RNA–Protein interactions for RNA: ENST00000562117.1

GGA2-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-202ENST00000562117 NISCHQ9Y2I1 1504 aa30.73■■■□□ 2.51
GGA2-202ENST00000562117 CCDC180Q9P1Z9 1646 aa26.99■■□□□ 1.91
GGA2-202ENST00000562117 ABCC9O60706 1549 aa25.94■■□□□ 1.74
GGA2-202ENST00000562117 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
GGA2-202ENST00000562117 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
GGA2-202ENST00000562117 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
GGA2-202ENST00000562117 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
GGA2-202ENST00000562117 NACADO15069 1562 aa25.34■■□□□ 1.65
GGA2-202ENST00000562117 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
GGA2-202ENST00000562117 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
GGA2-202ENST00000562117 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
GGA2-202ENST00000562117 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
GGA2-202ENST00000562117 PABPN1Q86U42 306 aaKnown RBP eCLIP24.41■■□□□ 1.5
GGA2-202ENST00000562117 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
GGA2-202ENST00000562117 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
GGA2-202ENST00000562117 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
GGA2-202ENST00000562117 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
GGA2-202ENST00000562117 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
GGA2-202ENST00000562117 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
GGA2-202ENST00000562117 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
GGA2-202ENST00000562117 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
GGA2-202ENST00000562117 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
GGA2-202ENST00000562117 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
GGA2-202ENST00000562117 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
GGA2-202ENST00000562117 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
GGA2-202ENST00000562117 NCAPD3P42695 1498 aa23.42■■□□□ 1.34
GGA2-202ENST00000562117 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
GGA2-202ENST00000562117 WIZO95785 1651 aa23.38■■□□□ 1.33
GGA2-202ENST00000562117 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
GGA2-202ENST00000562117 HMGXB3Q12766 1538 aa23.27■■□□□ 1.32
GGA2-202ENST00000562117 TOP2AP11388 1531 aaKnown RBP23.21■■□□□ 1.31
GGA2-202ENST00000562117 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
GGA2-202ENST00000562117 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
GGA2-202ENST00000562117 CFTRP13569 1480 aa22.72■■□□□ 1.23
GGA2-202ENST00000562117 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
GGA2-202ENST00000562117 NESP48681 1621 aa22.58■■□□□ 1.21
GGA2-202ENST00000562117 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
GGA2-202ENST00000562117 FANCD2Q9BXW9 1451 aa22.46■■□□□ 1.19
GGA2-202ENST00000562117 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
GGA2-202ENST00000562117 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
GGA2-202ENST00000562117 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
GGA2-202ENST00000562117 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
GGA2-202ENST00000562117 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.161e-7■■■■■ 66.8
GGA2-202ENST00000562117 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
GGA2-202ENST00000562117 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
GGA2-202ENST00000562117 TRIM41Q8WV44 630 aa22.24■■□□□ 1.15
GGA2-202ENST00000562117 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
GGA2-202ENST00000562117 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
GGA2-202ENST00000562117 CUX1P39880 1505 aa22.15■■□□□ 1.14
GGA2-202ENST00000562117 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.13
GGA2-202ENST00000562117 TOPBP1Q92547 1522 aa22.14■■□□□ 1.13
GGA2-202ENST00000562117 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
GGA2-202ENST00000562117 SYNJ1O43426 1573 aa22.08■■□□□ 1.13
GGA2-202ENST00000562117 WDR62O43379 1518 aa22.08■■□□□ 1.13
GGA2-202ENST00000562117 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
GGA2-202ENST00000562117 THOC2Q8NI27 1593 aaKnown RBP22.06■■□□□ 1.12
GGA2-202ENST00000562117 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
GGA2-202ENST00000562117 SOGA1O94964 1423 aa21.99■■□□□ 1.11
GGA2-202ENST00000562117 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
GGA2-202ENST00000562117 CUX2O14529 1486 aa21.92■■□□□ 1.1
GGA2-202ENST00000562117 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
GGA2-202ENST00000562117 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
GGA2-202ENST00000562117 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
GGA2-202ENST00000562117 KIF27Q86VH2 1401 aa21.81■■□□□ 1.08
GGA2-202ENST00000562117 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
GGA2-202ENST00000562117 EEA1Q15075 1411 aa21.79■■□□□ 1.08
GGA2-202ENST00000562117 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
GGA2-202ENST00000562117 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
GGA2-202ENST00000562117 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
GGA2-202ENST00000562117 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
GGA2-202ENST00000562117 FAM9AQ8IZU1 332 aaPredicted RBP21.7■■□□□ 1.06
GGA2-202ENST00000562117 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.061e-8■■■■□ 25.4
GGA2-202ENST00000562117 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.06
GGA2-202ENST00000562117 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
GGA2-202ENST00000562117 IGF1RP08069 1367 aa21.68■■□□□ 1.06
GGA2-202ENST00000562117 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
GGA2-202ENST00000562117 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
GGA2-202ENST00000562117 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
GGA2-202ENST00000562117 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
GGA2-202ENST00000562117 CARMIL1Q5VZK9 1371 aa21.56■■□□□ 1.04
GGA2-202ENST00000562117 MAGI1Q96QZ7 1491 aaPredicted RBP21.51■■□□□ 1.03
GGA2-202ENST00000562117 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
GGA2-202ENST00000562117 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
GGA2-202ENST00000562117 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
GGA2-202ENST00000562117 PBRM1Q86U86 1689 aa21.47■■□□□ 1.03
GGA2-202ENST00000562117 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
GGA2-202ENST00000562117 CUL7Q14999 1698 aa21.46■■□□□ 1.03
GGA2-202ENST00000562117 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.03
GGA2-202ENST00000562117 SYNJ2O15056 1496 aa21.42■■□□□ 1.02
GGA2-202ENST00000562117 FBLN2P98095 1184 aa21.41■■□□□ 1.02
GGA2-202ENST00000562117 KIF21BO75037 1637 aa21.39■■□□□ 1.01
GGA2-202ENST00000562117 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
GGA2-202ENST00000562117 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
GGA2-202ENST00000562117 UBTFP17480 764 aaKnown RBP21.37■■□□□ 1.01
GGA2-202ENST00000562117 GOLGA3Q08378 1498 aa21.37■■□□□ 1.01
GGA2-202ENST00000562117 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
GGA2-202ENST00000562117 GRIN2AQ12879 1464 aa21.32■■□□□ 1
GGA2-202ENST00000562117 TNIKQ9UKE5 1360 aa21.26■□□□□ 0.99
GGA2-202ENST00000562117 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
GGA2-202ENST00000562117 NUP160Q12769 1436 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms