RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
HERC2-203ENST00000563670 CHIC1Q5VXU3 224 aa20.17■□□□□ 0.82
HERC2-203ENST00000563670 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
HERC2-203ENST00000563670 ABCC9O60706 1549 aa20.02■□□□□ 0.79
HERC2-203ENST00000563670 DNAJC5BQ9UF47 199 aa19.82■□□□□ 0.76
HERC2-203ENST00000563670 DNAJC5Q9H3Z4 198 aa19.09■□□□□ 0.65
HERC2-203ENST00000563670 CCDC180Q9P1Z9 1646 aa18.99■□□□□ 0.63
HERC2-203ENST00000563670 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
HERC2-203ENST00000563670 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
HERC2-203ENST00000563670 NACADO15069 1562 aa18.24■□□□□ 0.51
HERC2-203ENST00000563670 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
HERC2-203ENST00000563670 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
HERC2-203ENST00000563670 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
HERC2-203ENST00000563670 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
HERC2-203ENST00000563670 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
HERC2-203ENST00000563670 CUX2O14529 1486 aa17.82■□□□□ 0.44
HERC2-203ENST00000563670 EIF4G1Q04637 1599 aaKnown RBP17.76■□□□□ 0.43
HERC2-203ENST00000563670 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
HERC2-203ENST00000563670 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
HERC2-203ENST00000563670 DCAF8L2P0C7V8 631 aa17.69■□□□□ 0.42
HERC2-203ENST00000563670 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
HERC2-203ENST00000563670 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
HERC2-203ENST00000563670 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
HERC2-203ENST00000563670 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
HERC2-203ENST00000563670 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
HERC2-203ENST00000563670 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
HERC2-203ENST00000563670 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
HERC2-203ENST00000563670 NESP48681 1621 aa16.87■□□□□ 0.29
HERC2-203ENST00000563670 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
HERC2-203ENST00000563670 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
HERC2-203ENST00000563670 BAZ1AQ9NRL2 1556 aaPredicted RBP16.73■□□□□ 0.27
HERC2-203ENST00000563670 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
HERC2-203ENST00000563670 RIMBP3CA6NJZ7 1639 aa16.65■□□□□ 0.26
HERC2-203ENST00000563670 RIMBP3BA6NNM3 1639 aa16.65■□□□□ 0.26
HERC2-203ENST00000563670 RIMBP3Q9UFD9 1639 aa16.65■□□□□ 0.26
HERC2-203ENST00000563670 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
HERC2-203ENST00000563670 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
HERC2-203ENST00000563670 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
HERC2-203ENST00000563670 ATAD2BQ9ULI0 1458 aa16.62■□□□□ 0.25
HERC2-203ENST00000563670 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
HERC2-203ENST00000563670 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
HERC2-203ENST00000563670 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
HERC2-203ENST00000563670 WDR62O43379 1518 aa16.52■□□□□ 0.24
HERC2-203ENST00000563670 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
HERC2-203ENST00000563670 MRC2Q9UBG0 1479 aa16.5■□□□□ 0.23
HERC2-203ENST00000563670 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
HERC2-203ENST00000563670 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
HERC2-203ENST00000563670 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
HERC2-203ENST00000563670 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
HERC2-203ENST00000563670 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
HERC2-203ENST00000563670 ARAP1Q96P48 1450 aa16.27■□□□□ 0.19
HERC2-203ENST00000563670 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.19
HERC2-203ENST00000563670 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
HERC2-203ENST00000563670 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
HERC2-203ENST00000563670 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
HERC2-203ENST00000563670 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
HERC2-203ENST00000563670 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
HERC2-203ENST00000563670 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
HERC2-203ENST00000563670 CFTRP13569 1480 aa15.87■□□□□ 0.13
HERC2-203ENST00000563670 CHD1O14646 1710 aa15.86■□□□□ 0.13
HERC2-203ENST00000563670 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.13
HERC2-203ENST00000563670 MROH2BQ7Z745 1585 aa15.82■□□□□ 0.12
HERC2-203ENST00000563670 KDM4FA0A1W2PPD8 638 aa15.8■□□□□ 0.12
HERC2-203ENST00000563670 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
HERC2-203ENST00000563670 FOXD1Q16676 465 aa15.74■□□□□ 0.11
HERC2-203ENST00000563670 FBLN2P98095 1184 aa15.73■□□□□ 0.11
HERC2-203ENST00000563670 ERCC6L2Q5T890 1561 aa15.69■□□□□ 0.1
HERC2-203ENST00000563670 FBXO41Q8TF61 875 aa15.68■□□□□ 0.1
HERC2-203ENST00000563670 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.11e-6■■■■■ 28.5
HERC2-203ENST00000563670 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
HERC2-203ENST00000563670 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
HERC2-203ENST00000563670 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
HERC2-203ENST00000563670 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
HERC2-203ENST00000563670 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
HERC2-203ENST00000563670 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
HERC2-203ENST00000563670 HECW2Q9P2P5 1572 aa15.56■□□□□ 0.08
HERC2-203ENST00000563670 KIF13AQ9H1H9 1805 aa15.55■□□□□ 0.08
HERC2-203ENST00000563670 SOCS7O14512 581 aa15.54■□□□□ 0.08
HERC2-203ENST00000563670 WIZO95785 1651 aa15.52■□□□□ 0.08
HERC2-203ENST00000563670 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
HERC2-203ENST00000563670 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
HERC2-203ENST00000563670 ADRA2BP18089 450 aa15.49■□□□□ 0.07
HERC2-203ENST00000563670 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
HERC2-203ENST00000563670 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
HERC2-203ENST00000563670 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
HERC2-203ENST00000563670 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.06
HERC2-203ENST00000563670 KDM6BO15054 1643 aa15.44■□□□□ 0.06
HERC2-203ENST00000563670 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
HERC2-203ENST00000563670 WDR97A6NE52 1622 aa15.41■□□□□ 0.06
HERC2-203ENST00000563670 ADGRL1O94910 1474 aa15.4■□□□□ 0.06
HERC2-203ENST00000563670 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
HERC2-203ENST00000563670 ABCC10Q5T3U5 1492 aa15.4■□□□□ 0.06
HERC2-203ENST00000563670 TDRD9Q8NDG6 1382 aaKnown RBP15.39■□□□□ 0.05
HERC2-203ENST00000563670 ILDR2Q71H61 639 aa15.37■□□□□ 0.05
HERC2-203ENST00000563670 FAM69CQ0P6D2 419 aa15.36■□□□□ 0.05
HERC2-203ENST00000563670 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
HERC2-203ENST00000563670 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
HERC2-203ENST00000563670 TOP2AP11388 1531 aaKnown RBP15.32■□□□□ 0.04
HERC2-203ENST00000563670 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
HERC2-203ENST00000563670 SOGA1O94964 1423 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms