RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 NISCHQ9Y2I1 1504 aa37.02■■■■□ 3.52
CDH11-209ENST00000564317 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
CDH11-209ENST00000564317 ABCC9O60706 1549 aa31.6■■■□□ 2.65
CDH11-209ENST00000564317 ZCCHC6Q5VYS8 1495 aaKnown RBP30.96■■■□□ 2.55
CDH11-209ENST00000564317 DCAF8L2P0C7V8 631 aa30.7■■■□□ 2.51
CDH11-209ENST00000564317 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
CDH11-209ENST00000564317 NACADO15069 1562 aa30.62■■■□□ 2.49
CDH11-209ENST00000564317 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.49
CDH11-209ENST00000564317 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
CDH11-209ENST00000564317 SCRIBQ14160 1630 aa29.92■■■□□ 2.38
CDH11-209ENST00000564317 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
CDH11-209ENST00000564317 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
CDH11-209ENST00000564317 PABPN1Q86U42 306 aaKnown RBP eCLIP29.61■■■□□ 2.33
CDH11-209ENST00000564317 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
CDH11-209ENST00000564317 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
CDH11-209ENST00000564317 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
CDH11-209ENST00000564317 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
CDH11-209ENST00000564317 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
CDH11-209ENST00000564317 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
CDH11-209ENST00000564317 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
CDH11-209ENST00000564317 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
CDH11-209ENST00000564317 RSF1Q96T23 1441 aaPredicted RBP28.4■■■□□ 2.14
CDH11-209ENST00000564317 ATAD2BQ9ULI0 1458 aa28.37■■■□□ 2.13
CDH11-209ENST00000564317 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
CDH11-209ENST00000564317 SMARCA2P51531 1590 aa28.32■■■□□ 2.12
CDH11-209ENST00000564317 WIZO95785 1651 aa28.28■■■□□ 2.12
CDH11-209ENST00000564317 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
CDH11-209ENST00000564317 HMGXB3Q12766 1538 aa28.17■■■□□ 2.1
CDH11-209ENST00000564317 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
CDH11-209ENST00000564317 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
CDH11-209ENST00000564317 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
CDH11-209ENST00000564317 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
CDH11-209ENST00000564317 NESP48681 1621 aa27.5■■□□□ 1.99
CDH11-209ENST00000564317 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
CDH11-209ENST00000564317 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
CDH11-209ENST00000564317 CFTRP13569 1480 aa27.41■■□□□ 1.98
CDH11-209ENST00000564317 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
CDH11-209ENST00000564317 PRDM2Q13029 1718 aa27.2■■□□□ 1.94
CDH11-209ENST00000564317 ERCC6Q03468 1493 aa27.16■■□□□ 1.94
CDH11-209ENST00000564317 FANCD2Q9BXW9 1451 aa27.16■■□□□ 1.94
CDH11-209ENST00000564317 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
CDH11-209ENST00000564317 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
CDH11-209ENST00000564317 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
CDH11-209ENST00000564317 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
CDH11-209ENST00000564317 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.89
CDH11-209ENST00000564317 WDR62O43379 1518 aa26.86■■□□□ 1.89
CDH11-209ENST00000564317 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
CDH11-209ENST00000564317 TOPBP1Q92547 1522 aa26.79■■□□□ 1.88
CDH11-209ENST00000564317 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
CDH11-209ENST00000564317 CUX1P39880 1505 aa26.78■■□□□ 1.88
CDH11-209ENST00000564317 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
CDH11-209ENST00000564317 CUX2O14529 1486 aa26.7■■□□□ 1.87
CDH11-209ENST00000564317 SYNJ1O43426 1573 aa26.7■■□□□ 1.86
CDH11-209ENST00000564317 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
CDH11-209ENST00000564317 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
CDH11-209ENST00000564317 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
CDH11-209ENST00000564317 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
CDH11-209ENST00000564317 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
CDH11-209ENST00000564317 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
CDH11-209ENST00000564317 SOGA1O94964 1423 aa26.47■■□□□ 1.83
CDH11-209ENST00000564317 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
CDH11-209ENST00000564317 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
CDH11-209ENST00000564317 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
CDH11-209ENST00000564317 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
CDH11-209ENST00000564317 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
CDH11-209ENST00000564317 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
CDH11-209ENST00000564317 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
CDH11-209ENST00000564317 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
CDH11-209ENST00000564317 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.79
CDH11-209ENST00000564317 ABCA5Q8WWZ7 1642 aa26.22■■□□□ 1.79
CDH11-209ENST00000564317 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
CDH11-209ENST00000564317 KIF27Q86VH2 1401 aa26.12■■□□□ 1.77
CDH11-209ENST00000564317 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
CDH11-209ENST00000564317 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
CDH11-209ENST00000564317 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
CDH11-209ENST00000564317 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
CDH11-209ENST00000564317 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
CDH11-209ENST00000564317 IGF1RP08069 1367 aa25.98■■□□□ 1.75
CDH11-209ENST00000564317 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
CDH11-209ENST00000564317 ADAMTS12P58397 1594 aa25.95■■□□□ 1.74
CDH11-209ENST00000564317 EEA1Q15075 1411 aa25.9■■□□□ 1.74
CDH11-209ENST00000564317 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
CDH11-209ENST00000564317 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
CDH11-209ENST00000564317 FAM9AQ8IZU1 332 aaPredicted RBP25.87■■□□□ 1.73
CDH11-209ENST00000564317 CUL7Q14999 1698 aa25.87■■□□□ 1.73
CDH11-209ENST00000564317 CHD1O14646 1710 aa25.84■■□□□ 1.73
CDH11-209ENST00000564317 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
CDH11-209ENST00000564317 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
CDH11-209ENST00000564317 FBLN2P98095 1184 aa25.81■■□□□ 1.72
CDH11-209ENST00000564317 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
CDH11-209ENST00000564317 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
CDH11-209ENST00000564317 PRXQ9BXM0 1461 aa25.78■■□□□ 1.72
CDH11-209ENST00000564317 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
CDH11-209ENST00000564317 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
CDH11-209ENST00000564317 NUP160Q12769 1436 aa25.66■■□□□ 1.7
CDH11-209ENST00000564317 KIF21BO75037 1637 aa25.65■■□□□ 1.7
CDH11-209ENST00000564317 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
CDH11-209ENST00000564317 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
CDH11-209ENST00000564317 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
CDH11-209ENST00000564317 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms