RNA–Protein interactions for RNA: ENST00000561399.5

PKNOX2-214, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 5

Gene PKNOX2, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-214ENST00000561399 NISCHQ9Y2I1 1504 aa38.37■■■■□ 3.73
PKNOX2-214ENST00000561399 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
PKNOX2-214ENST00000561399 ABCC9O60706 1549 aa33.05■■■□□ 2.88
PKNOX2-214ENST00000561399 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
PKNOX2-214ENST00000561399 NACADO15069 1562 aa32.02■■■□□ 2.72
PKNOX2-214ENST00000561399 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
PKNOX2-214ENST00000561399 MYO15BQ96JP2 1530 aa31.92■■■□□ 2.7
PKNOX2-214ENST00000561399 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
PKNOX2-214ENST00000561399 DCAF1Q9Y4B6 1507 aa31.84■■■□□ 2.69
PKNOX2-214ENST00000561399 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
PKNOX2-214ENST00000561399 SCRIBQ14160 1630 aa31.05■■■□□ 2.56
PKNOX2-214ENST00000561399 BICRAQ9NZM4 1560 aa30.92■■■□□ 2.54
PKNOX2-214ENST00000561399 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
PKNOX2-214ENST00000561399 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
PKNOX2-214ENST00000561399 EIF4G1Q04637 1599 aaKnown RBP30.14■■■□□ 2.42
PKNOX2-214ENST00000561399 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
PKNOX2-214ENST00000561399 CC2D2AQ9P2K1 1620 aa29.95■■■□□ 2.38
PKNOX2-214ENST00000561399 BAZ1AQ9NRL2 1556 aaPredicted RBP29.78■■■□□ 2.36
PKNOX2-214ENST00000561399 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
PKNOX2-214ENST00000561399 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
PKNOX2-214ENST00000561399 SMARCA2P51531 1590 aa29.57■■■□□ 2.32
PKNOX2-214ENST00000561399 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
PKNOX2-214ENST00000561399 ATAD2BQ9ULI0 1458 aa29.5■■■□□ 2.31
PKNOX2-214ENST00000561399 PEG3Q9GZU2 1588 aa29.49■■■□□ 2.31
PKNOX2-214ENST00000561399 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
PKNOX2-214ENST00000561399 HMGXB3Q12766 1538 aa29.41■■■□□ 2.3
PKNOX2-214ENST00000561399 BAZ1BQ9UIG0 1483 aaKnown RBP29.32■■■□□ 2.28
PKNOX2-214ENST00000561399 RSF1Q96T23 1441 aaPredicted RBP29.26■■■□□ 2.27
PKNOX2-214ENST00000561399 WIZO95785 1651 aa29.22■■■□□ 2.27
PKNOX2-214ENST00000561399 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
PKNOX2-214ENST00000561399 LAMC3Q9Y6N6 1575 aa28.73■■■□□ 2.19
PKNOX2-214ENST00000561399 NESP48681 1621 aa28.63■■■□□ 2.17
PKNOX2-214ENST00000561399 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
PKNOX2-214ENST00000561399 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
PKNOX2-214ENST00000561399 CCDC88BA6NC98 1476 aa28.59■■■□□ 2.17
PKNOX2-214ENST00000561399 ERCC6Q03468 1493 aa28.56■■■□□ 2.16
PKNOX2-214ENST00000561399 PDS5BQ9NTI5 1447 aa28.52■■■□□ 2.16
PKNOX2-214ENST00000561399 CFTRP13569 1480 aa28.51■■■□□ 2.15
PKNOX2-214ENST00000561399 PRDM2Q13029 1718 aa28.39■■■□□ 2.14
PKNOX2-214ENST00000561399 KIF21AQ7Z4S6 1674 aa28.37■■■□□ 2.13
PKNOX2-214ENST00000561399 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
PKNOX2-214ENST00000561399 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
PKNOX2-214ENST00000561399 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
PKNOX2-214ENST00000561399 CUX2O14529 1486 aa28.21■■■□□ 2.11
PKNOX2-214ENST00000561399 MRC2Q9UBG0 1479 aa28.2■■■□□ 2.1
PKNOX2-214ENST00000561399 WDR62O43379 1518 aa28.09■■■□□ 2.09
PKNOX2-214ENST00000561399 URB2Q14146 1524 aaKnown RBP27.97■■■□□ 2.07
PKNOX2-214ENST00000561399 ABCC8Q09428 1581 aa27.97■■■□□ 2.07
PKNOX2-214ENST00000561399 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
PKNOX2-214ENST00000561399 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
PKNOX2-214ENST00000561399 CUX1P39880 1505 aa27.71■■■□□ 2.03
PKNOX2-214ENST00000561399 IFT140Q96RY7 1462 aa27.69■■■□□ 2.02
PKNOX2-214ENST00000561399 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
PKNOX2-214ENST00000561399 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.01
PKNOX2-214ENST00000561399 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
PKNOX2-214ENST00000561399 TOP2BQ02880 1626 aa27.58■■■□□ 2.01
PKNOX2-214ENST00000561399 BIVM-ERCC5R4GMW8 1640 aa27.58■■■□□ 2.01
PKNOX2-214ENST00000561399 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
PKNOX2-214ENST00000561399 SYNJ1O43426 1573 aa27.52■■■□□ 2
PKNOX2-214ENST00000561399 SOGA1O94964 1423 aa27.52■■■□□ 2
PKNOX2-214ENST00000561399 WDR97A6NE52 1622 aa27.47■■□□□ 1.99
PKNOX2-214ENST00000561399 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
PKNOX2-214ENST00000561399 ZNF608Q9ULD9 1512 aaPredicted RBP27.44■■□□□ 1.98
PKNOX2-214ENST00000561399 EIF4G3O43432 1585 aaKnown RBP27.43■■□□□ 1.98
PKNOX2-214ENST00000561399 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
PKNOX2-214ENST00000561399 AQRO60306 1485 aaKnown RBP eCLIP27.31■■□□□ 1.96
PKNOX2-214ENST00000561399 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
PKNOX2-214ENST00000561399 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
PKNOX2-214ENST00000561399 GAPVD1Q14C86 1478 aa27.23■■□□□ 1.95
PKNOX2-214ENST00000561399 GRIN2BQ13224 1484 aa27.22■■□□□ 1.95
PKNOX2-214ENST00000561399 PBRM1Q86U86 1689 aa27.19■■□□□ 1.94
PKNOX2-214ENST00000561399 MAGI1Q96QZ7 1491 aaPredicted RBP27.16■■□□□ 1.94
PKNOX2-214ENST00000561399 SNAPC4Q5SXM2 1469 aa27.12■■□□□ 1.93
PKNOX2-214ENST00000561399 ERICH3Q5RHP9 1530 aa27.09■■□□□ 1.93
PKNOX2-214ENST00000561399 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
PKNOX2-214ENST00000561399 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
PKNOX2-214ENST00000561399 CHD1O14646 1710 aa27.04■■□□□ 1.92
PKNOX2-214ENST00000561399 SYNJ2O15056 1496 aa27.03■■□□□ 1.92
PKNOX2-214ENST00000561399 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
PKNOX2-214ENST00000561399 DNAJC5Q9H3Z4 198 aa27.01■■□□□ 1.91
PKNOX2-214ENST00000561399 ADAMTS12P58397 1594 aa26.98■■□□□ 1.91
PKNOX2-214ENST00000561399 FBLN2P98095 1184 aa26.96■■□□□ 1.91
PKNOX2-214ENST00000561399 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
PKNOX2-214ENST00000561399 FHAD1B1AJZ9 1412 aa26.94■■□□□ 1.9
PKNOX2-214ENST00000561399 CUL7Q14999 1698 aa26.91■■□□□ 1.9
PKNOX2-214ENST00000561399 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
PKNOX2-214ENST00000561399 IGF1RP08069 1367 aa26.85■■□□□ 1.89
PKNOX2-214ENST00000561399 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
PKNOX2-214ENST00000561399 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
PKNOX2-214ENST00000561399 EEA1Q15075 1411 aa26.73■■□□□ 1.87
PKNOX2-214ENST00000561399 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
PKNOX2-214ENST00000561399 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
PKNOX2-214ENST00000561399 NUP160Q12769 1436 aa26.73■■□□□ 1.87
PKNOX2-214ENST00000561399 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
PKNOX2-214ENST00000561399 RAPGEF2Q9Y4G8 1499 aa26.63■■□□□ 1.85
PKNOX2-214ENST00000561399 ARHGEF11O15085 1522 aa26.59■■□□□ 1.85
PKNOX2-214ENST00000561399 RIMBP3CA6NJZ7 1639 aa26.56■■□□□ 1.84
PKNOX2-214ENST00000561399 RIMBP3BA6NNM3 1639 aa26.56■■□□□ 1.84
PKNOX2-214ENST00000561399 RIMBP3Q9UFD9 1639 aa26.56■■□□□ 1.84
PKNOX2-214ENST00000561399 PRXQ9BXM0 1461 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms