RNA–Protein interactions for RNA: ENST00000564023.1

SGF29-202, Transcript of SAGA complex associated factor 29, humanhuman

TSL 5

Gene SGF29, Length 354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGF29-202ENST00000564023 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
SGF29-202ENST00000564023 ABCC9O60706 1549 aa20.56■□□□□ 0.88
SGF29-202ENST00000564023 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
SGF29-202ENST00000564023 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
SGF29-202ENST00000564023 DNAJC5Q9H3Z4 198 aa19.16■□□□□ 0.66
SGF29-202ENST00000564023 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
SGF29-202ENST00000564023 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
SGF29-202ENST00000564023 NACADO15069 1562 aa18.81■□□□□ 0.6
SGF29-202ENST00000564023 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
SGF29-202ENST00000564023 DCAF8L2P0C7V8 631 aa18.63■□□□□ 0.57
SGF29-202ENST00000564023 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
SGF29-202ENST00000564023 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
SGF29-202ENST00000564023 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
SGF29-202ENST00000564023 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
SGF29-202ENST00000564023 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
SGF29-202ENST00000564023 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
SGF29-202ENST00000564023 CUX2O14529 1486 aa18.12■□□□□ 0.49
SGF29-202ENST00000564023 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
SGF29-202ENST00000564023 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
SGF29-202ENST00000564023 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
SGF29-202ENST00000564023 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
SGF29-202ENST00000564023 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
SGF29-202ENST00000564023 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
SGF29-202ENST00000564023 NESP48681 1621 aa17.37■□□□□ 0.37
SGF29-202ENST00000564023 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
SGF29-202ENST00000564023 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
SGF29-202ENST00000564023 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
SGF29-202ENST00000564023 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
SGF29-202ENST00000564023 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
SGF29-202ENST00000564023 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
SGF29-202ENST00000564023 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
SGF29-202ENST00000564023 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
SGF29-202ENST00000564023 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
SGF29-202ENST00000564023 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
SGF29-202ENST00000564023 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
SGF29-202ENST00000564023 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
SGF29-202ENST00000564023 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
SGF29-202ENST00000564023 WDR62O43379 1518 aa16.95■□□□□ 0.3
SGF29-202ENST00000564023 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
SGF29-202ENST00000564023 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
SGF29-202ENST00000564023 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
SGF29-202ENST00000564023 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
SGF29-202ENST00000564023 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
SGF29-202ENST00000564023 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
SGF29-202ENST00000564023 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
SGF29-202ENST00000564023 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
SGF29-202ENST00000564023 CEP164Q9UPV0 1460 aa16.75■□□□□ 0.27
SGF29-202ENST00000564023 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
SGF29-202ENST00000564023 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
SGF29-202ENST00000564023 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
SGF29-202ENST00000564023 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
SGF29-202ENST00000564023 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
SGF29-202ENST00000564023 ILDR1Q86SU0 546 aaPredicted RBP16.52■□□□□ 0.24
SGF29-202ENST00000564023 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
SGF29-202ENST00000564023 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
SGF29-202ENST00000564023 CFTRP13569 1480 aa16.47■□□□□ 0.23
SGF29-202ENST00000564023 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
SGF29-202ENST00000564023 FBLN2P98095 1184 aa16.39■□□□□ 0.21
SGF29-202ENST00000564023 EIF4G3O43432 1585 aaKnown RBP16.29■□□□□ 0.2
SGF29-202ENST00000564023 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.197e-6■□□□□ 9.8
SGF29-202ENST00000564023 CHD1O14646 1710 aa16.25■□□□□ 0.19
SGF29-202ENST00000564023 WIZO95785 1651 aa16.21■□□□□ 0.19
SGF29-202ENST00000564023 TOPBP1Q92547 1522 aa16.21■□□□□ 0.19
SGF29-202ENST00000564023 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
SGF29-202ENST00000564023 CLASP1Q7Z460 1538 aa16.16■□□□□ 0.18
SGF29-202ENST00000564023 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
SGF29-202ENST00000564023 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
SGF29-202ENST00000564023 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
SGF29-202ENST00000564023 KDM4FA0A1W2PPD8 638 aa16.08■□□□□ 0.16
SGF29-202ENST00000564023 TARBP1Q13395 1621 aaKnown RBP16.07■□□□□ 0.16
SGF29-202ENST00000564023 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
SGF29-202ENST00000564023 SNAPC4Q5SXM2 1469 aa16.04■□□□□ 0.16
SGF29-202ENST00000564023 TDRD9Q8NDG6 1382 aaKnown RBP16.04■□□□□ 0.16
SGF29-202ENST00000564023 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
SGF29-202ENST00000564023 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
SGF29-202ENST00000564023 MAGI1Q96QZ7 1491 aaPredicted RBP15.98■□□□□ 0.15
SGF29-202ENST00000564023 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
SGF29-202ENST00000564023 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
SGF29-202ENST00000564023 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
SGF29-202ENST00000564023 SOGA1O94964 1423 aa15.94■□□□□ 0.14
SGF29-202ENST00000564023 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
SGF29-202ENST00000564023 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
SGF29-202ENST00000564023 CCDC88BA6NC98 1476 aa15.88■□□□□ 0.13
SGF29-202ENST00000564023 FAM69CQ0P6D2 419 aa15.87■□□□□ 0.13
SGF29-202ENST00000564023 FBXO41Q8TF61 875 aa15.85■□□□□ 0.13
SGF29-202ENST00000564023 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.12
SGF29-202ENST00000564023 ERCC6L2Q5T890 1561 aa15.82■□□□□ 0.12
SGF29-202ENST00000564023 KIF13AQ9H1H9 1805 aa15.8■□□□□ 0.12
SGF29-202ENST00000564023 ABCC10Q5T3U5 1492 aa15.8■□□□□ 0.12
SGF29-202ENST00000564023 KDM6BO15054 1643 aa15.76■□□□□ 0.11
SGF29-202ENST00000564023 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
SGF29-202ENST00000564023 NPM1P06748 294 aaKnown RBP eCLIP15.75■□□□□ 0.11
SGF29-202ENST00000564023 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
SGF29-202ENST00000564023 CEP170Q5SW79 1584 aa15.74■□□□□ 0.11
SGF29-202ENST00000564023 ADGRL1O94910 1474 aa15.71■□□□□ 0.1
SGF29-202ENST00000564023 LMTK3Q96Q04 1460 aa15.68■□□□□ 0.1
SGF29-202ENST00000564023 NUP160Q12769 1436 aa15.68■□□□□ 0.1
SGF29-202ENST00000564023 GRIN2AQ12879 1464 aa15.67■□□□□ 0.1
SGF29-202ENST00000564023 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
SGF29-202ENST00000564023 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms