RNA–Protein interactions for RNA: ENST00000564275.5

SCNN1B-203, Transcript of sodium channel epithelial 1 beta subunit, humanhuman

TSL 3

Gene SCNN1B, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1B-203ENST00000564275 NISCHQ9Y2I1 1504 aa30.37■■■□□ 2.45
SCNN1B-203ENST00000564275 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
SCNN1B-203ENST00000564275 ABCC9O60706 1549 aa25.71■■□□□ 1.71
SCNN1B-203ENST00000564275 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
SCNN1B-203ENST00000564275 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
SCNN1B-203ENST00000564275 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
SCNN1B-203ENST00000564275 NACADO15069 1562 aa25.01■■□□□ 1.59
SCNN1B-203ENST00000564275 MYO15BQ96JP2 1530 aa24.99■■□□□ 1.59
SCNN1B-203ENST00000564275 RB1CC1Q8TDY2 1594 aa24.92■■□□□ 1.58
SCNN1B-203ENST00000564275 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
SCNN1B-203ENST00000564275 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
SCNN1B-203ENST00000564275 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
SCNN1B-203ENST00000564275 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
SCNN1B-203ENST00000564275 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
SCNN1B-203ENST00000564275 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
SCNN1B-203ENST00000564275 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
SCNN1B-203ENST00000564275 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
SCNN1B-203ENST00000564275 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
SCNN1B-203ENST00000564275 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
SCNN1B-203ENST00000564275 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
SCNN1B-203ENST00000564275 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
SCNN1B-203ENST00000564275 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
SCNN1B-203ENST00000564275 WIZO95785 1651 aa23.23■■□□□ 1.31
SCNN1B-203ENST00000564275 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
SCNN1B-203ENST00000564275 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
SCNN1B-203ENST00000564275 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
SCNN1B-203ENST00000564275 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
SCNN1B-203ENST00000564275 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
SCNN1B-203ENST00000564275 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
SCNN1B-203ENST00000564275 HMGXB3Q12766 1538 aa22.99■■□□□ 1.27
SCNN1B-203ENST00000564275 TOP2AP11388 1531 aaKnown RBP22.97■■□□□ 1.27
SCNN1B-203ENST00000564275 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
SCNN1B-203ENST00000564275 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
SCNN1B-203ENST00000564275 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
SCNN1B-203ENST00000564275 CFTRP13569 1480 aa22.42■■□□□ 1.18
SCNN1B-203ENST00000564275 NESP48681 1621 aa22.4■■□□□ 1.18
SCNN1B-203ENST00000564275 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
SCNN1B-203ENST00000564275 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
SCNN1B-203ENST00000564275 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
SCNN1B-203ENST00000564275 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
SCNN1B-203ENST00000564275 TRIM41Q8WV44 630 aa22.16■■□□□ 1.14
SCNN1B-203ENST00000564275 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.14
SCNN1B-203ENST00000564275 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
SCNN1B-203ENST00000564275 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
SCNN1B-203ENST00000564275 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
SCNN1B-203ENST00000564275 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
SCNN1B-203ENST00000564275 LOC105371045A0A1W2PR82 267 aa21.96■■□□□ 1.11
SCNN1B-203ENST00000564275 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
SCNN1B-203ENST00000564275 CUX1P39880 1505 aa21.94■■□□□ 1.1
SCNN1B-203ENST00000564275 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
SCNN1B-203ENST00000564275 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
SCNN1B-203ENST00000564275 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
SCNN1B-203ENST00000564275 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
SCNN1B-203ENST00000564275 TOP2BQ02880 1626 aa21.9■■□□□ 1.1
SCNN1B-203ENST00000564275 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
SCNN1B-203ENST00000564275 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
SCNN1B-203ENST00000564275 WDR62O43379 1518 aa21.84■■□□□ 1.09
SCNN1B-203ENST00000564275 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
SCNN1B-203ENST00000564275 FAM9AQ8IZU1 332 aaPredicted RBP21.76■■□□□ 1.07
SCNN1B-203ENST00000564275 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
SCNN1B-203ENST00000564275 SOGA1O94964 1423 aa21.71■■□□□ 1.07
SCNN1B-203ENST00000564275 RAD54L2Q9Y4B4 1467 aa21.68■■□□□ 1.06
SCNN1B-203ENST00000564275 CUX2O14529 1486 aa21.66■■□□□ 1.06
SCNN1B-203ENST00000564275 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
SCNN1B-203ENST00000564275 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
SCNN1B-203ENST00000564275 ABCA10Q8WWZ4 1543 aa21.59■■□□□ 1.05
SCNN1B-203ENST00000564275 WDR97A6NE52 1622 aa21.54■■□□□ 1.04
SCNN1B-203ENST00000564275 EEA1Q15075 1411 aa21.54■■□□□ 1.04
SCNN1B-203ENST00000564275 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
SCNN1B-203ENST00000564275 KIF27Q86VH2 1401 aa21.53■■□□□ 1.04
SCNN1B-203ENST00000564275 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.04
SCNN1B-203ENST00000564275 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
SCNN1B-203ENST00000564275 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.03
SCNN1B-203ENST00000564275 GAPVD1Q14C86 1478 aa21.46■■□□□ 1.03
SCNN1B-203ENST00000564275 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
SCNN1B-203ENST00000564275 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
SCNN1B-203ENST00000564275 EIF4G3O43432 1585 aaKnown RBP21.42■■□□□ 1.02
SCNN1B-203ENST00000564275 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
SCNN1B-203ENST00000564275 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.01
SCNN1B-203ENST00000564275 IGF1RP08069 1367 aa21.37■■□□□ 1.01
SCNN1B-203ENST00000564275 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
SCNN1B-203ENST00000564275 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
SCNN1B-203ENST00000564275 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
SCNN1B-203ENST00000564275 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
SCNN1B-203ENST00000564275 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
SCNN1B-203ENST00000564275 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
SCNN1B-203ENST00000564275 CUL7Q14999 1698 aa21.27■□□□□ 0.99
SCNN1B-203ENST00000564275 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
SCNN1B-203ENST00000564275 GOLGA3Q08378 1498 aa21.25■□□□□ 0.99
SCNN1B-203ENST00000564275 KIF21BO75037 1637 aa21.24■□□□□ 0.99
SCNN1B-203ENST00000564275 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
SCNN1B-203ENST00000564275 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
SCNN1B-203ENST00000564275 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
SCNN1B-203ENST00000564275 FBLN2P98095 1184 aa21.2■□□□□ 0.98
SCNN1B-203ENST00000564275 ADAMTS12P58397 1594 aa21.2■□□□□ 0.98
SCNN1B-203ENST00000564275 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
SCNN1B-203ENST00000564275 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
SCNN1B-203ENST00000564275 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
SCNN1B-203ENST00000564275 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
SCNN1B-203ENST00000564275 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms