RNA–Protein interactions for RNA: ENST00000564056.1

IRF8-204, Transcript of interferon regulatory factor 8, humanhuman

TSL 3

Gene IRF8, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-204ENST00000564056 NISCHQ9Y2I1 1504 aa35.82■■■■□ 3.32
IRF8-204ENST00000564056 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
IRF8-204ENST00000564056 ABCC9O60706 1549 aa30.64■■■□□ 2.5
IRF8-204ENST00000564056 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
IRF8-204ENST00000564056 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
IRF8-204ENST00000564056 NACADO15069 1562 aa29.65■■■□□ 2.34
IRF8-204ENST00000564056 RB1CC1Q8TDY2 1594 aa29.62■■■□□ 2.33
IRF8-204ENST00000564056 DCAF1Q9Y4B6 1507 aa29.57■■■□□ 2.32
IRF8-204ENST00000564056 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
IRF8-204ENST00000564056 SCRIBQ14160 1630 aa29.05■■■□□ 2.24
IRF8-204ENST00000564056 UNC13AQ9UPW8 1703 aa28.93■■■□□ 2.22
IRF8-204ENST00000564056 SHROOM4Q9ULL8 1493 aa28.82■■■□□ 2.2
IRF8-204ENST00000564056 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.19
IRF8-204ENST00000564056 BICRAQ9NZM4 1560 aa28.6■■■□□ 2.17
IRF8-204ENST00000564056 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
IRF8-204ENST00000564056 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
IRF8-204ENST00000564056 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
IRF8-204ENST00000564056 SMARCA4P51532 1647 aa27.73■■■□□ 2.03
IRF8-204ENST00000564056 CC2D2AQ9P2K1 1620 aa27.68■■■□□ 2.02
IRF8-204ENST00000564056 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
IRF8-204ENST00000564056 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2.01
IRF8-204ENST00000564056 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
IRF8-204ENST00000564056 SMARCA2P51531 1590 aa27.47■■□□□ 1.99
IRF8-204ENST00000564056 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
IRF8-204ENST00000564056 WIZO95785 1651 aa27.42■■□□□ 1.98
IRF8-204ENST00000564056 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
IRF8-204ENST00000564056 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
IRF8-204ENST00000564056 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
IRF8-204ENST00000564056 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
IRF8-204ENST00000564056 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
IRF8-204ENST00000564056 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
IRF8-204ENST00000564056 CCDC88BA6NC98 1476 aa26.8■■□□□ 1.88
IRF8-204ENST00000564056 NESP48681 1621 aa26.61■■□□□ 1.85
IRF8-204ENST00000564056 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
IRF8-204ENST00000564056 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
IRF8-204ENST00000564056 CFTRP13569 1480 aa26.49■■□□□ 1.83
IRF8-204ENST00000564056 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
IRF8-204ENST00000564056 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
IRF8-204ENST00000564056 PRDM2Q13029 1718 aa26.41■■□□□ 1.82
IRF8-204ENST00000564056 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
IRF8-204ENST00000564056 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
IRF8-204ENST00000564056 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
IRF8-204ENST00000564056 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
IRF8-204ENST00000564056 THOC2Q8NI27 1593 aaKnown RBP26.05■■□□□ 1.76
IRF8-204ENST00000564056 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
IRF8-204ENST00000564056 URB2Q14146 1524 aaKnown RBP25.99■■□□□ 1.75
IRF8-204ENST00000564056 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
IRF8-204ENST00000564056 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
IRF8-204ENST00000564056 WDR62O43379 1518 aa25.96■■□□□ 1.75
IRF8-204ENST00000564056 TOPBP1Q92547 1522 aa25.94■■□□□ 1.74
IRF8-204ENST00000564056 CUX1P39880 1505 aa25.9■■□□□ 1.74
IRF8-204ENST00000564056 CUX2O14529 1486 aa25.85■■□□□ 1.73
IRF8-204ENST00000564056 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
IRF8-204ENST00000564056 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
IRF8-204ENST00000564056 BIVM-ERCC5R4GMW8 1640 aa25.8■■□□□ 1.72
IRF8-204ENST00000564056 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
IRF8-204ENST00000564056 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
IRF8-204ENST00000564056 POLA1P09884 1462 aaPredicted RBP25.74■■□□□ 1.71
IRF8-204ENST00000564056 SOGA1O94964 1423 aa25.7■■□□□ 1.7
IRF8-204ENST00000564056 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
IRF8-204ENST00000564056 IFT140Q96RY7 1462 aa25.67■■□□□ 1.7
IRF8-204ENST00000564056 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
IRF8-204ENST00000564056 TARBP1Q13395 1621 aaKnown RBP25.57■■□□□ 1.68
IRF8-204ENST00000564056 TDRD9Q8NDG6 1382 aaKnown RBP25.51■■□□□ 1.67
IRF8-204ENST00000564056 ZNF608Q9ULD9 1512 aaPredicted RBP25.51■■□□□ 1.67
IRF8-204ENST00000564056 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
IRF8-204ENST00000564056 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
IRF8-204ENST00000564056 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.67
IRF8-204ENST00000564056 EIF4G3O43432 1585 aaKnown RBP25.45■■□□□ 1.66
IRF8-204ENST00000564056 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
IRF8-204ENST00000564056 KIF27Q86VH2 1401 aa25.4■■□□□ 1.66
IRF8-204ENST00000564056 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
IRF8-204ENST00000564056 PBRM1Q86U86 1689 aa25.35■■□□□ 1.65
IRF8-204ENST00000564056 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
IRF8-204ENST00000564056 GRIN2BQ13224 1484 aa25.32■■□□□ 1.64
IRF8-204ENST00000564056 RUSC2Q8N2Y8 1516 aa25.27■■□□□ 1.64
IRF8-204ENST00000564056 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
IRF8-204ENST00000564056 FBLN2P98095 1184 aa25.24■■□□□ 1.63
IRF8-204ENST00000564056 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
IRF8-204ENST00000564056 EEA1Q15075 1411 aa25.2■■□□□ 1.62
IRF8-204ENST00000564056 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
IRF8-204ENST00000564056 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
IRF8-204ENST00000564056 IGF1RP08069 1367 aa25.16■■□□□ 1.62
IRF8-204ENST00000564056 CSRNP3Q8WYN3 585 aa25.14■■□□□ 1.62
IRF8-204ENST00000564056 CUL7Q14999 1698 aa25.13■■□□□ 1.61
IRF8-204ENST00000564056 ADAMTS12P58397 1594 aa25.12■■□□□ 1.61
IRF8-204ENST00000564056 FHAD1B1AJZ9 1412 aa25.11■■□□□ 1.61
IRF8-204ENST00000564056 CARMIL1Q5VZK9 1371 aa25.1■■□□□ 1.61
IRF8-204ENST00000564056 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
IRF8-204ENST00000564056 CHD1O14646 1710 aa25.08■■□□□ 1.61
IRF8-204ENST00000564056 EHMT2Q96KQ7 1210 aa25.06■■□□□ 1.6
IRF8-204ENST00000564056 RAPGEF2Q9Y4G8 1499 aa24.99■■□□□ 1.59
IRF8-204ENST00000564056 GRIN2AQ12879 1464 aa24.98■■□□□ 1.59
IRF8-204ENST00000564056 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
IRF8-204ENST00000564056 PRXQ9BXM0 1461 aa24.93■■□□□ 1.58
IRF8-204ENST00000564056 KIF21BO75037 1637 aa24.89■■□□□ 1.57
IRF8-204ENST00000564056 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
IRF8-204ENST00000564056 GOLGA3Q08378 1498 aa24.83■■□□□ 1.57
IRF8-204ENST00000564056 CEP170Q5SW79 1584 aa24.83■■□□□ 1.57
IRF8-204ENST00000564056 NUP160Q12769 1436 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms