RNA–Protein interactions for RNA: ENST00000562179.1

LCTL-203, Transcript of lactase like, humanhuman

TSL 3

Gene LCTL, Length 210 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCTL-203ENST00000562179 NISCHQ9Y2I1 1504 aa24.58■■□□□ 1.53
LCTL-203ENST00000562179 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
LCTL-203ENST00000562179 ABCC9O60706 1549 aa20.96■□□□□ 0.95
LCTL-203ENST00000562179 ZCCHC6Q5VYS8 1495 aaKnown RBP20.54■□□□□ 0.88
LCTL-203ENST00000562179 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
LCTL-203ENST00000562179 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
LCTL-203ENST00000562179 NACADO15069 1562 aa20.42■□□□□ 0.86
LCTL-203ENST00000562179 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
LCTL-203ENST00000562179 DCAF8L2P0C7V8 631 aa20.18■□□□□ 0.82
LCTL-203ENST00000562179 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
LCTL-203ENST00000562179 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
LCTL-203ENST00000562179 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
LCTL-203ENST00000562179 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
LCTL-203ENST00000562179 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.72
LCTL-203ENST00000562179 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
LCTL-203ENST00000562179 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
LCTL-203ENST00000562179 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
LCTL-203ENST00000562179 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
LCTL-203ENST00000562179 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
LCTL-203ENST00000562179 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
LCTL-203ENST00000562179 MROH2BQ7Z745 1585 aa18.92■□□□□ 0.62
LCTL-203ENST00000562179 PEG3Q9GZU2 1588 aa18.92■□□□□ 0.62
LCTL-203ENST00000562179 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
LCTL-203ENST00000562179 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
LCTL-203ENST00000562179 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
LCTL-203ENST00000562179 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
LCTL-203ENST00000562179 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
LCTL-203ENST00000562179 WIZO95785 1651 aa18.73■□□□□ 0.59
LCTL-203ENST00000562179 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
LCTL-203ENST00000562179 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
LCTL-203ENST00000562179 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
LCTL-203ENST00000562179 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
LCTL-203ENST00000562179 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
LCTL-203ENST00000562179 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
LCTL-203ENST00000562179 NESP48681 1621 aa18.23■□□□□ 0.51
LCTL-203ENST00000562179 CFTRP13569 1480 aa18.23■□□□□ 0.51
LCTL-203ENST00000562179 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
LCTL-203ENST00000562179 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
LCTL-203ENST00000562179 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
LCTL-203ENST00000562179 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
LCTL-203ENST00000562179 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
LCTL-203ENST00000562179 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
LCTL-203ENST00000562179 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
LCTL-203ENST00000562179 MRC2Q9UBG0 1479 aa17.92■□□□□ 0.46
LCTL-203ENST00000562179 WDR62O43379 1518 aa17.9■□□□□ 0.46
LCTL-203ENST00000562179 CUX2O14529 1486 aa17.87■□□□□ 0.45
LCTL-203ENST00000562179 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
LCTL-203ENST00000562179 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
LCTL-203ENST00000562179 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
LCTL-203ENST00000562179 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
LCTL-203ENST00000562179 CUX1P39880 1505 aa17.73■□□□□ 0.43
LCTL-203ENST00000562179 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
LCTL-203ENST00000562179 WRNQ14191 1432 aaPredicted RBP eCLIP17.67■□□□□ 0.42
LCTL-203ENST00000562179 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
LCTL-203ENST00000562179 POLA1P09884 1462 aaPredicted RBP17.65■□□□□ 0.42
LCTL-203ENST00000562179 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
LCTL-203ENST00000562179 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
LCTL-203ENST00000562179 FGD5Q6ZNL6 1462 aa17.62■□□□□ 0.41
LCTL-203ENST00000562179 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
LCTL-203ENST00000562179 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
LCTL-203ENST00000562179 SOGA1O94964 1423 aa17.54■□□□□ 0.4
LCTL-203ENST00000562179 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
LCTL-203ENST00000562179 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
LCTL-203ENST00000562179 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
LCTL-203ENST00000562179 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
LCTL-203ENST00000562179 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
LCTL-203ENST00000562179 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.38
LCTL-203ENST00000562179 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
LCTL-203ENST00000562179 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
LCTL-203ENST00000562179 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
LCTL-203ENST00000562179 GRIN2BQ13224 1484 aa17.33■□□□□ 0.37
LCTL-203ENST00000562179 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
LCTL-203ENST00000562179 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
LCTL-203ENST00000562179 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
LCTL-203ENST00000562179 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
LCTL-203ENST00000562179 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
LCTL-203ENST00000562179 SNAPC4Q5SXM2 1469 aa17.25■□□□□ 0.35
LCTL-203ENST00000562179 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
LCTL-203ENST00000562179 CHD1O14646 1710 aa17.21■□□□□ 0.35
LCTL-203ENST00000562179 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
LCTL-203ENST00000562179 IGF1RP08069 1367 aa17.21■□□□□ 0.35
LCTL-203ENST00000562179 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
LCTL-203ENST00000562179 CUL7Q14999 1698 aa17.19■□□□□ 0.34
LCTL-203ENST00000562179 FHAD1B1AJZ9 1412 aa17.18■□□□□ 0.34
LCTL-203ENST00000562179 EEA1Q15075 1411 aa17.13■□□□□ 0.33
LCTL-203ENST00000562179 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
LCTL-203ENST00000562179 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
LCTL-203ENST00000562179 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
LCTL-203ENST00000562179 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
LCTL-203ENST00000562179 NUP160Q12769 1436 aa17.07■□□□□ 0.32
LCTL-203ENST00000562179 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
LCTL-203ENST00000562179 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
LCTL-203ENST00000562179 CEP170Q5SW79 1584 aa17.03■□□□□ 0.32
LCTL-203ENST00000562179 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.32
LCTL-203ENST00000562179 FBLN2P98095 1184 aa17.02■□□□□ 0.32
LCTL-203ENST00000562179 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.32
LCTL-203ENST00000562179 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
LCTL-203ENST00000562179 KIF21BO75037 1637 aa16.96■□□□□ 0.31
LCTL-203ENST00000562179 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
LCTL-203ENST00000562179 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms