aa29.87■■■□□ 2.37
IRF8-206ENST00000564803 CLASP1Q7Z460 1538 aa29.81■■■□□ 2.36
IRF8-206ENST00000564803 NUP160Q12769 1436 aa29.77■■■□□ 2.36
IRF8-206ENST00000564803 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms