RNA–Protein interactions for RNA: ENST00000564744.1

RPL4-208, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-208ENST00000564744 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.85
RPL4-208ENST00000564744 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
RPL4-208ENST00000564744 ABCC9O60706 1549 aa17.5■□□□□ 0.39
RPL4-208ENST00000564744 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
RPL4-208ENST00000564744 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
RPL4-208ENST00000564744 DCAF8L2P0C7V8 631 aa16.97■□□□□ 0.31
RPL4-208ENST00000564744 RB1CC1Q8TDY2 1594 aa16.86■□□□□ 0.29
RPL4-208ENST00000564744 NACADO15069 1562 aa16.85■□□□□ 0.29
RPL4-208ENST00000564744 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.28
RPL4-208ENST00000564744 MYO15BQ96JP2 1530 aa16.74■□□□□ 0.27
RPL4-208ENST00000564744 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
RPL4-208ENST00000564744 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
RPL4-208ENST00000564744 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
RPL4-208ENST00000564744 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
RPL4-208ENST00000564744 PABPN1Q86U42 306 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPL4-208ENST00000564744 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
RPL4-208ENST00000564744 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
RPL4-208ENST00000564744 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
RPL4-208ENST00000564744 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
RPL4-208ENST00000564744 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.13
RPL4-208ENST00000564744 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
RPL4-208ENST00000564744 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
RPL4-208ENST00000564744 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
RPL4-208ENST00000564744 WIZO95785 1651 aa15.61■□□□□ 0.09
RPL4-208ENST00000564744 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
RPL4-208ENST00000564744 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
RPL4-208ENST00000564744 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
RPL4-208ENST00000564744 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
RPL4-208ENST00000564744 NCAPD3P42695 1498 aa15.52■□□□□ 0.07
RPL4-208ENST00000564744 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
RPL4-208ENST00000564744 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
RPL4-208ENST00000564744 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
RPL4-208ENST00000564744 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
RPL4-208ENST00000564744 NESP48681 1621 aa15.21■□□□□ 0.02
RPL4-208ENST00000564744 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
RPL4-208ENST00000564744 LAMC3Q9Y6N6 1575 aa15.13■□□□□ 0.01
RPL4-208ENST00000564744 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
RPL4-208ENST00000564744 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
RPL4-208ENST00000564744 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
RPL4-208ENST00000564744 CADPSQ9ULU8 1353 aa15.09■□□□□ 0.01
RPL4-208ENST00000564744 CFTRP13569 1480 aa15.04■□□□□ -0
RPL4-208ENST00000564744 ERCC6Q03468 1493 aa15.04■□□□□ -0
RPL4-208ENST00000564744 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
RPL4-208ENST00000564744 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
RPL4-208ENST00000564744 CEP164Q9UPV0 1460 aa14.94□□□□□ -0.02
RPL4-208ENST00000564744 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
RPL4-208ENST00000564744 MRC2Q9UBG0 1479 aa14.87□□□□□ -0.03
RPL4-208ENST00000564744 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.04
RPL4-208ENST00000564744 WDR62O43379 1518 aa14.81□□□□□ -0.04
RPL4-208ENST00000564744 ABCC8Q09428 1581 aa14.78□□□□□ -0.04
RPL4-208ENST00000564744 PHF23Q9BUL5 403 aaPredicted RBP14.77□□□□□ -0.05
RPL4-208ENST00000564744 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
RPL4-208ENST00000564744 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
RPL4-208ENST00000564744 CUX2O14529 1486 aa14.75□□□□□ -0.05
RPL4-208ENST00000564744 CUX1P39880 1505 aa14.74□□□□□ -0.05
RPL4-208ENST00000564744 SYNJ1O43426 1573 aa14.7□□□□□ -0.06
RPL4-208ENST00000564744 WRNQ14191 1432 aaPredicted RBP eCLIP14.67□□□□□ -0.06
RPL4-208ENST00000564744 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
RPL4-208ENST00000564744 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
RPL4-208ENST00000564744 TOP2BQ02880 1626 aa14.64□□□□□ -0.07
RPL4-208ENST00000564744 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
RPL4-208ENST00000564744 RAD54L2Q9Y4B4 1467 aa14.61□□□□□ -0.07
RPL4-208ENST00000564744 TARBP1Q13395 1621 aaKnown RBP14.59□□□□□ -0.07
RPL4-208ENST00000564744 IFT140Q96RY7 1462 aa14.58□□□□□ -0.08
RPL4-208ENST00000564744 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
RPL4-208ENST00000564744 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
RPL4-208ENST00000564744 SOGA1O94964 1423 aa14.56□□□□□ -0.08
RPL4-208ENST00000564744 EIF4G3O43432 1585 aaKnown RBP14.54□□□□□ -0.08
RPL4-208ENST00000564744 AQRO60306 1485 aaKnown RBP eCLIP14.49□□□□□ -0.091e-16■■■■□ 26.3
RPL4-208ENST00000564744 TDRD9Q8NDG6 1382 aaKnown RBP14.48□□□□□ -0.09
RPL4-208ENST00000564744 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
RPL4-208ENST00000564744 PBRM1Q86U86 1689 aa14.47□□□□□ -0.09
RPL4-208ENST00000564744 ABCA5Q8WWZ7 1642 aa14.45□□□□□ -0.1
RPL4-208ENST00000564744 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
RPL4-208ENST00000564744 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
RPL4-208ENST00000564744 CHD1O14646 1710 aa14.38□□□□□ -0.11
RPL4-208ENST00000564744 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
RPL4-208ENST00000564744 GRIN2BQ13224 1484 aa14.37□□□□□ -0.11
RPL4-208ENST00000564744 RUSC2Q8N2Y8 1516 aa14.36□□□□□ -0.11
RPL4-208ENST00000564744 KIF27Q86VH2 1401 aa14.33□□□□□ -0.11
RPL4-208ENST00000564744 ADAMTS12P58397 1594 aa14.32□□□□□ -0.12
RPL4-208ENST00000564744 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
RPL4-208ENST00000564744 MAGI1Q96QZ7 1491 aaPredicted RBP14.3□□□□□ -0.12
RPL4-208ENST00000564744 FBLN2P98095 1184 aa14.29□□□□□ -0.12
RPL4-208ENST00000564744 POTEDQ86YR6 584 aa14.28□□□□□ -0.12
RPL4-208ENST00000564744 CUL7Q14999 1698 aa14.26□□□□□ -0.13
RPL4-208ENST00000564744 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
RPL4-208ENST00000564744 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
RPL4-208ENST00000564744 IGF1RP08069 1367 aa14.23□□□□□ -0.13
RPL4-208ENST00000564744 FHAD1B1AJZ9 1412 aa14.23□□□□□ -0.13
RPL4-208ENST00000564744 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
RPL4-208ENST00000564744 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
RPL4-208ENST00000564744 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
RPL4-208ENST00000564744 CARMIL1Q5VZK9 1371 aa14.17□□□□□ -0.14
RPL4-208ENST00000564744 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
RPL4-208ENST00000564744 EEA1Q15075 1411 aa14.15□□□□□ -0.14
RPL4-208ENST00000564744 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
RPL4-208ENST00000564744 CLASP1Q7Z460 1538 aa14.13□□□□□ -0.15
RPL4-208ENST00000564744 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
RPL4-208ENST00000564744 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms