RNA–Protein interactions for RNA: ENST00000563465.1

NUP93-206, Transcript of nucleoporin 93, humanhuman

TSL 2

Gene NUP93, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-206ENST00000563465 NISCHQ9Y2I1 1504 aa23.39■■□□□ 1.34
NUP93-206ENST00000563465 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.86
NUP93-206ENST00000563465 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
NUP93-206ENST00000563465 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
NUP93-206ENST00000563465 ABCC9O60706 1549 aa19.3■□□□□ 0.68
NUP93-206ENST00000563465 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
NUP93-206ENST00000563465 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
NUP93-206ENST00000563465 NACADO15069 1562 aa19.09■□□□□ 0.65
NUP93-206ENST00000563465 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
NUP93-206ENST00000563465 SHROOM4Q9ULL8 1493 aa18.85■□□□□ 0.61
NUP93-206ENST00000563465 SCRIBQ14160 1630 aa18.68■□□□□ 0.58
NUP93-206ENST00000563465 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
NUP93-206ENST00000563465 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
NUP93-206ENST00000563465 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
NUP93-206ENST00000563465 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
NUP93-206ENST00000563465 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
NUP93-206ENST00000563465 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
NUP93-206ENST00000563465 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
NUP93-206ENST00000563465 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
NUP93-206ENST00000563465 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
NUP93-206ENST00000563465 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
NUP93-206ENST00000563465 WIZO95785 1651 aa17.81■□□□□ 0.44
NUP93-206ENST00000563465 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
NUP93-206ENST00000563465 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
NUP93-206ENST00000563465 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
NUP93-206ENST00000563465 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
NUP93-206ENST00000563465 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
NUP93-206ENST00000563465 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
NUP93-206ENST00000563465 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
NUP93-206ENST00000563465 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
NUP93-206ENST00000563465 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
NUP93-206ENST00000563465 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
NUP93-206ENST00000563465 CFTRP13569 1480 aa17.2■□□□□ 0.34
NUP93-206ENST00000563465 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
NUP93-206ENST00000563465 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
NUP93-206ENST00000563465 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
NUP93-206ENST00000563465 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
NUP93-206ENST00000563465 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
NUP93-206ENST00000563465 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
NUP93-206ENST00000563465 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
NUP93-206ENST00000563465 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
NUP93-206ENST00000563465 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
NUP93-206ENST00000563465 NESP48681 1621 aa16.92■□□□□ 0.3
NUP93-206ENST00000563465 TOP2BQ02880 1626 aa16.91■□□□□ 0.3
NUP93-206ENST00000563465 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
NUP93-206ENST00000563465 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
NUP93-206ENST00000563465 CUX1P39880 1505 aa16.86■□□□□ 0.29
NUP93-206ENST00000563465 EEA1Q15075 1411 aa16.84■□□□□ 0.29
NUP93-206ENST00000563465 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
NUP93-206ENST00000563465 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
NUP93-206ENST00000563465 SOGA1O94964 1423 aa16.75■□□□□ 0.27
NUP93-206ENST00000563465 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
NUP93-206ENST00000563465 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
NUP93-206ENST00000563465 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
NUP93-206ENST00000563465 FAM9AQ8IZU1 332 aaPredicted RBP16.7■□□□□ 0.26
NUP93-206ENST00000563465 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
NUP93-206ENST00000563465 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
NUP93-206ENST00000563465 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
NUP93-206ENST00000563465 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
NUP93-206ENST00000563465 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
NUP93-206ENST00000563465 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
NUP93-206ENST00000563465 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
NUP93-206ENST00000563465 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
NUP93-206ENST00000563465 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
NUP93-206ENST00000563465 WDR62O43379 1518 aa16.59■□□□□ 0.25
NUP93-206ENST00000563465 CUX2O14529 1486 aa16.57■□□□□ 0.24
NUP93-206ENST00000563465 KIF21BO75037 1637 aa16.56■□□□□ 0.24
NUP93-206ENST00000563465 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
NUP93-206ENST00000563465 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
NUP93-206ENST00000563465 PRXQ9BXM0 1461 aa16.52■□□□□ 0.23
NUP93-206ENST00000563465 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
NUP93-206ENST00000563465 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
NUP93-206ENST00000563465 IGF1RP08069 1367 aa16.49■□□□□ 0.23
NUP93-206ENST00000563465 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
NUP93-206ENST00000563465 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
NUP93-206ENST00000563465 TARBP1Q13395 1621 aaKnown RBP16.47■□□□□ 0.23
NUP93-206ENST00000563465 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
NUP93-206ENST00000563465 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
NUP93-206ENST00000563465 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
NUP93-206ENST00000563465 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
NUP93-206ENST00000563465 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
NUP93-206ENST00000563465 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
NUP93-206ENST00000563465 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
NUP93-206ENST00000563465 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
NUP93-206ENST00000563465 CUL7Q14999 1698 aa16.37■□□□□ 0.21
NUP93-206ENST00000563465 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
NUP93-206ENST00000563465 GRIN2BQ13224 1484 aa16.32■□□□□ 0.2
NUP93-206ENST00000563465 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.2
NUP93-206ENST00000563465 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
NUP93-206ENST00000563465 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
NUP93-206ENST00000563465 CLIP1P30622 1438 aa16.25■□□□□ 0.19
NUP93-206ENST00000563465 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
NUP93-206ENST00000563465 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
NUP93-206ENST00000563465 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
NUP93-206ENST00000563465 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
NUP93-206ENST00000563465 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
NUP93-206ENST00000563465 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
NUP93-206ENST00000563465 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
NUP93-206ENST00000563465 VPS8Q8N3P4 1428 aa16.11■□□□□ 0.17
NUP93-206ENST00000563465 ARHGAP35Q9NRY4 1499 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms