RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 NISCHQ9Y2I1 1504 aa61.28■■■■■ 7.4
AP4E1-207ENST00000561441 CCDC180Q9P1Z9 1646 aa53.5■■■■■ 6.16
AP4E1-207ENST00000561441 ZCCHC6Q5VYS8 1495 aaKnown RBP51.42■■■■■ 5.82
AP4E1-207ENST00000561441 ABCC9O60706 1549 aa50.88■■■■■ 5.74
AP4E1-207ENST00000561441 DCAF8L2P0C7V8 631 aa50.69■■■■■ 5.7
AP4E1-207ENST00000561441 DCAF1Q9Y4B6 1507 aa50.68■■■■■ 5.7
AP4E1-207ENST00000561441 MYO15BQ96JP2 1530 aa50.19■■■■■ 5.63
AP4E1-207ENST00000561441 NACADO15069 1562 aa49.94■■■■■ 5.59
AP4E1-207ENST00000561441 SHROOM4Q9ULL8 1493 aa49.77■■■■■ 5.56
AP4E1-207ENST00000561441 RB1CC1Q8TDY2 1594 aa49.56■■■■■ 5.52
AP4E1-207ENST00000561441 SCRIBQ14160 1630 aa49.18■■■■■ 5.46
AP4E1-207ENST00000561441 UNC13AQ9UPW8 1703 aa48.47■■■■■ 5.35
AP4E1-207ENST00000561441 BICRAQ9NZM4 1560 aa48.09■■■■■ 5.29
AP4E1-207ENST00000561441 PABPN1Q86U42 306 aaKnown RBP eCLIP47.96■■■■■ 5.27
AP4E1-207ENST00000561441 SUPT5HO00267 1087 aaKnown RBP47.76■■■■■ 5.24
AP4E1-207ENST00000561441 CECR2Q9BXF3 1484 aa47.65■■■■■ 5.22
AP4E1-207ENST00000561441 RSF1Q96T23 1441 aaPredicted RBP47.45■■■■■ 5.19
AP4E1-207ENST00000561441 MROH2BQ7Z745 1585 aa47.33■■■■■ 5.17
AP4E1-207ENST00000561441 BAZ1AQ9NRL2 1556 aaPredicted RBP47.33■■■■■ 5.17
AP4E1-207ENST00000561441 SMARCA4P51532 1647 aa47.13■■■■■ 5.14
AP4E1-207ENST00000561441 WIZO95785 1651 aa46.88■■■■■ 5.1
AP4E1-207ENST00000561441 EIF4G1Q04637 1599 aaKnown RBP46.65■■■■■ 5.06
AP4E1-207ENST00000561441 PEG3Q9GZU2 1588 aa46.6■■■■■ 5.05
AP4E1-207ENST00000561441 ATAD2BQ9ULI0 1458 aa46.47■■■■■ 5.03
AP4E1-207ENST00000561441 TOP2AP11388 1531 aaKnown RBP46.42■■■■■ 5.02
AP4E1-207ENST00000561441 SMARCA2P51531 1590 aa46.41■■■■■ 5.02
AP4E1-207ENST00000561441 BAZ1BQ9UIG0 1483 aaKnown RBP46.17■■■■■ 4.98
AP4E1-207ENST00000561441 NCAPD3P42695 1498 aa46.13■■■■■ 4.97
AP4E1-207ENST00000561441 CC2D2AQ9P2K1 1620 aa46.02■■■■■ 4.96
AP4E1-207ENST00000561441 HMGXB3Q12766 1538 aa46■■■■■ 4.96
AP4E1-207ENST00000561441 CCDC88BA6NC98 1476 aa45.97■■■■■ 4.95
AP4E1-207ENST00000561441 CHIC1Q5VXU3 224 aa45.61■■■■■ 4.89
AP4E1-207ENST00000561441 DNAJC5BQ9UF47 199 aa45.15■■■■■ 4.82
AP4E1-207ENST00000561441 CFTRP13569 1480 aa45.02■■■■■ 4.8
AP4E1-207ENST00000561441 TRIM41Q8WV44 630 aa44.95■■■■■ 4.79
AP4E1-207ENST00000561441 CADPSQ9ULU8 1353 aa44.93■■■■■ 4.78
AP4E1-207ENST00000561441 ABCC8Q09428 1581 aa44.87■■■■■ 4.77
AP4E1-207ENST00000561441 WRNQ14191 1432 aaPredicted RBP eCLIP44.66■■■■■ 4.74
AP4E1-207ENST00000561441 PRDM2Q13029 1718 aa44.64■■■■■ 4.74
AP4E1-207ENST00000561441 NESP48681 1621 aa44.58■■■■■ 4.73
AP4E1-207ENST00000561441 LAMC3Q9Y6N6 1575 aa44.56■■■■■ 4.72
AP4E1-207ENST00000561441 SYNJ1O43426 1573 aa44.46■■■■■ 4.71
AP4E1-207ENST00000561441 FANCD2Q9BXW9 1451 aa44.4■■■■■ 4.7
AP4E1-207ENST00000561441 TOP2BQ02880 1626 aa44.3■■■■■ 4.68
AP4E1-207ENST00000561441 CUX1P39880 1505 aa44.27■■■■■ 4.68
AP4E1-207ENST00000561441 PDS5BQ9NTI5 1447 aa44.25■■■■■ 4.67
AP4E1-207ENST00000561441 BIVM-ERCC5R4GMW8 1640 aa44.24■■■■■ 4.67
AP4E1-207ENST00000561441 CEP164Q9UPV0 1460 aa44.15■■■■■ 4.66
AP4E1-207ENST00000561441 FAM9AQ8IZU1 332 aaPredicted RBP44.1■■■■■ 4.65
AP4E1-207ENST00000561441 SOGA1O94964 1423 aa44.02■■■■■ 4.64
AP4E1-207ENST00000561441 KIF21AQ7Z4S6 1674 aa43.98■■■■■ 4.63
AP4E1-207ENST00000561441 DNMBPQ6XZF7 1577 aa43.94■■■■■ 4.62
AP4E1-207ENST00000561441 TOPBP1Q92547 1522 aa43.89■■■■■ 4.62
AP4E1-207ENST00000561441 EEA1Q15075 1411 aa43.88■■■■■ 4.61
AP4E1-207ENST00000561441 URB2Q14146 1524 aaKnown RBP43.87■■■■■ 4.61
AP4E1-207ENST00000561441 RUSC2Q8N2Y8 1516 aa43.86■■■■■ 4.61
AP4E1-207ENST00000561441 LOC105371045A0A1W2PR82 267 aa43.84■■■■■ 4.61
AP4E1-207ENST00000561441 FGD5Q6ZNL6 1462 aa43.83■■■■■ 4.61
AP4E1-207ENST00000561441 MRC2Q9UBG0 1479 aa43.69■■■■■ 4.58
AP4E1-207ENST00000561441 CSRNP3Q8WYN3 585 aa43.68■■■■■ 4.58
AP4E1-207ENST00000561441 POLA1P09884 1462 aaPredicted RBP43.66■■■■■ 4.58
AP4E1-207ENST00000561441 ERCC6Q03468 1493 aa43.64■■■■■ 4.58
AP4E1-207ENST00000561441 KIF27Q86VH2 1401 aa43.55■■■■■ 4.56
AP4E1-207ENST00000561441 RAD54L2Q9Y4B4 1467 aa43.52■■■■■ 4.56
AP4E1-207ENST00000561441 CUX2O14529 1486 aa43.49■■■■■ 4.55
AP4E1-207ENST00000561441 WDR62O43379 1518 aa43.47■■■■■ 4.55
AP4E1-207ENST00000561441 EHMT2Q96KQ7 1210 aa43.46■■■■■ 4.55
AP4E1-207ENST00000561441 ABCA10Q8WWZ4 1543 aa43.45■■■■■ 4.55
AP4E1-207ENST00000561441 THOC2Q8NI27 1593 aaKnown RBP43.38■■■■■ 4.53
AP4E1-207ENST00000561441 KIF21BO75037 1637 aa43.28■■■■■ 4.52
AP4E1-207ENST00000561441 WDR97A6NE52 1622 aa43.27■■■■■ 4.52
AP4E1-207ENST00000561441 TARBP1Q13395 1621 aaKnown RBP43.25■■■■■ 4.51
AP4E1-207ENST00000561441 GOLGA3Q08378 1498 aa43.24■■■■■ 4.51
AP4E1-207ENST00000561441 IGF1RP08069 1367 aa43.22■■■■■ 4.51
AP4E1-207ENST00000561441 PRXQ9BXM0 1461 aa43.2■■■■■ 4.51
AP4E1-207ENST00000561441 TDRD9Q8NDG6 1382 aaKnown RBP43.13■■■■■ 4.49
AP4E1-207ENST00000561441 IFT140Q96RY7 1462 aa43.12■■■■■ 4.49
AP4E1-207ENST00000561441 RAPGEF2Q9Y4G8 1499 aa43.12■■■■■ 4.49
AP4E1-207ENST00000561441 ABCA5Q8WWZ7 1642 aa43.08■■■■■ 4.49
AP4E1-207ENST00000561441 TNIKQ9UKE5 1360 aa43.08■■■■■ 4.49
AP4E1-207ENST00000561441 UBTFP17480 764 aaKnown RBP43.07■■■■■ 4.48
AP4E1-207ENST00000561441 ERICH3Q5RHP9 1530 aa43.07■■■■■ 4.48
AP4E1-207ENST00000561441 GAPVD1Q14C86 1478 aa43.03■■■■■ 4.48
AP4E1-207ENST00000561441 CARMIL1Q5VZK9 1371 aa42.99■■■■■ 4.47
AP4E1-207ENST00000561441 AQRO60306 1485 aaKnown RBP eCLIP42.9■■■■■ 4.46
AP4E1-207ENST00000561441 ZNF608Q9ULD9 1512 aaPredicted RBP42.9■■■■■ 4.46
AP4E1-207ENST00000561441 CUL7Q14999 1698 aa42.84■■■■■ 4.45
AP4E1-207ENST00000561441 CEP162Q5TB80 1403 aa42.81■■■■■ 4.44
AP4E1-207ENST00000561441 GRIN2BQ13224 1484 aa42.75■■■■■ 4.43
AP4E1-207ENST00000561441 PBRM1Q86U86 1689 aa42.74■■■■■ 4.43
AP4E1-207ENST00000561441 EIF4G3O43432 1585 aaKnown RBP42.7■■■■■ 4.43
AP4E1-207ENST00000561441 FHAD1B1AJZ9 1412 aa42.58■■■■■ 4.41
AP4E1-207ENST00000561441 CLIP1P30622 1438 aa42.55■■■■■ 4.4
AP4E1-207ENST00000561441 ADAMTS12P58397 1594 aa42.54■■■■■ 4.4
AP4E1-207ENST00000561441 SNAPC4Q5SXM2 1469 aa42.48■■■■■ 4.39
AP4E1-207ENST00000561441 RANGAP1P46060 587 aaPredicted RBP42.43■■■■■ 4.38
AP4E1-207ENST00000561441 MAGI1Q96QZ7 1491 aaPredicted RBP42.4■■■■■ 4.38
AP4E1-207ENST00000561441 CTTNBP2Q8WZ74 1663 aa42.28■■■■■ 4.36
AP4E1-207ENST00000561441 SYNJ2O15056 1496 aa42.25■■■■■ 4.35
AP4E1-207ENST00000561441 GRIN2AQ12879 1464 aa42.22■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms