RNA–Protein interactions for RNA: ENST00000564750.5

POLR3E-211, Transcript of RNA polymerase III subunit E, humanhuman

TSL 2

Gene POLR3E, Length 2,327 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-211ENST00000564750 NISCHQ9Y2I1 1504 aa37.53■■■■□ 3.6
POLR3E-211ENST00000564750 CCDC180Q9P1Z9 1646 aa32.23■■■□□ 2.75
POLR3E-211ENST00000564750 ZCCHC6Q5VYS8 1495 aaKnown RBP31.67■■■□□ 2.66
POLR3E-211ENST00000564750 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
POLR3E-211ENST00000564750 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
POLR3E-211ENST00000564750 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
POLR3E-211ENST00000564750 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
POLR3E-211ENST00000564750 ABCC9O60706 1549 aa30.15■■■□□ 2.42
POLR3E-211ENST00000564750 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
POLR3E-211ENST00000564750 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
POLR3E-211ENST00000564750 NACADO15069 1562 aa29.85■■■□□ 2.37
POLR3E-211ENST00000564750 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
POLR3E-211ENST00000564750 RSF1Q96T23 1441 aaPredicted RBP29.47■■■□□ 2.31
POLR3E-211ENST00000564750 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
POLR3E-211ENST00000564750 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
POLR3E-211ENST00000564750 MROH2BQ7Z745 1585 aa29.15■■■□□ 2.26
POLR3E-211ENST00000564750 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
POLR3E-211ENST00000564750 WIZO95785 1651 aa28.99■■■□□ 2.23
POLR3E-211ENST00000564750 BAZ1AQ9NRL2 1556 aaPredicted RBP28.87■■■□□ 2.21
POLR3E-211ENST00000564750 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
POLR3E-211ENST00000564750 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.19
POLR3E-211ENST00000564750 LOC105371045A0A1W2PR82 267 aa28.66■■■□□ 2.18
POLR3E-211ENST00000564750 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
POLR3E-211ENST00000564750 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
POLR3E-211ENST00000564750 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
POLR3E-211ENST00000564750 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
POLR3E-211ENST00000564750 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
POLR3E-211ENST00000564750 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
POLR3E-211ENST00000564750 FAM9AQ8IZU1 332 aaPredicted RBP28.32■■■□□ 2.12
POLR3E-211ENST00000564750 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.11
POLR3E-211ENST00000564750 ABCC8Q09428 1581 aa28.14■■■□□ 2.09
POLR3E-211ENST00000564750 PCGF6Q9BYE7 350 aa28.12■■■□□ 2.09
POLR3E-211ENST00000564750 EHMT2Q96KQ7 1210 aa28.07■■■□□ 2.08
POLR3E-211ENST00000564750 ATAD2BQ9ULI0 1458 aa28.05■■■□□ 2.08
POLR3E-211ENST00000564750 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
POLR3E-211ENST00000564750 HRCP23327 699 aa27.8■■■□□ 2.04
POLR3E-211ENST00000564750 SOGA1O94964 1423 aa27.74■■■□□ 2.03
POLR3E-211ENST00000564750 TRIM26Q12899 539 aaPredicted RBP27.72■■■□□ 2.03
POLR3E-211ENST00000564750 WRNQ14191 1432 aaPredicted RBP eCLIP27.7■■■□□ 2.02
POLR3E-211ENST00000564750 RUSC2Q8N2Y8 1516 aa27.64■■■□□ 2.02
POLR3E-211ENST00000564750 SYNJ1O43426 1573 aa27.64■■■□□ 2.02
POLR3E-211ENST00000564750 HMGXB3Q12766 1538 aa27.6■■■□□ 2.01
POLR3E-211ENST00000564750 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
POLR3E-211ENST00000564750 EEA1Q15075 1411 aa27.52■■■□□ 2
POLR3E-211ENST00000564750 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
POLR3E-211ENST00000564750 PPARGC1BQ86YN6 1023 aaKnown RBP27.39■■□□□ 1.97
POLR3E-211ENST00000564750 CEP162Q5TB80 1403 aa27.38■■□□□ 1.97
POLR3E-211ENST00000564750 TNIKQ9UKE5 1360 aa27.36■■□□□ 1.97
POLR3E-211ENST00000564750 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
POLR3E-211ENST00000564750 GOLGA3Q08378 1498 aa27.32■■□□□ 1.96
POLR3E-211ENST00000564750 UBTFP17480 764 aaKnown RBP27.3■■□□□ 1.96
POLR3E-211ENST00000564750 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
POLR3E-211ENST00000564750 CFTRP13569 1480 aa27.24■■□□□ 1.95
POLR3E-211ENST00000564750 KIF21BO75037 1637 aa27.24■■□□□ 1.95
POLR3E-211ENST00000564750 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
POLR3E-211ENST00000564750 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.94
POLR3E-211ENST00000564750 CUX1P39880 1505 aa27.18■■□□□ 1.94
POLR3E-211ENST00000564750 PRDM2Q13029 1718 aa27.11■■□□□ 1.93
POLR3E-211ENST00000564750 RAPGEF2Q9Y4G8 1499 aa27.1■■□□□ 1.93
POLR3E-211ENST00000564750 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
POLR3E-211ENST00000564750 CADPSQ9ULU8 1353 aa27■■□□□ 1.91
POLR3E-211ENST00000564750 CLIP1P30622 1438 aa26.97■■□□□ 1.91
POLR3E-211ENST00000564750 PRXQ9BXM0 1461 aa26.91■■□□□ 1.9
POLR3E-211ENST00000564750 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
POLR3E-211ENST00000564750 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
POLR3E-211ENST00000564750 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
POLR3E-211ENST00000564750 RANGAP1P46060 587 aaPredicted RBP26.87■■□□□ 1.89
POLR3E-211ENST00000564750 VPS8Q8N3P4 1428 aa26.8■■□□□ 1.88
POLR3E-211ENST00000564750 FANCD2Q9BXW9 1451 aa26.76■■□□□ 1.87
POLR3E-211ENST00000564750 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
POLR3E-211ENST00000564750 CUX2O14529 1486 aa26.74■■□□□ 1.87
POLR3E-211ENST00000564750 NESP48681 1621 aa26.74■■□□□ 1.87
POLR3E-211ENST00000564750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.73■■□□□ 1.87
POLR3E-211ENST00000564750 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
POLR3E-211ENST00000564750 IGF1RP08069 1367 aa26.62■■□□□ 1.85
POLR3E-211ENST00000564750 CCER1Q8TC90 406 aaPredicted RBP26.6■■□□□ 1.85
POLR3E-211ENST00000564750 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
POLR3E-211ENST00000564750 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
POLR3E-211ENST00000564750 TOPBP1Q92547 1522 aa26.56■■□□□ 1.84
POLR3E-211ENST00000564750 APLP2Q06481 763 aa26.55■■□□□ 1.84
POLR3E-211ENST00000564750 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
POLR3E-211ENST00000564750 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
POLR3E-211ENST00000564750 POLA1P09884 1462 aaPredicted RBP26.51■■□□□ 1.83
POLR3E-211ENST00000564750 CARMIL1Q5VZK9 1371 aa26.49■■□□□ 1.83
POLR3E-211ENST00000564750 ARHGAP35Q9NRY4 1499 aa26.48■■□□□ 1.83
POLR3E-211ENST00000564750 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
POLR3E-211ENST00000564750 URB2Q14146 1524 aaKnown RBP26.43■■□□□ 1.82
POLR3E-211ENST00000564750 HNRNPUL2Q1KMD3 747 aaKnown RBP26.39■■□□□ 1.82
POLR3E-211ENST00000564750 KANK4Q5T7N3 995 aaPredicted RBP26.36■■□□□ 1.81
POLR3E-211ENST00000564750 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
POLR3E-211ENST00000564750 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
POLR3E-211ENST00000564750 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
POLR3E-211ENST00000564750 CUL7Q14999 1698 aa26.25■■□□□ 1.79
POLR3E-211ENST00000564750 ABCA5Q8WWZ7 1642 aa26.2■■□□□ 1.78
POLR3E-211ENST00000564750 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.78
POLR3E-211ENST00000564750 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
POLR3E-211ENST00000564750 P3H3Q8IVL6 736 aa26.15■■□□□ 1.78
POLR3E-211ENST00000564750 TIAM1Q13009 1591 aa26.13■■□□□ 1.77
POLR3E-211ENST00000564750 GAPVD1Q14C86 1478 aa26.12■■□□□ 1.77
POLR3E-211ENST00000564750 RRBP1Q9P2E9 1410 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms