RNA–Protein interactions for RNA: ENST00000564682.5

SGF29-203, Transcript of SAGA complex associated factor 29, humanhuman

TSL 2

Gene SGF29, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGF29-203ENST00000564682 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
SGF29-203ENST00000564682 ABCC9O60706 1549 aa22.86■■□□□ 1.25
SGF29-203ENST00000564682 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
SGF29-203ENST00000564682 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
SGF29-203ENST00000564682 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
SGF29-203ENST00000564682 NACADO15069 1562 aa21.36■■□□□ 1.01
SGF29-203ENST00000564682 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
SGF29-203ENST00000564682 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
SGF29-203ENST00000564682 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.95
SGF29-203ENST00000564682 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
SGF29-203ENST00000564682 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
SGF29-203ENST00000564682 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
SGF29-203ENST00000564682 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
SGF29-203ENST00000564682 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
SGF29-203ENST00000564682 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
SGF29-203ENST00000564682 DNAJC5Q9H3Z4 198 aa20.52■□□□□ 0.88
SGF29-203ENST00000564682 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
SGF29-203ENST00000564682 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
SGF29-203ENST00000564682 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
SGF29-203ENST00000564682 CUX2O14529 1486 aa20.03■□□□□ 0.8
SGF29-203ENST00000564682 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
SGF29-203ENST00000564682 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
SGF29-203ENST00000564682 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
SGF29-203ENST00000564682 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
SGF29-203ENST00000564682 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
SGF29-203ENST00000564682 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
SGF29-203ENST00000564682 NESP48681 1621 aa19.49■□□□□ 0.71
SGF29-203ENST00000564682 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
SGF29-203ENST00000564682 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
SGF29-203ENST00000564682 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
SGF29-203ENST00000564682 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
SGF29-203ENST00000564682 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
SGF29-203ENST00000564682 BAZ1AQ9NRL2 1556 aaPredicted RBP19.25■□□□□ 0.67
SGF29-203ENST00000564682 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
SGF29-203ENST00000564682 PDS5BQ9NTI5 1447 aa19.23■□□□□ 0.67
SGF29-203ENST00000564682 WDR62O43379 1518 aa19.12■□□□□ 0.65
SGF29-203ENST00000564682 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
SGF29-203ENST00000564682 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
SGF29-203ENST00000564682 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
SGF29-203ENST00000564682 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
SGF29-203ENST00000564682 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
SGF29-203ENST00000564682 FANCD2Q9BXW9 1451 aa18.84■□□□□ 0.61
SGF29-203ENST00000564682 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
SGF29-203ENST00000564682 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
SGF29-203ENST00000564682 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
SGF29-203ENST00000564682 CFTRP13569 1480 aa18.77■□□□□ 0.59
SGF29-203ENST00000564682 WIZO95785 1651 aa18.73■□□□□ 0.59
SGF29-203ENST00000564682 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
SGF29-203ENST00000564682 ARHGEF11O15085 1522 aa18.68■□□□□ 0.58
SGF29-203ENST00000564682 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
SGF29-203ENST00000564682 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
SGF29-203ENST00000564682 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
SGF29-203ENST00000564682 PRDM2Q13029 1718 aa18.52■□□□□ 0.56
SGF29-203ENST00000564682 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
SGF29-203ENST00000564682 ARAP1Q96P48 1450 aa18.46■□□□□ 0.55
SGF29-203ENST00000564682 RSF1Q96T23 1441 aaPredicted RBP18.45■□□□□ 0.54
SGF29-203ENST00000564682 CYB5RLQ6IPT4 315 aa18.44■□□□□ 0.54
SGF29-203ENST00000564682 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
SGF29-203ENST00000564682 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
SGF29-203ENST00000564682 CHD1O14646 1710 aa18.37■□□□□ 0.53
SGF29-203ENST00000564682 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
SGF29-203ENST00000564682 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
SGF29-203ENST00000564682 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.52
SGF29-203ENST00000564682 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.52
SGF29-203ENST00000564682 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
SGF29-203ENST00000564682 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
SGF29-203ENST00000564682 POLA1P09884 1462 aaPredicted RBP18.22■□□□□ 0.51
SGF29-203ENST00000564682 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
SGF29-203ENST00000564682 WDR97A6NE52 1622 aa18.19■□□□□ 0.5
SGF29-203ENST00000564682 FBLN2P98095 1184 aa18.16■□□□□ 0.5
SGF29-203ENST00000564682 SYNJ1O43426 1573 aa18.14■□□□□ 0.49
SGF29-203ENST00000564682 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
SGF29-203ENST00000564682 MAGI1Q96QZ7 1491 aaPredicted RBP18.11■□□□□ 0.49
SGF29-203ENST00000564682 RAD54L2Q9Y4B4 1467 aa18.09■□□□□ 0.49
SGF29-203ENST00000564682 TDRD9Q8NDG6 1382 aaKnown RBP18.07■□□□□ 0.48
SGF29-203ENST00000564682 SOGA1O94964 1423 aa18.06■□□□□ 0.48
SGF29-203ENST00000564682 SYNJ2O15056 1496 aa18.04■□□□□ 0.48
SGF29-203ENST00000564682 GRIN2BQ13224 1484 aa18.02■□□□□ 0.48
SGF29-203ENST00000564682 GAPVD1Q14C86 1478 aa18.02■□□□□ 0.48
SGF29-203ENST00000564682 CHMP7Q8WUX9 453 aaPredicted RBP18.01■□□□□ 0.47
SGF29-203ENST00000564682 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
SGF29-203ENST00000564682 CUX1P39880 1505 aa17.92■□□□□ 0.46
SGF29-203ENST00000564682 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
SGF29-203ENST00000564682 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
SGF29-203ENST00000564682 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.45
SGF29-203ENST00000564682 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
SGF29-203ENST00000564682 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
SGF29-203ENST00000564682 NUP160Q12769 1436 aa17.8■□□□□ 0.44
SGF29-203ENST00000564682 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
SGF29-203ENST00000564682 SHROOM2Q13796 1616 aa17.77■□□□□ 0.44
SGF29-203ENST00000564682 KIF13AQ9H1H9 1805 aa17.77■□□□□ 0.43
SGF29-203ENST00000564682 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
SGF29-203ENST00000564682 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.42
SGF29-203ENST00000564682 ABCC10Q5T3U5 1492 aa17.64■□□□□ 0.41
SGF29-203ENST00000564682 MAPKBP1O60336 1514 aa17.62■□□□□ 0.41
SGF29-203ENST00000564682 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
SGF29-203ENST00000564682 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.41
SGF29-203ENST00000564682 DIP2BQ9P265 1576 aa17.59■□□□□ 0.41
SGF29-203ENST00000564682 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
SGF29-203ENST00000564682 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms