RNA–Protein interactions for RNA: ENST00000563499.1

EARS2-208, Transcript of glutamyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene EARS2, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EARS2-208ENST00000563499 NISCHQ9Y2I1 1504 aa42.33■■■■■ 4.37
EARS2-208ENST00000563499 CCDC180Q9P1Z9 1646 aa37.56■■■■□ 3.6
EARS2-208ENST00000563499 ABCC9O60706 1549 aa36.51■■■■□ 3.44
EARS2-208ENST00000563499 ZCCHC6Q5VYS8 1495 aaKnown RBP35.31■■■■□ 3.24
EARS2-208ENST00000563499 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
EARS2-208ENST00000563499 NACADO15069 1562 aa35.21■■■■□ 3.23
EARS2-208ENST00000563499 RB1CC1Q8TDY2 1594 aa35.2■■■■□ 3.23
EARS2-208ENST00000563499 MYO15BQ96JP2 1530 aa35.04■■■■□ 3.2
EARS2-208ENST00000563499 DCAF1Q9Y4B6 1507 aa35.01■■■■□ 3.19
EARS2-208ENST00000563499 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
EARS2-208ENST00000563499 SCRIBQ14160 1630 aa34.31■■■■□ 3.08
EARS2-208ENST00000563499 BICRAQ9NZM4 1560 aa34.21■■■■□ 3.07
EARS2-208ENST00000563499 PABPN1Q86U42 306 aaKnown RBP eCLIP34.14■■■■□ 3.06
EARS2-208ENST00000563499 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
EARS2-208ENST00000563499 DNAJC5BQ9UF47 199 aa33.33■■■□□ 2.93
EARS2-208ENST00000563499 EIF4G1Q04637 1599 aaKnown RBP33.24■■■□□ 2.91
EARS2-208ENST00000563499 CC2D2AQ9P2K1 1620 aa33.07■■■□□ 2.88
EARS2-208ENST00000563499 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
EARS2-208ENST00000563499 SMARCA4P51532 1647 aa32.84■■■□□ 2.85
EARS2-208ENST00000563499 BAZ1AQ9NRL2 1556 aaPredicted RBP32.77■■■□□ 2.84
EARS2-208ENST00000563499 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
EARS2-208ENST00000563499 ATAD2BQ9ULI0 1458 aa32.55■■■□□ 2.8
EARS2-208ENST00000563499 SMARCA2P51531 1590 aa32.5■■■□□ 2.79
EARS2-208ENST00000563499 PEG3Q9GZU2 1588 aa32.48■■■□□ 2.79
EARS2-208ENST00000563499 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
EARS2-208ENST00000563499 WIZO95785 1651 aa32.37■■■□□ 2.77
EARS2-208ENST00000563499 HMGXB3Q12766 1538 aa32.35■■■□□ 2.77
EARS2-208ENST00000563499 RSF1Q96T23 1441 aaPredicted RBP32.34■■■□□ 2.77
EARS2-208ENST00000563499 BAZ1BQ9UIG0 1483 aaKnown RBP32.28■■■□□ 2.76
EARS2-208ENST00000563499 TOP2AP11388 1531 aaKnown RBP31.96■■■□□ 2.71
EARS2-208ENST00000563499 NESP48681 1621 aa31.7■■■□□ 2.66
EARS2-208ENST00000563499 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
EARS2-208ENST00000563499 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
EARS2-208ENST00000563499 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
EARS2-208ENST00000563499 CADPSQ9ULU8 1353 aa31.53■■■□□ 2.64
EARS2-208ENST00000563499 CFTRP13569 1480 aa31.41■■■□□ 2.62
EARS2-208ENST00000563499 KIF21AQ7Z4S6 1674 aa31.39■■■□□ 2.62
EARS2-208ENST00000563499 ERCC6Q03468 1493 aa31.39■■■□□ 2.62
EARS2-208ENST00000563499 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
EARS2-208ENST00000563499 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
EARS2-208ENST00000563499 FANCD2Q9BXW9 1451 aa31.19■■■□□ 2.58
EARS2-208ENST00000563499 THOC2Q8NI27 1593 aaKnown RBP31.17■■■□□ 2.58
EARS2-208ENST00000563499 CEP164Q9UPV0 1460 aa31.12■■■□□ 2.57
EARS2-208ENST00000563499 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
EARS2-208ENST00000563499 CUX2O14529 1486 aa30.97■■■□□ 2.55
EARS2-208ENST00000563499 WDR62O43379 1518 aa30.95■■■□□ 2.55
EARS2-208ENST00000563499 URB2Q14146 1524 aaKnown RBP30.91■■■□□ 2.54
EARS2-208ENST00000563499 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
EARS2-208ENST00000563499 DNMBPQ6XZF7 1577 aa30.72■■■□□ 2.51
EARS2-208ENST00000563499 ABCC8Q09428 1581 aa30.68■■■□□ 2.5
EARS2-208ENST00000563499 CUX1P39880 1505 aa30.63■■■□□ 2.49
EARS2-208ENST00000563499 POLA1P09884 1462 aaPredicted RBP30.49■■■□□ 2.47
EARS2-208ENST00000563499 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.47
EARS2-208ENST00000563499 WRNQ14191 1432 aaPredicted RBP eCLIP30.45■■■□□ 2.46
EARS2-208ENST00000563499 SYNJ1O43426 1573 aa30.45■■■□□ 2.46
EARS2-208ENST00000563499 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
EARS2-208ENST00000563499 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
EARS2-208ENST00000563499 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
EARS2-208ENST00000563499 TOP2BQ02880 1626 aa30.41■■■□□ 2.46
EARS2-208ENST00000563499 RAD54L2Q9Y4B4 1467 aa30.38■■■□□ 2.45
EARS2-208ENST00000563499 ZNF608Q9ULD9 1512 aaPredicted RBP30.35■■■□□ 2.45
EARS2-208ENST00000563499 SOGA1O94964 1423 aa30.34■■■□□ 2.45
EARS2-208ENST00000563499 WDR97A6NE52 1622 aa30.28■■■□□ 2.44
EARS2-208ENST00000563499 EIF4G3O43432 1585 aaKnown RBP30.25■■■□□ 2.43
EARS2-208ENST00000563499 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.42
EARS2-208ENST00000563499 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
EARS2-208ENST00000563499 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
EARS2-208ENST00000563499 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
EARS2-208ENST00000563499 PBRM1Q86U86 1689 aa30.04■■■□□ 2.4
EARS2-208ENST00000563499 GAPVD1Q14C86 1478 aa30.01■■■□□ 2.4
EARS2-208ENST00000563499 GRIN2BQ13224 1484 aa29.95■■■□□ 2.39
EARS2-208ENST00000563499 SNAPC4Q5SXM2 1469 aa29.92■■■□□ 2.38
EARS2-208ENST00000563499 CHD1O14646 1710 aa29.9■■■□□ 2.38
EARS2-208ENST00000563499 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
EARS2-208ENST00000563499 MAGI1Q96QZ7 1491 aaPredicted RBP29.85■■■□□ 2.37
EARS2-208ENST00000563499 ERICH3Q5RHP9 1530 aa29.79■■■□□ 2.36
EARS2-208ENST00000563499 KIF27Q86VH2 1401 aa29.78■■■□□ 2.36
EARS2-208ENST00000563499 DNAJC5Q9H3Z4 198 aa29.76■■■□□ 2.35
EARS2-208ENST00000563499 ADAMTS12P58397 1594 aa29.75■■■□□ 2.35
EARS2-208ENST00000563499 FBLN2P98095 1184 aa29.73■■■□□ 2.35
EARS2-208ENST00000563499 SYNJ2O15056 1496 aa29.73■■■□□ 2.35
EARS2-208ENST00000563499 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
EARS2-208ENST00000563499 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
EARS2-208ENST00000563499 RUSC2Q8N2Y8 1516 aa29.7■■■□□ 2.34
EARS2-208ENST00000563499 CHMP7Q8WUX9 453 aaPredicted RBP29.67■■■□□ 2.34
EARS2-208ENST00000563499 IGF1RP08069 1367 aa29.65■■■□□ 2.34
EARS2-208ENST00000563499 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
EARS2-208ENST00000563499 CUL7Q14999 1698 aa29.6■■■□□ 2.33
EARS2-208ENST00000563499 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
EARS2-208ENST00000563499 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
EARS2-208ENST00000563499 CEP170Q5SW79 1584 aa29.49■■■□□ 2.31
EARS2-208ENST00000563499 CARMIL1Q5VZK9 1371 aa29.47■■■□□ 2.31
EARS2-208ENST00000563499 NUP160Q12769 1436 aa29.45■■■□□ 2.3
EARS2-208ENST00000563499 EEA1Q15075 1411 aa29.33■■■□□ 2.29
EARS2-208ENST00000563499 RAPGEF2Q9Y4G8 1499 aa29.33■■■□□ 2.29
EARS2-208ENST00000563499 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
EARS2-208ENST00000563499 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
EARS2-208ENST00000563499 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
EARS2-208ENST00000563499 PRXQ9BXM0 1461 aa29.3■■■□□ 2.28
EARS2-208ENST00000563499 CSRNP3Q8WYN3 585 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms