RNA–Protein interactions for RNA: ENST00000562881.1

FAN1-204, Transcript of FANCD2 and FANCI associated nuclease 1, humanhuman

TSL 3

Gene FAN1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAN1-204ENST00000562881 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
FAN1-204ENST00000562881 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
FAN1-204ENST00000562881 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
FAN1-204ENST00000562881 ABCC9O60706 1549 aa23.74■■□□□ 1.39
FAN1-204ENST00000562881 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
FAN1-204ENST00000562881 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
FAN1-204ENST00000562881 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
FAN1-204ENST00000562881 NACADO15069 1562 aa23.18■■□□□ 1.3
FAN1-204ENST00000562881 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
FAN1-204ENST00000562881 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
FAN1-204ENST00000562881 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
FAN1-204ENST00000562881 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
FAN1-204ENST00000562881 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
FAN1-204ENST00000562881 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
FAN1-204ENST00000562881 BICRAQ9NZM4 1560 aa22.1■■□□□ 1.13
FAN1-204ENST00000562881 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
FAN1-204ENST00000562881 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
FAN1-204ENST00000562881 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
FAN1-204ENST00000562881 PABPN1Q86U42 306 aaKnown RBP eCLIP22.04■■□□□ 1.12
FAN1-204ENST00000562881 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
FAN1-204ENST00000562881 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
FAN1-204ENST00000562881 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
FAN1-204ENST00000562881 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
FAN1-204ENST00000562881 WIZO95785 1651 aa21.74■■□□□ 1.07
FAN1-204ENST00000562881 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
FAN1-204ENST00000562881 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.05
FAN1-204ENST00000562881 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
FAN1-204ENST00000562881 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
FAN1-204ENST00000562881 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
FAN1-204ENST00000562881 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
FAN1-204ENST00000562881 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
FAN1-204ENST00000562881 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
FAN1-204ENST00000562881 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
FAN1-204ENST00000562881 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
FAN1-204ENST00000562881 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
FAN1-204ENST00000562881 CFTRP13569 1480 aa20.87■□□□□ 0.93
FAN1-204ENST00000562881 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
FAN1-204ENST00000562881 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
FAN1-204ENST00000562881 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
FAN1-204ENST00000562881 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
FAN1-204ENST00000562881 DNAJC5Q9H3Z4 198 aa20.77■□□□□ 0.92
FAN1-204ENST00000562881 EEA1Q15075 1411 aa20.72■□□□□ 0.91
FAN1-204ENST00000562881 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
FAN1-204ENST00000562881 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
FAN1-204ENST00000562881 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
FAN1-204ENST00000562881 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
FAN1-204ENST00000562881 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
FAN1-204ENST00000562881 CUX2O14529 1486 aa20.56■□□□□ 0.88
FAN1-204ENST00000562881 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
FAN1-204ENST00000562881 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
FAN1-204ENST00000562881 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
FAN1-204ENST00000562881 CUX1P39880 1505 aa20.53■□□□□ 0.88
FAN1-204ENST00000562881 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
FAN1-204ENST00000562881 SOGA1O94964 1423 aa20.48■□□□□ 0.87
FAN1-204ENST00000562881 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
FAN1-204ENST00000562881 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
FAN1-204ENST00000562881 NESP48681 1621 aa20.42■□□□□ 0.86
FAN1-204ENST00000562881 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
FAN1-204ENST00000562881 KIF21BO75037 1637 aa20.35■□□□□ 0.85
FAN1-204ENST00000562881 RUSC2Q8N2Y8 1516 aa20.35■□□□□ 0.85
FAN1-204ENST00000562881 KIF27Q86VH2 1401 aa20.35■□□□□ 0.85
FAN1-204ENST00000562881 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
FAN1-204ENST00000562881 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
FAN1-204ENST00000562881 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
FAN1-204ENST00000562881 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
FAN1-204ENST00000562881 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
FAN1-204ENST00000562881 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
FAN1-204ENST00000562881 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
FAN1-204ENST00000562881 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
FAN1-204ENST00000562881 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
FAN1-204ENST00000562881 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
FAN1-204ENST00000562881 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
FAN1-204ENST00000562881 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
FAN1-204ENST00000562881 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
FAN1-204ENST00000562881 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
FAN1-204ENST00000562881 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
FAN1-204ENST00000562881 RAPGEF2Q9Y4G8 1499 aa20.1■□□□□ 0.81
FAN1-204ENST00000562881 IGF1RP08069 1367 aa20.08■□□□□ 0.81
FAN1-204ENST00000562881 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
FAN1-204ENST00000562881 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
FAN1-204ENST00000562881 WDR62O43379 1518 aa20.05■□□□□ 0.8
FAN1-204ENST00000562881 CUL7Q14999 1698 aa20.03■□□□□ 0.8
FAN1-204ENST00000562881 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
FAN1-204ENST00000562881 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
FAN1-204ENST00000562881 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
FAN1-204ENST00000562881 CLIP1P30622 1438 aa19.98■□□□□ 0.79
FAN1-204ENST00000562881 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
FAN1-204ENST00000562881 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
FAN1-204ENST00000562881 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
FAN1-204ENST00000562881 TRIM26Q12899 539 aaPredicted RBP19.87■□□□□ 0.77
FAN1-204ENST00000562881 VPS8Q8N3P4 1428 aa19.84■□□□□ 0.77
FAN1-204ENST00000562881 GRIN2BQ13224 1484 aa19.83■□□□□ 0.76
FAN1-204ENST00000562881 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
FAN1-204ENST00000562881 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
FAN1-204ENST00000562881 CTTNBP2Q8WZ74 1663 aa19.75■□□□□ 0.75
FAN1-204ENST00000562881 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.759e-7■■■■□ 23.2
FAN1-204ENST00000562881 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
FAN1-204ENST00000562881 APLP2Q06481 763 aa19.73■□□□□ 0.75
FAN1-204ENST00000562881 ADAMTS12P58397 1594 aa19.73■□□□□ 0.75
FAN1-204ENST00000562881 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms