RNA–Protein interactions for RNA: ENST00000564738.5

NEIL1-205, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-205ENST00000564738 NISCHQ9Y2I1 1504 aa46.04■■■■■ 4.96
NEIL1-205ENST00000564738 CCDC180Q9P1Z9 1646 aa40.86■■■■■ 4.13
NEIL1-205ENST00000564738 ABCC9O60706 1549 aa40.52■■■■■ 4.08
NEIL1-205ENST00000564738 DCAF8L2P0C7V8 631 aa38.89■■■■□ 3.82
NEIL1-205ENST00000564738 RB1CC1Q8TDY2 1594 aa38.68■■■■□ 3.78
NEIL1-205ENST00000564738 NACADO15069 1562 aa38.56■■■■□ 3.76
NEIL1-205ENST00000564738 ZCCHC6Q5VYS8 1495 aaKnown RBP38.26■■■■□ 3.72
NEIL1-205ENST00000564738 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
NEIL1-205ENST00000564738 PABPN1Q86U42 306 aaKnown RBP eCLIP37.96■■■■□ 3.67
NEIL1-205ENST00000564738 DCAF1Q9Y4B6 1507 aa37.95■■■■□ 3.67
NEIL1-205ENST00000564738 UNC13AQ9UPW8 1703 aa37.78■■■■□ 3.64
NEIL1-205ENST00000564738 BICRAQ9NZM4 1560 aa37.58■■■■□ 3.61
NEIL1-205ENST00000564738 DNAJC5BQ9UF47 199 aa37.56■■■■□ 3.6
NEIL1-205ENST00000564738 SCRIBQ14160 1630 aa37.47■■■■□ 3.59
NEIL1-205ENST00000564738 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
NEIL1-205ENST00000564738 EIF4G1Q04637 1599 aaKnown RBP36.59■■■■□ 3.45
NEIL1-205ENST00000564738 CC2D2AQ9P2K1 1620 aa36.53■■■■□ 3.44
NEIL1-205ENST00000564738 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
NEIL1-205ENST00000564738 SMARCA4P51532 1647 aa35.74■■■■□ 3.31
NEIL1-205ENST00000564738 ATAD2BQ9ULI0 1458 aa35.67■■■■□ 3.3
NEIL1-205ENST00000564738 NCAPD3P42695 1498 aa35.66■■■■□ 3.3
NEIL1-205ENST00000564738 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
NEIL1-205ENST00000564738 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
NEIL1-205ENST00000564738 SMARCA2P51531 1590 aa35.51■■■■□ 3.28
NEIL1-205ENST00000564738 HMGXB3Q12766 1538 aa35.36■■■■□ 3.25
NEIL1-205ENST00000564738 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
NEIL1-205ENST00000564738 PEG3Q9GZU2 1588 aa35.32■■■■□ 3.24
NEIL1-205ENST00000564738 WIZO95785 1651 aa35.13■■■■□ 3.21
NEIL1-205ENST00000564738 RSF1Q96T23 1441 aaPredicted RBP35.06■■■■□ 3.2
NEIL1-205ENST00000564738 NESP48681 1621 aa34.99■■■■□ 3.19
NEIL1-205ENST00000564738 ERCC6Q03468 1493 aa34.88■■■■□ 3.17
NEIL1-205ENST00000564738 LAMC3Q9Y6N6 1575 aa34.68■■■■□ 3.14
NEIL1-205ENST00000564738 TOP2AP11388 1531 aaKnown RBP34.66■■■■□ 3.14
NEIL1-205ENST00000564738 CADPSQ9ULU8 1353 aa34.66■■■■□ 3.14
NEIL1-205ENST00000564738 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
NEIL1-205ENST00000564738 CUX2O14529 1486 aa34.49■■■■□ 3.11
NEIL1-205ENST00000564738 KIF21AQ7Z4S6 1674 aa34.44■■■■□ 3.1
NEIL1-205ENST00000564738 CCDC88BA6NC98 1476 aa34.38■■■■□ 3.09
NEIL1-205ENST00000564738 CFTRP13569 1480 aa34.35■■■■□ 3.09
NEIL1-205ENST00000564738 THOC2Q8NI27 1593 aaKnown RBP34.35■■■■□ 3.09
NEIL1-205ENST00000564738 FANCD2Q9BXW9 1451 aa34.25■■■■□ 3.07
NEIL1-205ENST00000564738 SUPT5HO00267 1087 aaKnown RBP34.2■■■■□ 3.07
NEIL1-205ENST00000564738 MRC2Q9UBG0 1479 aa34.19■■■■□ 3.06
NEIL1-205ENST00000564738 CEP164Q9UPV0 1460 aa34.18■■■■□ 3.06
NEIL1-205ENST00000564738 WDR62O43379 1518 aa34.04■■■■□ 3.04
NEIL1-205ENST00000564738 URB2Q14146 1524 aaKnown RBP33.93■■■■□ 3.02
NEIL1-205ENST00000564738 DNAJC5Q9H3Z4 198 aa33.91■■■■□ 3.02
NEIL1-205ENST00000564738 PRDM2Q13029 1718 aa33.89■■■■□ 3.02
NEIL1-205ENST00000564738 TOPBP1Q92547 1522 aa33.66■■■□□ 2.98
NEIL1-205ENST00000564738 ABCC8Q09428 1581 aa33.55■■■□□ 2.96
NEIL1-205ENST00000564738 DNMBPQ6XZF7 1577 aa33.54■■■□□ 2.96
NEIL1-205ENST00000564738 IFT140Q96RY7 1462 aa33.48■■■□□ 2.95
NEIL1-205ENST00000564738 ZNF608Q9ULD9 1512 aaPredicted RBP33.45■■■□□ 2.95
NEIL1-205ENST00000564738 POLA1P09884 1462 aaPredicted RBP33.36■■■□□ 2.93
NEIL1-205ENST00000564738 CUX1P39880 1505 aa33.33■■■□□ 2.93
NEIL1-205ENST00000564738 RAD54L2Q9Y4B4 1467 aa33.32■■■□□ 2.92
NEIL1-205ENST00000564738 SOGA1O94964 1423 aa33.28■■■□□ 2.92
NEIL1-205ENST00000564738 AQRO60306 1485 aaKnown RBP eCLIP33.27■■■□□ 2.92
NEIL1-205ENST00000564738 FGD5Q6ZNL6 1462 aa33.26■■■□□ 2.92
NEIL1-205ENST00000564738 TARBP1Q13395 1621 aaKnown RBP33.25■■■□□ 2.91
NEIL1-205ENST00000564738 OSCARQ8IYS5 282 aa33.2■■■□□ 2.91
NEIL1-205ENST00000564738 TDRD9Q8NDG6 1382 aaKnown RBP33.2■■■□□ 2.9
NEIL1-205ENST00000564738 EIF4G3O43432 1585 aaKnown RBP33.17■■■□□ 2.9
NEIL1-205ENST00000564738 WRNQ14191 1432 aaPredicted RBP eCLIP33.03■■■□□ 2.88
NEIL1-205ENST00000564738 FBLN2P98095 1184 aa33.01■■■□□ 2.87
NEIL1-205ENST00000564738 SYNJ1O43426 1573 aa32.95■■■□□ 2.86
NEIL1-205ENST00000564738 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
NEIL1-205ENST00000564738 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
NEIL1-205ENST00000564738 SNAPC4Q5SXM2 1469 aa32.87■■■□□ 2.85
NEIL1-205ENST00000564738 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
NEIL1-205ENST00000564738 WDR97A6NE52 1622 aa32.85■■■□□ 2.85
NEIL1-205ENST00000564738 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
NEIL1-205ENST00000564738 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
NEIL1-205ENST00000564738 CHD1O14646 1710 aa32.81■■■□□ 2.84
NEIL1-205ENST00000564738 CHMP7Q8WUX9 453 aaPredicted RBP32.81■■■□□ 2.84
NEIL1-205ENST00000564738 TRIM41Q8WV44 630 aa32.81■■■□□ 2.84
NEIL1-205ENST00000564738 MAGI1Q96QZ7 1491 aaPredicted RBP32.74■■■□□ 2.83
NEIL1-205ENST00000564738 ABCA5Q8WWZ7 1642 aa32.71■■■□□ 2.83
NEIL1-205ENST00000564738 PBRM1Q86U86 1689 aa32.69■■■□□ 2.82
NEIL1-205ENST00000564738 SYNJ2O15056 1496 aa32.65■■■□□ 2.82
NEIL1-205ENST00000564738 RIMBP3CA6NJZ7 1639 aa32.59■■■□□ 2.81
NEIL1-205ENST00000564738 RIMBP3BA6NNM3 1639 aa32.59■■■□□ 2.81
NEIL1-205ENST00000564738 RIMBP3Q9UFD9 1639 aa32.59■■■□□ 2.81
NEIL1-205ENST00000564738 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
NEIL1-205ENST00000564738 CYB5RLQ6IPT4 315 aa32.46■■■□□ 2.79
NEIL1-205ENST00000564738 CLASP1Q7Z460 1538 aa32.45■■■□□ 2.78
NEIL1-205ENST00000564738 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
NEIL1-205ENST00000564738 ADAMTS12P58397 1594 aa32.44■■■□□ 2.78
NEIL1-205ENST00000564738 ERICH3Q5RHP9 1530 aa32.43■■■□□ 2.78
NEIL1-205ENST00000564738 GRIN2AQ12879 1464 aa32.42■■■□□ 2.78
NEIL1-205ENST00000564738 KIF27Q86VH2 1401 aa32.35■■■□□ 2.77
NEIL1-205ENST00000564738 IGF1RP08069 1367 aa32.33■■■□□ 2.77
NEIL1-205ENST00000564738 ARAP1Q96P48 1450 aa32.31■■■□□ 2.76
NEIL1-205ENST00000564738 NUP160Q12769 1436 aa32.28■■■□□ 2.76
NEIL1-205ENST00000564738 CEP170Q5SW79 1584 aa32.28■■■□□ 2.76
NEIL1-205ENST00000564738 CARMIL1Q5VZK9 1371 aa32.13■■■□□ 2.73
NEIL1-205ENST00000564738 RUSC2Q8N2Y8 1516 aa32.13■■■□□ 2.73
NEIL1-205ENST00000564738 ERCC6L2Q5T890 1561 aa32.11■■■□□ 2.73
NEIL1-205ENST00000564738 JPH4Q96JJ6 628 aa32.1■■■□□ 2.73
NEIL1-205ENST00000564738 CUL7Q14999 1698 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms