RNA–Protein interactions for RNA: ENST00000564201.1

NR4A1-220, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-220ENST00000564201 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
NR4A1-220ENST00000564201 AEBP2Q6ZN18 517 aaPredicted RBP25.22■■□□□ 1.63
NR4A1-220ENST00000564201 CCDC180Q9P1Z9 1646 aa24.87■■□□□ 1.57
NR4A1-220ENST00000564201 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
NR4A1-220ENST00000564201 ABCC9O60706 1549 aa24.1■■□□□ 1.45
NR4A1-220ENST00000564201 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
NR4A1-220ENST00000564201 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
NR4A1-220ENST00000564201 NACADO15069 1562 aa23.31■■□□□ 1.32
NR4A1-220ENST00000564201 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
NR4A1-220ENST00000564201 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.32
NR4A1-220ENST00000564201 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
NR4A1-220ENST00000564201 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
NR4A1-220ENST00000564201 UNC13AQ9UPW8 1703 aa22.78■■□□□ 1.24
NR4A1-220ENST00000564201 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
NR4A1-220ENST00000564201 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
NR4A1-220ENST00000564201 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
NR4A1-220ENST00000564201 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
NR4A1-220ENST00000564201 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
NR4A1-220ENST00000564201 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
NR4A1-220ENST00000564201 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
NR4A1-220ENST00000564201 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
NR4A1-220ENST00000564201 CC2D2AQ9P2K1 1620 aa21.78■■□□□ 1.08
NR4A1-220ENST00000564201 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
NR4A1-220ENST00000564201 RSF1Q96T23 1441 aaPredicted RBP21.65■■□□□ 1.06
NR4A1-220ENST00000564201 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
NR4A1-220ENST00000564201 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
NR4A1-220ENST00000564201 SMARCA2P51531 1590 aa21.58■■□□□ 1.05
NR4A1-220ENST00000564201 WIZO95785 1651 aa21.58■■□□□ 1.05
NR4A1-220ENST00000564201 PEG3Q9GZU2 1588 aa21.53■■□□□ 1.04
NR4A1-220ENST00000564201 NCAPD3P42695 1498 aa21.52■■□□□ 1.03
NR4A1-220ENST00000564201 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
NR4A1-220ENST00000564201 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
NR4A1-220ENST00000564201 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
NR4A1-220ENST00000564201 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
NR4A1-220ENST00000564201 TOP2AP11388 1531 aaKnown RBP21.33■■□□□ 1
NR4A1-220ENST00000564201 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
NR4A1-220ENST00000564201 NESP48681 1621 aa20.96■□□□□ 0.95
NR4A1-220ENST00000564201 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
NR4A1-220ENST00000564201 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.94
NR4A1-220ENST00000564201 CFTRP13569 1480 aa20.87■□□□□ 0.93
NR4A1-220ENST00000564201 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
NR4A1-220ENST00000564201 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
NR4A1-220ENST00000564201 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
NR4A1-220ENST00000564201 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
NR4A1-220ENST00000564201 KIF21AQ7Z4S6 1674 aa20.7■□□□□ 0.91
NR4A1-220ENST00000564201 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
NR4A1-220ENST00000564201 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
NR4A1-220ENST00000564201 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
NR4A1-220ENST00000564201 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
NR4A1-220ENST00000564201 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
NR4A1-220ENST00000564201 WDR62O43379 1518 aa20.43■□□□□ 0.86
NR4A1-220ENST00000564201 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
NR4A1-220ENST00000564201 TOPBP1Q92547 1522 aa20.42■□□□□ 0.86
NR4A1-220ENST00000564201 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
NR4A1-220ENST00000564201 CUX1P39880 1505 aa20.4■□□□□ 0.86
NR4A1-220ENST00000564201 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
NR4A1-220ENST00000564201 CUX2O14529 1486 aa20.31■□□□□ 0.84
NR4A1-220ENST00000564201 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
NR4A1-220ENST00000564201 BIVM-ERCC5R4GMW8 1640 aa20.29■□□□□ 0.84
NR4A1-220ENST00000564201 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
NR4A1-220ENST00000564201 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
NR4A1-220ENST00000564201 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
NR4A1-220ENST00000564201 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
NR4A1-220ENST00000564201 SOGA1O94964 1423 aa20.21■□□□□ 0.83
NR4A1-220ENST00000564201 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
NR4A1-220ENST00000564201 TARBP1Q13395 1621 aaKnown RBP20.14■□□□□ 0.81
NR4A1-220ENST00000564201 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
NR4A1-220ENST00000564201 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
NR4A1-220ENST00000564201 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
NR4A1-220ENST00000564201 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
NR4A1-220ENST00000564201 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.8
NR4A1-220ENST00000564201 PLPPR3Q6T4P5 718 aa20.04■□□□□ 0.8
NR4A1-220ENST00000564201 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
NR4A1-220ENST00000564201 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
NR4A1-220ENST00000564201 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
NR4A1-220ENST00000564201 KIF27Q86VH2 1401 aa19.95■□□□□ 0.78
NR4A1-220ENST00000564201 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
NR4A1-220ENST00000564201 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
NR4A1-220ENST00000564201 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
NR4A1-220ENST00000564201 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
NR4A1-220ENST00000564201 FOXD1Q16676 465 aa19.88■□□□□ 0.77
NR4A1-220ENST00000564201 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
NR4A1-220ENST00000564201 ERICH3Q5RHP9 1530 aa19.83■□□□□ 0.77
NR4A1-220ENST00000564201 IGF1RP08069 1367 aa19.83■□□□□ 0.76
NR4A1-220ENST00000564201 FBLN2P98095 1184 aa19.8■□□□□ 0.76
NR4A1-220ENST00000564201 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
NR4A1-220ENST00000564201 EEA1Q15075 1411 aa19.78■□□□□ 0.76
NR4A1-220ENST00000564201 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
NR4A1-220ENST00000564201 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
NR4A1-220ENST00000564201 ADAMTS12P58397 1594 aa19.75■□□□□ 0.75
NR4A1-220ENST00000564201 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
NR4A1-220ENST00000564201 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
NR4A1-220ENST00000564201 CUL7Q14999 1698 aa19.73■□□□□ 0.75
NR4A1-220ENST00000564201 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
NR4A1-220ENST00000564201 CHD1O14646 1710 aa19.71■□□□□ 0.75
NR4A1-220ENST00000564201 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
NR4A1-220ENST00000564201 GRIN2AQ12879 1464 aa19.65■□□□□ 0.74
NR4A1-220ENST00000564201 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
NR4A1-220ENST00000564201 PRXQ9BXM0 1461 aa19.64■□□□□ 0.73
NR4A1-220ENST00000564201 OSCARQ8IYS5 282 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms