RNA–Protein interactions for RNA: ENST00000564184.1

GRAMD2A-205, Transcript of GRAM domain containing 2A, humanhuman

TSL 4

Gene GRAMD2A, Length 601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2A-205ENST00000564184 NISCHQ9Y2I1 1504 aa18.52■□□□□ 0.56
GRAMD2A-205ENST00000564184 ABCC9O60706 1549 aa17.16■□□□□ 0.34
GRAMD2A-205ENST00000564184 CCDC180Q9P1Z9 1646 aa16.73■□□□□ 0.27
GRAMD2A-205ENST00000564184 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
GRAMD2A-205ENST00000564184 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
GRAMD2A-205ENST00000564184 NACADO15069 1562 aa16■□□□□ 0.15
GRAMD2A-205ENST00000564184 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
GRAMD2A-205ENST00000564184 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
GRAMD2A-205ENST00000564184 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
GRAMD2A-205ENST00000564184 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
GRAMD2A-205ENST00000564184 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
GRAMD2A-205ENST00000564184 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
GRAMD2A-205ENST00000564184 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
GRAMD2A-205ENST00000564184 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
GRAMD2A-205ENST00000564184 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.07
GRAMD2A-205ENST00000564184 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
GRAMD2A-205ENST00000564184 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
GRAMD2A-205ENST00000564184 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
GRAMD2A-205ENST00000564184 SCRIBQ14160 1630 aa15.16■□□□□ 0.02
GRAMD2A-205ENST00000564184 CUX2O14529 1486 aa15.07■□□□□ 0
GRAMD2A-205ENST00000564184 ERCC6Q03468 1493 aa14.85□□□□□ -0.03
GRAMD2A-205ENST00000564184 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
GRAMD2A-205ENST00000564184 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
GRAMD2A-205ENST00000564184 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
GRAMD2A-205ENST00000564184 NESP48681 1621 aa14.62□□□□□ -0.07
GRAMD2A-205ENST00000564184 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
GRAMD2A-205ENST00000564184 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
GRAMD2A-205ENST00000564184 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
GRAMD2A-205ENST00000564184 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
GRAMD2A-205ENST00000564184 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
GRAMD2A-205ENST00000564184 BAZ1BQ9UIG0 1483 aaKnown RBP14.47□□□□□ -0.09
GRAMD2A-205ENST00000564184 PDS5BQ9NTI5 1447 aa14.47□□□□□ -0.09
GRAMD2A-205ENST00000564184 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
GRAMD2A-205ENST00000564184 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
GRAMD2A-205ENST00000564184 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
GRAMD2A-205ENST00000564184 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
GRAMD2A-205ENST00000564184 WDR62O43379 1518 aa14.31□□□□□ -0.12
GRAMD2A-205ENST00000564184 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
GRAMD2A-205ENST00000564184 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
GRAMD2A-205ENST00000564184 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
GRAMD2A-205ENST00000564184 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
GRAMD2A-205ENST00000564184 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
GRAMD2A-205ENST00000564184 CFTRP13569 1480 aa14.1□□□□□ -0.15
GRAMD2A-205ENST00000564184 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
GRAMD2A-205ENST00000564184 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
GRAMD2A-205ENST00000564184 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
GRAMD2A-205ENST00000564184 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
GRAMD2A-205ENST00000564184 ARHGEF11O15085 1522 aa14.02□□□□□ -0.16
GRAMD2A-205ENST00000564184 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
GRAMD2A-205ENST00000564184 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
GRAMD2A-205ENST00000564184 WIZO95785 1651 aa13.94□□□□□ -0.18
GRAMD2A-205ENST00000564184 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
GRAMD2A-205ENST00000564184 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
GRAMD2A-205ENST00000564184 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
GRAMD2A-205ENST00000564184 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
GRAMD2A-205ENST00000564184 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.2
GRAMD2A-205ENST00000564184 AEBP2Q6ZN18 517 aaPredicted RBP13.8□□□□□ -0.2
GRAMD2A-205ENST00000564184 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
GRAMD2A-205ENST00000564184 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
GRAMD2A-205ENST00000564184 EIF4G3O43432 1585 aaKnown RBP13.76□□□□□ -0.21
GRAMD2A-205ENST00000564184 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.21
GRAMD2A-205ENST00000564184 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
GRAMD2A-205ENST00000564184 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
GRAMD2A-205ENST00000564184 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
GRAMD2A-205ENST00000564184 FBLN2P98095 1184 aa13.68□□□□□ -0.22
GRAMD2A-205ENST00000564184 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
GRAMD2A-205ENST00000564184 CHD1O14646 1710 aa13.65□□□□□ -0.22
GRAMD2A-205ENST00000564184 POLA1P09884 1462 aaPredicted RBP13.65□□□□□ -0.22
GRAMD2A-205ENST00000564184 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
GRAMD2A-205ENST00000564184 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
GRAMD2A-205ENST00000564184 SOGA1O94964 1423 aa13.58□□□□□ -0.24
GRAMD2A-205ENST00000564184 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.24
GRAMD2A-205ENST00000564184 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
GRAMD2A-205ENST00000564184 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
GRAMD2A-205ENST00000564184 MAGI1Q96QZ7 1491 aaPredicted RBP13.57□□□□□ -0.24
GRAMD2A-205ENST00000564184 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
GRAMD2A-205ENST00000564184 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
GRAMD2A-205ENST00000564184 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
GRAMD2A-205ENST00000564184 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
GRAMD2A-205ENST00000564184 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
GRAMD2A-205ENST00000564184 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
GRAMD2A-205ENST00000564184 CUX1P39880 1505 aa13.39□□□□□ -0.27
GRAMD2A-205ENST00000564184 NUP160Q12769 1436 aa13.36□□□□□ -0.27
GRAMD2A-205ENST00000564184 ABCA10Q8WWZ4 1543 aa13.34□□□□□ -0.27
GRAMD2A-205ENST00000564184 ERCC6L2Q5T890 1561 aa13.34□□□□□ -0.27
GRAMD2A-205ENST00000564184 GRIN2AQ12879 1464 aa13.33□□□□□ -0.28
GRAMD2A-205ENST00000564184 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
GRAMD2A-205ENST00000564184 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
GRAMD2A-205ENST00000564184 ABCA5Q8WWZ7 1642 aa13.29□□□□□ -0.28
GRAMD2A-205ENST00000564184 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
GRAMD2A-205ENST00000564184 ABCC10Q5T3U5 1492 aa13.27□□□□□ -0.29
GRAMD2A-205ENST00000564184 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
GRAMD2A-205ENST00000564184 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
GRAMD2A-205ENST00000564184 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
GRAMD2A-205ENST00000564184 FAM69CQ0P6D2 419 aa13.24□□□□□ -0.29
GRAMD2A-205ENST00000564184 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
GRAMD2A-205ENST00000564184 KIF13AQ9H1H9 1805 aa13.21□□□□□ -0.29
GRAMD2A-205ENST00000564184 MAPKBP1O60336 1514 aa13.21□□□□□ -0.29
GRAMD2A-205ENST00000564184 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.3
GRAMD2A-205ENST00000564184 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms