RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 NISCHQ9Y2I1 1504 aa44.99■■■■■ 4.79
SPSB3-204ENST00000563741 CCDC180Q9P1Z9 1646 aa40.07■■■■■ 4.01
SPSB3-204ENST00000563741 ABCC9O60706 1549 aa39.25■■■■□ 3.87
SPSB3-204ENST00000563741 RB1CC1Q8TDY2 1594 aa37.75■■■■□ 3.63
SPSB3-204ENST00000563741 NACADO15069 1562 aa37.69■■■■□ 3.62
SPSB3-204ENST00000563741 DCAF8L2P0C7V8 631 aa37.64■■■■□ 3.62
SPSB3-204ENST00000563741 ZCCHC6Q5VYS8 1495 aaKnown RBP37.63■■■■□ 3.61
SPSB3-204ENST00000563741 MYO15BQ96JP2 1530 aa37.43■■■■□ 3.58
SPSB3-204ENST00000563741 DCAF1Q9Y4B6 1507 aa37.23■■■■□ 3.55
SPSB3-204ENST00000563741 UNC13AQ9UPW8 1703 aa36.91■■■■□ 3.5
SPSB3-204ENST00000563741 PABPN1Q86U42 306 aaKnown RBP eCLIP36.66■■■■□ 3.46
SPSB3-204ENST00000563741 BICRAQ9NZM4 1560 aa36.59■■■■□ 3.45
SPSB3-204ENST00000563741 SCRIBQ14160 1630 aa36.52■■■■□ 3.44
SPSB3-204ENST00000563741 SHROOM4Q9ULL8 1493 aa36.22■■■■□ 3.39
SPSB3-204ENST00000563741 DNAJC5BQ9UF47 199 aa36.1■■■■□ 3.37
SPSB3-204ENST00000563741 EIF4G1Q04637 1599 aaKnown RBP35.63■■■■□ 3.29
SPSB3-204ENST00000563741 CC2D2AQ9P2K1 1620 aa35.52■■■■□ 3.28
SPSB3-204ENST00000563741 CECR2Q9BXF3 1484 aa35.29■■■■□ 3.24
SPSB3-204ENST00000563741 SMARCA4P51532 1647 aa34.94■■■■□ 3.18
SPSB3-204ENST00000563741 BAZ1AQ9NRL2 1556 aaPredicted RBP34.88■■■■□ 3.17
SPSB3-204ENST00000563741 NCAPD3P42695 1498 aa34.76■■■■□ 3.16
SPSB3-204ENST00000563741 ATAD2BQ9ULI0 1458 aa34.76■■■■□ 3.15
SPSB3-204ENST00000563741 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
SPSB3-204ENST00000563741 MROH2BQ7Z745 1585 aa34.67■■■■□ 3.14
SPSB3-204ENST00000563741 RSF1Q96T23 1441 aaPredicted RBP34.63■■■■□ 3.13
SPSB3-204ENST00000563741 PEG3Q9GZU2 1588 aa34.59■■■■□ 3.13
SPSB3-204ENST00000563741 HMGXB3Q12766 1538 aa34.59■■■■□ 3.13
SPSB3-204ENST00000563741 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
SPSB3-204ENST00000563741 BAZ1BQ9UIG0 1483 aaKnown RBP34.48■■■■□ 3.11
SPSB3-204ENST00000563741 WIZO95785 1651 aa34.3■■■■□ 3.08
SPSB3-204ENST00000563741 TOP2AP11388 1531 aaKnown RBP33.98■■■■□ 3.03
SPSB3-204ENST00000563741 NESP48681 1621 aa33.94■■■■□ 3.02
SPSB3-204ENST00000563741 LAMC3Q9Y6N6 1575 aa33.87■■■■□ 3.01
SPSB3-204ENST00000563741 ERCC6Q03468 1493 aa33.86■■■■□ 3.01
SPSB3-204ENST00000563741 CADPSQ9ULU8 1353 aa33.75■■■□□ 2.99
SPSB3-204ENST00000563741 PDS5BQ9NTI5 1447 aa33.65■■■□□ 2.98
SPSB3-204ENST00000563741 CCDC88BA6NC98 1476 aa33.59■■■□□ 2.97
SPSB3-204ENST00000563741 KIF21AQ7Z4S6 1674 aa33.56■■■□□ 2.96
SPSB3-204ENST00000563741 CUX2O14529 1486 aa33.54■■■□□ 2.96
SPSB3-204ENST00000563741 CFTRP13569 1480 aa33.52■■■□□ 2.96
SPSB3-204ENST00000563741 THOC2Q8NI27 1593 aaKnown RBP33.45■■■□□ 2.95
SPSB3-204ENST00000563741 FANCD2Q9BXW9 1451 aa33.35■■■□□ 2.93
SPSB3-204ENST00000563741 CEP164Q9UPV0 1460 aa33.33■■■□□ 2.93
SPSB3-204ENST00000563741 PRDM2Q13029 1718 aa33.31■■■□□ 2.92
SPSB3-204ENST00000563741 MRC2Q9UBG0 1479 aa33.3■■■□□ 2.92
SPSB3-204ENST00000563741 WDR62O43379 1518 aa33.18■■■□□ 2.9
SPSB3-204ENST00000563741 URB2Q14146 1524 aaKnown RBP33.02■■■□□ 2.88
SPSB3-204ENST00000563741 CHIC1Q5VXU3 224 aa32.91■■■□□ 2.86
SPSB3-204ENST00000563741 ABCC8Q09428 1581 aa32.84■■■□□ 2.85
SPSB3-204ENST00000563741 TOPBP1Q92547 1522 aa32.81■■■□□ 2.84
SPSB3-204ENST00000563741 DNMBPQ6XZF7 1577 aa32.78■■■□□ 2.84
SPSB3-204ENST00000563741 IFT140Q96RY7 1462 aa32.64■■■□□ 2.81
SPSB3-204ENST00000563741 DNAJC5Q9H3Z4 198 aa32.61■■■□□ 2.81
SPSB3-204ENST00000563741 WRNQ14191 1432 aaPredicted RBP eCLIP32.6■■■□□ 2.81
SPSB3-204ENST00000563741 TRIM41Q8WV44 630 aa32.57■■■□□ 2.8
SPSB3-204ENST00000563741 CUX1P39880 1505 aa32.54■■■□□ 2.8
SPSB3-204ENST00000563741 POLA1P09884 1462 aaPredicted RBP32.51■■■□□ 2.8
SPSB3-204ENST00000563741 SYNJ1O43426 1573 aa32.49■■■□□ 2.79
SPSB3-204ENST00000563741 ZNF608Q9ULD9 1512 aaPredicted RBP32.47■■■□□ 2.79
SPSB3-204ENST00000563741 TARBP1Q13395 1621 aaKnown RBP32.46■■■□□ 2.79
SPSB3-204ENST00000563741 FGD5Q6ZNL6 1462 aa32.44■■■□□ 2.78
SPSB3-204ENST00000563741 SOGA1O94964 1423 aa32.41■■■□□ 2.78
SPSB3-204ENST00000563741 TOP2BQ02880 1626 aa32.39■■■□□ 2.78
SPSB3-204ENST00000563741 RAD54L2Q9Y4B4 1467 aa32.38■■■□□ 2.77
SPSB3-204ENST00000563741 BIVM-ERCC5R4GMW8 1640 aa32.36■■■□□ 2.77
SPSB3-204ENST00000563741 EIF4G3O43432 1585 aaKnown RBP32.35■■■□□ 2.77
SPSB3-204ENST00000563741 AQRO60306 1485 aaKnown RBP eCLIP32.29■■■□□ 2.762e-8■■■■■ 44.6
SPSB3-204ENST00000563741 WDR97A6NE52 1622 aa32.22■■■□□ 2.75
SPSB3-204ENST00000563741 TDRD9Q8NDG6 1382 aaKnown RBP32.22■■■□□ 2.75
SPSB3-204ENST00000563741 OSCARQ8IYS5 282 aa32.14■■■□□ 2.74
SPSB3-204ENST00000563741 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
SPSB3-204ENST00000563741 GRIN2BQ13224 1484 aa32.03■■■□□ 2.72
SPSB3-204ENST00000563741 GAPVD1Q14C86 1478 aa32.03■■■□□ 2.72
SPSB3-204ENST00000563741 ABCA5Q8WWZ7 1642 aa32■■■□□ 2.71
SPSB3-204ENST00000563741 CHD1O14646 1710 aa31.99■■■□□ 2.71
SPSB3-204ENST00000563741 SNAPC4Q5SXM2 1469 aa31.99■■■□□ 2.71
SPSB3-204ENST00000563741 PBRM1Q86U86 1689 aa31.98■■■□□ 2.71
SPSB3-204ENST00000563741 MAGI1Q96QZ7 1491 aaPredicted RBP31.96■■■□□ 2.71
SPSB3-204ENST00000563741 FBLN2P98095 1184 aa31.94■■■□□ 2.7
SPSB3-204ENST00000563741 FAM9AQ8IZU1 332 aaPredicted RBP31.93■■■□□ 2.7
SPSB3-204ENST00000563741 RUSC2Q8N2Y8 1516 aa31.92■■■□□ 2.7
SPSB3-204ENST00000563741 EEA1Q15075 1411 aa31.9■■■□□ 2.7
SPSB3-204ENST00000563741 CHMP7Q8WUX9 453 aaPredicted RBP31.84■■■□□ 2.69
SPSB3-204ENST00000563741 SYNJ2O15056 1496 aa31.84■■■□□ 2.69
SPSB3-204ENST00000563741 KIF27Q86VH2 1401 aa31.8■■■□□ 2.68
SPSB3-204ENST00000563741 ERICH3Q5RHP9 1530 aa31.74■■■□□ 2.67
SPSB3-204ENST00000563741 CSRNP3Q8WYN3 585 aa31.71■■■□□ 2.67
SPSB3-204ENST00000563741 ADAMTS12P58397 1594 aa31.7■■■□□ 2.67
SPSB3-204ENST00000563741 FHAD1B1AJZ9 1412 aa31.66■■■□□ 2.66
SPSB3-204ENST00000563741 RIMBP3CA6NJZ7 1639 aa31.62■■■□□ 2.65
SPSB3-204ENST00000563741 RIMBP3BA6NNM3 1639 aa31.62■■■□□ 2.65
SPSB3-204ENST00000563741 RIMBP3Q9UFD9 1639 aa31.62■■■□□ 2.65
SPSB3-204ENST00000563741 CLASP1Q7Z460 1538 aa31.61■■■□□ 2.65
SPSB3-204ENST00000563741 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
SPSB3-204ENST00000563741 ARHGEF11O15085 1522 aa31.6■■■□□ 2.65
SPSB3-204ENST00000563741 LOC105371045A0A1W2PR82 267 aa31.59■■■□□ 2.65
SPSB3-204ENST00000563741 IGF1RP08069 1367 aa31.56■■■□□ 2.64
SPSB3-204ENST00000563741 KIF21BO75037 1637 aa31.51■■■□□ 2.64
SPSB3-204ENST00000563741 PRXQ9BXM0 1461 aa31.51■■■□□ 2.63
SPSB3-204ENST00000563741 NUP160Q12769 1436 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms