RNA–Protein interactions for RNA: ENST00000563462.1

KATNB1-205, Transcript of katanin regulatory subunit B1, humanhuman

TSL 5

Gene KATNB1, Length 827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-205ENST00000563462 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
KATNB1-205ENST00000563462 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
KATNB1-205ENST00000563462 ABCC9O60706 1549 aa25.86■■□□□ 1.73
KATNB1-205ENST00000563462 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
KATNB1-205ENST00000563462 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
KATNB1-205ENST00000563462 DCAF1Q9Y4B6 1507 aa25.32■■□□□ 1.64
KATNB1-205ENST00000563462 NACADO15069 1562 aa25.27■■□□□ 1.64
KATNB1-205ENST00000563462 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
KATNB1-205ENST00000563462 RB1CC1Q8TDY2 1594 aa25.17■■□□□ 1.62
KATNB1-205ENST00000563462 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
KATNB1-205ENST00000563462 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
KATNB1-205ENST00000563462 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
KATNB1-205ENST00000563462 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
KATNB1-205ENST00000563462 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
KATNB1-205ENST00000563462 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
KATNB1-205ENST00000563462 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
KATNB1-205ENST00000563462 CECR2Q9BXF3 1484 aa23.6■■□□□ 1.37
KATNB1-205ENST00000563462 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
KATNB1-205ENST00000563462 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
KATNB1-205ENST00000563462 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
KATNB1-205ENST00000563462 SMARCA2P51531 1590 aa23.37■■□□□ 1.33
KATNB1-205ENST00000563462 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
KATNB1-205ENST00000563462 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
KATNB1-205ENST00000563462 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
KATNB1-205ENST00000563462 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
KATNB1-205ENST00000563462 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
KATNB1-205ENST00000563462 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
KATNB1-205ENST00000563462 BAZ1BQ9UIG0 1483 aaKnown RBP23.16■■□□□ 1.3
KATNB1-205ENST00000563462 WIZO95785 1651 aa23.16■■□□□ 1.3
KATNB1-205ENST00000563462 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
KATNB1-205ENST00000563462 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
KATNB1-205ENST00000563462 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
KATNB1-205ENST00000563462 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
KATNB1-205ENST00000563462 LAMC3Q9Y6N6 1575 aa22.61■■□□□ 1.21
KATNB1-205ENST00000563462 CFTRP13569 1480 aa22.58■■□□□ 1.2
KATNB1-205ENST00000563462 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
KATNB1-205ENST00000563462 NESP48681 1621 aa22.46■■□□□ 1.19
KATNB1-205ENST00000563462 PRDM2Q13029 1718 aa22.39■■□□□ 1.17
KATNB1-205ENST00000563462 ERCC6Q03468 1493 aa22.33■■□□□ 1.16
KATNB1-205ENST00000563462 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
KATNB1-205ENST00000563462 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
KATNB1-205ENST00000563462 KIF21AQ7Z4S6 1674 aa22.22■■□□□ 1.15
KATNB1-205ENST00000563462 MRC2Q9UBG0 1479 aa22.16■■□□□ 1.14
KATNB1-205ENST00000563462 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
KATNB1-205ENST00000563462 THOC2Q8NI27 1593 aaKnown RBP22.1■■□□□ 1.13
KATNB1-205ENST00000563462 WDR62O43379 1518 aa22.08■■□□□ 1.13
KATNB1-205ENST00000563462 URB2Q14146 1524 aaKnown RBP22.04■■□□□ 1.12
KATNB1-205ENST00000563462 DNMBPQ6XZF7 1577 aa22.04■■□□□ 1.12
KATNB1-205ENST00000563462 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
KATNB1-205ENST00000563462 CUX2O14529 1486 aa22.02■■□□□ 1.12
KATNB1-205ENST00000563462 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
KATNB1-205ENST00000563462 CUX1P39880 1505 aa21.96■■□□□ 1.11
KATNB1-205ENST00000563462 TOP2BQ02880 1626 aa21.92■■□□□ 1.1
KATNB1-205ENST00000563462 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
KATNB1-205ENST00000563462 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
KATNB1-205ENST00000563462 POLA1P09884 1462 aaPredicted RBP21.84■■□□□ 1.09
KATNB1-205ENST00000563462 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.09
KATNB1-205ENST00000563462 IFT140Q96RY7 1462 aa21.83■■□□□ 1.08
KATNB1-205ENST00000563462 SOGA1O94964 1423 aa21.79■■□□□ 1.08
KATNB1-205ENST00000563462 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
KATNB1-205ENST00000563462 TARBP1Q13395 1621 aaKnown RBP21.72■■□□□ 1.07
KATNB1-205ENST00000563462 WDR97A6NE52 1622 aa21.71■■□□□ 1.07
KATNB1-205ENST00000563462 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
KATNB1-205ENST00000563462 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
KATNB1-205ENST00000563462 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
KATNB1-205ENST00000563462 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
KATNB1-205ENST00000563462 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
KATNB1-205ENST00000563462 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
KATNB1-205ENST00000563462 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
KATNB1-205ENST00000563462 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
KATNB1-205ENST00000563462 ABCA5Q8WWZ7 1642 aa21.54■■□□□ 1.04
KATNB1-205ENST00000563462 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.043e-6■■□□□ 13.8
KATNB1-205ENST00000563462 GRIN2BQ13224 1484 aa21.51■■□□□ 1.03
KATNB1-205ENST00000563462 EEA1Q15075 1411 aa21.48■■□□□ 1.03
KATNB1-205ENST00000563462 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
KATNB1-205ENST00000563462 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
KATNB1-205ENST00000563462 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
KATNB1-205ENST00000563462 IGF1RP08069 1367 aa21.38■■□□□ 1.01
KATNB1-205ENST00000563462 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
KATNB1-205ENST00000563462 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
KATNB1-205ENST00000563462 CUL7Q14999 1698 aa21.34■■□□□ 1.01
KATNB1-205ENST00000563462 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
KATNB1-205ENST00000563462 SYNJ2O15056 1496 aa21.32■■□□□ 1
KATNB1-205ENST00000563462 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
KATNB1-205ENST00000563462 ADAMTS12P58397 1594 aa21.3■■□□□ 1
KATNB1-205ENST00000563462 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
KATNB1-205ENST00000563462 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
KATNB1-205ENST00000563462 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
KATNB1-205ENST00000563462 RAPGEF2Q9Y4G8 1499 aa21.21■□□□□ 0.99
KATNB1-205ENST00000563462 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
KATNB1-205ENST00000563462 FBLN2P98095 1184 aa21.2■□□□□ 0.98
KATNB1-205ENST00000563462 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
KATNB1-205ENST00000563462 OSCARQ8IYS5 282 aa21.16■□□□□ 0.98
KATNB1-205ENST00000563462 CHD1O14646 1710 aa21.15■□□□□ 0.98
KATNB1-205ENST00000563462 KIF21BO75037 1637 aa21.13■□□□□ 0.97
KATNB1-205ENST00000563462 NUP160Q12769 1436 aa21.12■□□□□ 0.97
KATNB1-205ENST00000563462 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
KATNB1-205ENST00000563462 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
KATNB1-205ENST00000563462 KIAA0586Q9BVV6 1533 aa21.03■□□□□ 0.96
KATNB1-205ENST00000563462 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms