RNA–Protein interactions for RNA: ENST00000563186.5

CDIP1-204, Transcript of cell death inducing p53 target 1, humanhuman

TSL 5

Gene CDIP1, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-204ENST00000563186 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
CDIP1-204ENST00000563186 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
CDIP1-204ENST00000563186 ABCC9O60706 1549 aa29.05■■■□□ 2.24
CDIP1-204ENST00000563186 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
CDIP1-204ENST00000563186 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
CDIP1-204ENST00000563186 NACADO15069 1562 aa27.71■■■□□ 2.03
CDIP1-204ENST00000563186 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
CDIP1-204ENST00000563186 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
CDIP1-204ENST00000563186 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
CDIP1-204ENST00000563186 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.95
CDIP1-204ENST00000563186 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
CDIP1-204ENST00000563186 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
CDIP1-204ENST00000563186 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
CDIP1-204ENST00000563186 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
CDIP1-204ENST00000563186 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
CDIP1-204ENST00000563186 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
CDIP1-204ENST00000563186 CC2D2AQ9P2K1 1620 aa26.18■■□□□ 1.78
CDIP1-204ENST00000563186 CECR2Q9BXF3 1484 aa26.08■■□□□ 1.77
CDIP1-204ENST00000563186 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
CDIP1-204ENST00000563186 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
CDIP1-204ENST00000563186 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
CDIP1-204ENST00000563186 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
CDIP1-204ENST00000563186 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
CDIP1-204ENST00000563186 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
CDIP1-204ENST00000563186 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
CDIP1-204ENST00000563186 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
CDIP1-204ENST00000563186 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
CDIP1-204ENST00000563186 WIZO95785 1651 aa25.28■■□□□ 1.64
CDIP1-204ENST00000563186 RSF1Q96T23 1441 aaPredicted RBP25.26■■□□□ 1.63
CDIP1-204ENST00000563186 NESP48681 1621 aa25.09■■□□□ 1.61
CDIP1-204ENST00000563186 ERCC6Q03468 1493 aa25.05■■□□□ 1.6
CDIP1-204ENST00000563186 TOP2AP11388 1531 aaKnown RBP24.95■■□□□ 1.58
CDIP1-204ENST00000563186 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
CDIP1-204ENST00000563186 LAMC3Q9Y6N6 1575 aa24.91■■□□□ 1.58
CDIP1-204ENST00000563186 PDS5BQ9NTI5 1447 aa24.84■■□□□ 1.57
CDIP1-204ENST00000563186 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
CDIP1-204ENST00000563186 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
CDIP1-204ENST00000563186 CUX2O14529 1486 aa24.7■■□□□ 1.55
CDIP1-204ENST00000563186 CFTRP13569 1480 aa24.7■■□□□ 1.54
CDIP1-204ENST00000563186 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
CDIP1-204ENST00000563186 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
CDIP1-204ENST00000563186 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
CDIP1-204ENST00000563186 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.52
CDIP1-204ENST00000563186 MRC2Q9UBG0 1479 aa24.55■■□□□ 1.52
CDIP1-204ENST00000563186 WDR62O43379 1518 aa24.41■■□□□ 1.5
CDIP1-204ENST00000563186 PRDM2Q13029 1718 aa24.36■■□□□ 1.49
CDIP1-204ENST00000563186 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
CDIP1-204ENST00000563186 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
CDIP1-204ENST00000563186 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
CDIP1-204ENST00000563186 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
CDIP1-204ENST00000563186 DNMBPQ6XZF7 1577 aa24.11■■□□□ 1.45
CDIP1-204ENST00000563186 IFT140Q96RY7 1462 aa24.06■■□□□ 1.44
CDIP1-204ENST00000563186 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
CDIP1-204ENST00000563186 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
CDIP1-204ENST00000563186 CUX1P39880 1505 aa23.97■■□□□ 1.43
CDIP1-204ENST00000563186 SOGA1O94964 1423 aa23.96■■□□□ 1.43
CDIP1-204ENST00000563186 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
CDIP1-204ENST00000563186 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
CDIP1-204ENST00000563186 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.42
CDIP1-204ENST00000563186 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
CDIP1-204ENST00000563186 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
CDIP1-204ENST00000563186 OSCARQ8IYS5 282 aa23.85■■□□□ 1.41
CDIP1-204ENST00000563186 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.4
CDIP1-204ENST00000563186 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
CDIP1-204ENST00000563186 FBLN2P98095 1184 aa23.78■■□□□ 1.4
CDIP1-204ENST00000563186 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
CDIP1-204ENST00000563186 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
CDIP1-204ENST00000563186 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
CDIP1-204ENST00000563186 GAPVD1Q14C86 1478 aa23.64■■□□□ 1.38
CDIP1-204ENST00000563186 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
CDIP1-204ENST00000563186 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
CDIP1-204ENST00000563186 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
CDIP1-204ENST00000563186 SNAPC4Q5SXM2 1469 aa23.62■■□□□ 1.37
CDIP1-204ENST00000563186 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
CDIP1-204ENST00000563186 CHD1O14646 1710 aa23.53■■□□□ 1.36
CDIP1-204ENST00000563186 MAGI1Q96QZ7 1491 aaPredicted RBP23.53■■□□□ 1.36
CDIP1-204ENST00000563186 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
CDIP1-204ENST00000563186 PBRM1Q86U86 1689 aa23.49■■□□□ 1.35
CDIP1-204ENST00000563186 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
CDIP1-204ENST00000563186 SYNJ2O15056 1496 aa23.47■■□□□ 1.35
CDIP1-204ENST00000563186 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
CDIP1-204ENST00000563186 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
CDIP1-204ENST00000563186 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
CDIP1-204ENST00000563186 ARHGEF11O15085 1522 aa23.32■■□□□ 1.32
CDIP1-204ENST00000563186 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
CDIP1-204ENST00000563186 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
CDIP1-204ENST00000563186 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
CDIP1-204ENST00000563186 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
CDIP1-204ENST00000563186 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
CDIP1-204ENST00000563186 CYB5RLQ6IPT4 315 aa23.3■■□□□ 1.32
CDIP1-204ENST00000563186 IGF1RP08069 1367 aa23.29■■□□□ 1.32
CDIP1-204ENST00000563186 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
CDIP1-204ENST00000563186 NUP160Q12769 1436 aa23.17■■□□□ 1.3
CDIP1-204ENST00000563186 CEP170Q5SW79 1584 aa23.17■■□□□ 1.3
CDIP1-204ENST00000563186 CARMIL1Q5VZK9 1371 aa23.16■■□□□ 1.3
CDIP1-204ENST00000563186 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
CDIP1-204ENST00000563186 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
CDIP1-204ENST00000563186 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
CDIP1-204ENST00000563186 CUL7Q14999 1698 aa23.09■■□□□ 1.29
CDIP1-204ENST00000563186 PRG4Q92954 1404 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms