RNA–Protein interactions for RNA: ENST00000562055.1

CASKIN1-202, Transcript of CASK interacting protein 1, humanhuman

TSL 2

Gene CASKIN1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1-202ENST00000562055 NISCHQ9Y2I1 1504 aa38.25■■■■□ 3.71
CASKIN1-202ENST00000562055 CCDC180Q9P1Z9 1646 aa33.93■■■■□ 3.02
CASKIN1-202ENST00000562055 ABCC9O60706 1549 aa32.94■■■□□ 2.86
CASKIN1-202ENST00000562055 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
CASKIN1-202ENST00000562055 NACADO15069 1562 aa31.85■■■□□ 2.69
CASKIN1-202ENST00000562055 RB1CC1Q8TDY2 1594 aa31.82■■■□□ 2.68
CASKIN1-202ENST00000562055 MYO15BQ96JP2 1530 aa31.79■■■□□ 2.68
CASKIN1-202ENST00000562055 DCAF8L2P0C7V8 631 aa31.74■■■□□ 2.67
CASKIN1-202ENST00000562055 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
CASKIN1-202ENST00000562055 UNC13AQ9UPW8 1703 aa31.1■■■□□ 2.57
CASKIN1-202ENST00000562055 SCRIBQ14160 1630 aa30.9■■■□□ 2.54
CASKIN1-202ENST00000562055 BICRAQ9NZM4 1560 aa30.88■■■□□ 2.53
CASKIN1-202ENST00000562055 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.52
CASKIN1-202ENST00000562055 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
CASKIN1-202ENST00000562055 DNAJC5BQ9UF47 199 aa30.1■■■□□ 2.41
CASKIN1-202ENST00000562055 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
CASKIN1-202ENST00000562055 CC2D2AQ9P2K1 1620 aa29.84■■■□□ 2.37
CASKIN1-202ENST00000562055 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
CASKIN1-202ENST00000562055 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
CASKIN1-202ENST00000562055 BAZ1AQ9NRL2 1556 aaPredicted RBP29.62■■■□□ 2.33
CASKIN1-202ENST00000562055 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
CASKIN1-202ENST00000562055 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
CASKIN1-202ENST00000562055 NCAPD3P42695 1498 aa29.41■■■□□ 2.3
CASKIN1-202ENST00000562055 SMARCA2P51531 1590 aa29.4■■■□□ 2.3
CASKIN1-202ENST00000562055 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.29
CASKIN1-202ENST00000562055 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
CASKIN1-202ENST00000562055 RSF1Q96T23 1441 aaPredicted RBP29.21■■■□□ 2.27
CASKIN1-202ENST00000562055 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
CASKIN1-202ENST00000562055 WIZO95785 1651 aa29.12■■■□□ 2.25
CASKIN1-202ENST00000562055 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
CASKIN1-202ENST00000562055 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
CASKIN1-202ENST00000562055 NESP48681 1621 aa28.58■■■□□ 2.17
CASKIN1-202ENST00000562055 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
CASKIN1-202ENST00000562055 CCDC88BA6NC98 1476 aa28.51■■■□□ 2.15
CASKIN1-202ENST00000562055 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
CASKIN1-202ENST00000562055 CFTRP13569 1480 aa28.43■■■□□ 2.14
CASKIN1-202ENST00000562055 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
CASKIN1-202ENST00000562055 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
CASKIN1-202ENST00000562055 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.11
CASKIN1-202ENST00000562055 PRDM2Q13029 1718 aa28.2■■■□□ 2.1
CASKIN1-202ENST00000562055 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
CASKIN1-202ENST00000562055 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.1
CASKIN1-202ENST00000562055 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
CASKIN1-202ENST00000562055 CUX2O14529 1486 aa28.08■■■□□ 2.09
CASKIN1-202ENST00000562055 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
CASKIN1-202ENST00000562055 WDR62O43379 1518 aa27.98■■■□□ 2.07
CASKIN1-202ENST00000562055 URB2Q14146 1524 aaKnown RBP27.91■■■□□ 2.06
CASKIN1-202ENST00000562055 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
CASKIN1-202ENST00000562055 DNMBPQ6XZF7 1577 aa27.76■■■□□ 2.03
CASKIN1-202ENST00000562055 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
CASKIN1-202ENST00000562055 CUX1P39880 1505 aa27.63■■■□□ 2.01
CASKIN1-202ENST00000562055 POLA1P09884 1462 aaPredicted RBP27.55■■■□□ 2
CASKIN1-202ENST00000562055 IFT140Q96RY7 1462 aa27.55■■■□□ 2
CASKIN1-202ENST00000562055 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
CASKIN1-202ENST00000562055 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
CASKIN1-202ENST00000562055 TARBP1Q13395 1621 aaKnown RBP27.48■■□□□ 1.99
CASKIN1-202ENST00000562055 TOP2BQ02880 1626 aa27.45■■□□□ 1.99
CASKIN1-202ENST00000562055 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.98
CASKIN1-202ENST00000562055 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
CASKIN1-202ENST00000562055 SOGA1O94964 1423 aa27.41■■□□□ 1.98
CASKIN1-202ENST00000562055 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
CASKIN1-202ENST00000562055 ZNF608Q9ULD9 1512 aaPredicted RBP27.39■■□□□ 1.98
CASKIN1-202ENST00000562055 EIF4G3O43432 1585 aaKnown RBP27.29■■□□□ 1.96
CASKIN1-202ENST00000562055 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
CASKIN1-202ENST00000562055 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.96
CASKIN1-202ENST00000562055 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.958e-7■■■■■ 28.7
CASKIN1-202ENST00000562055 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
CASKIN1-202ENST00000562055 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
CASKIN1-202ENST00000562055 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
CASKIN1-202ENST00000562055 GRIN2BQ13224 1484 aa27.09■■□□□ 1.93
CASKIN1-202ENST00000562055 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
CASKIN1-202ENST00000562055 MAGI1Q96QZ7 1491 aaPredicted RBP27.01■■□□□ 1.91
CASKIN1-202ENST00000562055 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
CASKIN1-202ENST00000562055 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
CASKIN1-202ENST00000562055 TRIM41Q8WV44 630 aa26.95■■□□□ 1.9
CASKIN1-202ENST00000562055 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.9
CASKIN1-202ENST00000562055 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
CASKIN1-202ENST00000562055 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
CASKIN1-202ENST00000562055 SYNJ2O15056 1496 aa26.9■■□□□ 1.9
CASKIN1-202ENST00000562055 CHD1O14646 1710 aa26.89■■□□□ 1.9
CASKIN1-202ENST00000562055 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
CASKIN1-202ENST00000562055 FBLN2P98095 1184 aa26.82■■□□□ 1.88
CASKIN1-202ENST00000562055 CHMP7Q8WUX9 453 aaPredicted RBP26.82■■□□□ 1.88
CASKIN1-202ENST00000562055 IGF1RP08069 1367 aa26.82■■□□□ 1.88
CASKIN1-202ENST00000562055 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
CASKIN1-202ENST00000562055 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
CASKIN1-202ENST00000562055 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
CASKIN1-202ENST00000562055 CUL7Q14999 1698 aa26.72■■□□□ 1.87
CASKIN1-202ENST00000562055 RUSC2Q8N2Y8 1516 aa26.71■■□□□ 1.87
CASKIN1-202ENST00000562055 CLASP1Q7Z460 1538 aa26.65■■□□□ 1.86
CASKIN1-202ENST00000562055 NUP160Q12769 1436 aa26.65■■□□□ 1.86
CASKIN1-202ENST00000562055 CARMIL1Q5VZK9 1371 aa26.63■■□□□ 1.85
CASKIN1-202ENST00000562055 CEP170Q5SW79 1584 aa26.59■■□□□ 1.85
CASKIN1-202ENST00000562055 EEA1Q15075 1411 aa26.55■■□□□ 1.84
CASKIN1-202ENST00000562055 RAPGEF2Q9Y4G8 1499 aa26.49■■□□□ 1.83
CASKIN1-202ENST00000562055 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
CASKIN1-202ENST00000562055 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
CASKIN1-202ENST00000562055 CSRNP3Q8WYN3 585 aa26.46■■□□□ 1.83
CASKIN1-202ENST00000562055 RIMBP3CA6NJZ7 1639 aa26.45■■□□□ 1.82
CASKIN1-202ENST00000562055 RIMBP3BA6NNM3 1639 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms