RNA–Protein interactions for RNA: ENST00000562826.5

ITGA11-203, Transcript of integrin subunit alpha 11, humanhuman

TSL 3

Gene ITGA11, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA11-203ENST00000562826 NISCHQ9Y2I1 1504 aa25.18■■□□□ 1.62
ITGA11-203ENST00000562826 CCDC180Q9P1Z9 1646 aa22.27■■□□□ 1.16
ITGA11-203ENST00000562826 ABCC9O60706 1549 aa21.93■■□□□ 1.1
ITGA11-203ENST00000562826 DCAF8L2P0C7V8 631 aa21.22■□□□□ 0.99
ITGA11-203ENST00000562826 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
ITGA11-203ENST00000562826 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
ITGA11-203ENST00000562826 NACADO15069 1562 aa20.96■□□□□ 0.95
ITGA11-203ENST00000562826 MYO15BQ96JP2 1530 aa20.79■□□□□ 0.92
ITGA11-203ENST00000562826 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
ITGA11-203ENST00000562826 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
ITGA11-203ENST00000562826 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
ITGA11-203ENST00000562826 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
ITGA11-203ENST00000562826 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
ITGA11-203ENST00000562826 SHROOM4Q9ULL8 1493 aa20.14■□□□□ 0.81
ITGA11-203ENST00000562826 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
ITGA11-203ENST00000562826 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
ITGA11-203ENST00000562826 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
ITGA11-203ENST00000562826 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
ITGA11-203ENST00000562826 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
ITGA11-203ENST00000562826 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
ITGA11-203ENST00000562826 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
ITGA11-203ENST00000562826 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
ITGA11-203ENST00000562826 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
ITGA11-203ENST00000562826 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
ITGA11-203ENST00000562826 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
ITGA11-203ENST00000562826 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.67
ITGA11-203ENST00000562826 RSF1Q96T23 1441 aaPredicted RBP19.26■□□□□ 0.67
ITGA11-203ENST00000562826 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
ITGA11-203ENST00000562826 WIZO95785 1651 aa19.24■□□□□ 0.67
ITGA11-203ENST00000562826 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
ITGA11-203ENST00000562826 NESP48681 1621 aa19■□□□□ 0.63
ITGA11-203ENST00000562826 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
ITGA11-203ENST00000562826 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
ITGA11-203ENST00000562826 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
ITGA11-203ENST00000562826 LAMC3Q9Y6N6 1575 aa18.83■□□□□ 0.6
ITGA11-203ENST00000562826 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
ITGA11-203ENST00000562826 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
ITGA11-203ENST00000562826 CFTRP13569 1480 aa18.72■□□□□ 0.59
ITGA11-203ENST00000562826 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
ITGA11-203ENST00000562826 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
ITGA11-203ENST00000562826 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
ITGA11-203ENST00000562826 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
ITGA11-203ENST00000562826 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
ITGA11-203ENST00000562826 CUX2O14529 1486 aa18.56■□□□□ 0.56
ITGA11-203ENST00000562826 PRDM2Q13029 1718 aa18.47■□□□□ 0.55
ITGA11-203ENST00000562826 WDR62O43379 1518 aa18.47■□□□□ 0.55
ITGA11-203ENST00000562826 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
ITGA11-203ENST00000562826 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
ITGA11-203ENST00000562826 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
ITGA11-203ENST00000562826 ABCC8Q09428 1581 aa18.26■□□□□ 0.51
ITGA11-203ENST00000562826 CUX1P39880 1505 aa18.25■□□□□ 0.51
ITGA11-203ENST00000562826 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
ITGA11-203ENST00000562826 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
ITGA11-203ENST00000562826 FGD5Q6ZNL6 1462 aa18.19■□□□□ 0.5
ITGA11-203ENST00000562826 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
ITGA11-203ENST00000562826 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
ITGA11-203ENST00000562826 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
ITGA11-203ENST00000562826 SOGA1O94964 1423 aa18.15■□□□□ 0.5
ITGA11-203ENST00000562826 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
ITGA11-203ENST00000562826 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
ITGA11-203ENST00000562826 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
ITGA11-203ENST00000562826 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
ITGA11-203ENST00000562826 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
ITGA11-203ENST00000562826 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
ITGA11-203ENST00000562826 BIVM-ERCC5R4GMW8 1640 aa18.02■□□□□ 0.48
ITGA11-203ENST00000562826 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
ITGA11-203ENST00000562826 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
ITGA11-203ENST00000562826 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
ITGA11-203ENST00000562826 FBLN2P98095 1184 aa17.93■□□□□ 0.46
ITGA11-203ENST00000562826 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
ITGA11-203ENST00000562826 SNAPC4Q5SXM2 1469 aa17.91■□□□□ 0.46
ITGA11-203ENST00000562826 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
ITGA11-203ENST00000562826 ABCA5Q8WWZ7 1642 aa17.87■□□□□ 0.45
ITGA11-203ENST00000562826 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
ITGA11-203ENST00000562826 TRIM41Q8WV44 630 aa17.83■□□□□ 0.44
ITGA11-203ENST00000562826 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
ITGA11-203ENST00000562826 PBRM1Q86U86 1689 aa17.82■□□□□ 0.44
ITGA11-203ENST00000562826 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
ITGA11-203ENST00000562826 CHD1O14646 1710 aa17.79■□□□□ 0.44
ITGA11-203ENST00000562826 SYNJ2O15056 1496 aa17.76■□□□□ 0.43
ITGA11-203ENST00000562826 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
ITGA11-203ENST00000562826 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
ITGA11-203ENST00000562826 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
ITGA11-203ENST00000562826 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
ITGA11-203ENST00000562826 IGF1RP08069 1367 aa17.69■□□□□ 0.42
ITGA11-203ENST00000562826 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
ITGA11-203ENST00000562826 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
ITGA11-203ENST00000562826 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
ITGA11-203ENST00000562826 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
ITGA11-203ENST00000562826 CLASP1Q7Z460 1538 aa17.6■□□□□ 0.41
ITGA11-203ENST00000562826 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
ITGA11-203ENST00000562826 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
ITGA11-203ENST00000562826 NUP160Q12769 1436 aa17.57■□□□□ 0.4
ITGA11-203ENST00000562826 FAM9AQ8IZU1 332 aaPredicted RBP17.57■□□□□ 0.4
ITGA11-203ENST00000562826 CUL7Q14999 1698 aa17.56■□□□□ 0.4
ITGA11-203ENST00000562826 RIMBP3CA6NJZ7 1639 aa17.55■□□□□ 0.4
ITGA11-203ENST00000562826 RIMBP3BA6NNM3 1639 aa17.55■□□□□ 0.4
ITGA11-203ENST00000562826 RIMBP3Q9UFD9 1639 aa17.55■□□□□ 0.4
ITGA11-203ENST00000562826 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
ITGA11-203ENST00000562826 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms