RNA–Protein interactions for RNA: ENST00000561115.5

PKNOX2-212, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 5

Gene PKNOX2, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-212ENST00000561115 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
PKNOX2-212ENST00000561115 CCDC180Q9P1Z9 1646 aa32.89■■■□□ 2.86
PKNOX2-212ENST00000561115 ABCC9O60706 1549 aa31.54■■■□□ 2.64
PKNOX2-212ENST00000561115 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
PKNOX2-212ENST00000561115 DCAF1Q9Y4B6 1507 aa30.94■■■□□ 2.54
PKNOX2-212ENST00000561115 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
PKNOX2-212ENST00000561115 NACADO15069 1562 aa30.83■■■□□ 2.53
PKNOX2-212ENST00000561115 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
PKNOX2-212ENST00000561115 RB1CC1Q8TDY2 1594 aa30.69■■■□□ 2.5
PKNOX2-212ENST00000561115 UNC13AQ9UPW8 1703 aa29.95■■■□□ 2.38
PKNOX2-212ENST00000561115 SCRIBQ14160 1630 aa29.91■■■□□ 2.38
PKNOX2-212ENST00000561115 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
PKNOX2-212ENST00000561115 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.33
PKNOX2-212ENST00000561115 SHROOM4Q9ULL8 1493 aa29.57■■■□□ 2.32
PKNOX2-212ENST00000561115 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
PKNOX2-212ENST00000561115 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
PKNOX2-212ENST00000561115 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
PKNOX2-212ENST00000561115 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
PKNOX2-212ENST00000561115 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
PKNOX2-212ENST00000561115 CC2D2AQ9P2K1 1620 aa28.61■■■□□ 2.17
PKNOX2-212ENST00000561115 RSF1Q96T23 1441 aaPredicted RBP28.58■■■□□ 2.17
PKNOX2-212ENST00000561115 PEG3Q9GZU2 1588 aa28.55■■■□□ 2.16
PKNOX2-212ENST00000561115 DNAJC5BQ9UF47 199 aa28.52■■■□□ 2.16
PKNOX2-212ENST00000561115 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
PKNOX2-212ENST00000561115 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
PKNOX2-212ENST00000561115 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
PKNOX2-212ENST00000561115 WIZO95785 1651 aa28.37■■■□□ 2.13
PKNOX2-212ENST00000561115 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
PKNOX2-212ENST00000561115 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
PKNOX2-212ENST00000561115 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
PKNOX2-212ENST00000561115 TOP2AP11388 1531 aaKnown RBP28.14■■■□□ 2.1
PKNOX2-212ENST00000561115 CCDC88BA6NC98 1476 aa27.82■■■□□ 2.04
PKNOX2-212ENST00000561115 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
PKNOX2-212ENST00000561115 LAMC3Q9Y6N6 1575 aa27.58■■■□□ 2.01
PKNOX2-212ENST00000561115 CFTRP13569 1480 aa27.57■■■□□ 2
PKNOX2-212ENST00000561115 NESP48681 1621 aa27.45■■□□□ 1.99
PKNOX2-212ENST00000561115 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
PKNOX2-212ENST00000561115 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
PKNOX2-212ENST00000561115 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
PKNOX2-212ENST00000561115 ERCC6Q03468 1493 aa27.16■■□□□ 1.94
PKNOX2-212ENST00000561115 CEP164Q9UPV0 1460 aa27.16■■□□□ 1.94
PKNOX2-212ENST00000561115 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
PKNOX2-212ENST00000561115 ABCC8Q09428 1581 aa27.03■■□□□ 1.92
PKNOX2-212ENST00000561115 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
PKNOX2-212ENST00000561115 THOC2Q8NI27 1593 aaKnown RBP26.96■■□□□ 1.91
PKNOX2-212ENST00000561115 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
PKNOX2-212ENST00000561115 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
PKNOX2-212ENST00000561115 WDR62O43379 1518 aa26.92■■□□□ 1.9
PKNOX2-212ENST00000561115 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
PKNOX2-212ENST00000561115 TOPBP1Q92547 1522 aa26.88■■□□□ 1.89
PKNOX2-212ENST00000561115 CUX1P39880 1505 aa26.85■■□□□ 1.89
PKNOX2-212ENST00000561115 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
PKNOX2-212ENST00000561115 BIVM-ERCC5R4GMW8 1640 aa26.8■■□□□ 1.88
PKNOX2-212ENST00000561115 CUX2O14529 1486 aa26.78■■□□□ 1.88
PKNOX2-212ENST00000561115 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
PKNOX2-212ENST00000561115 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
PKNOX2-212ENST00000561115 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
PKNOX2-212ENST00000561115 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
PKNOX2-212ENST00000561115 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
PKNOX2-212ENST00000561115 SOGA1O94964 1423 aa26.62■■□□□ 1.85
PKNOX2-212ENST00000561115 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
PKNOX2-212ENST00000561115 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
PKNOX2-212ENST00000561115 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
PKNOX2-212ENST00000561115 ABCA10Q8WWZ4 1543 aa26.51■■□□□ 1.83
PKNOX2-212ENST00000561115 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
PKNOX2-212ENST00000561115 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
PKNOX2-212ENST00000561115 TDRD9Q8NDG6 1382 aaKnown RBP26.34■■□□□ 1.81
PKNOX2-212ENST00000561115 KIF27Q86VH2 1401 aa26.34■■□□□ 1.81
PKNOX2-212ENST00000561115 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.8
PKNOX2-212ENST00000561115 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
PKNOX2-212ENST00000561115 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
PKNOX2-212ENST00000561115 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
PKNOX2-212ENST00000561115 EEA1Q15075 1411 aa26.26■■□□□ 1.79
PKNOX2-212ENST00000561115 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
PKNOX2-212ENST00000561115 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
PKNOX2-212ENST00000561115 IGF1RP08069 1367 aa26.2■■□□□ 1.78
PKNOX2-212ENST00000561115 RUSC2Q8N2Y8 1516 aa26.19■■□□□ 1.78
PKNOX2-212ENST00000561115 PBRM1Q86U86 1689 aa26.16■■□□□ 1.78
PKNOX2-212ENST00000561115 MAGI1Q96QZ7 1491 aaPredicted RBP26.12■■□□□ 1.77
PKNOX2-212ENST00000561115 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
PKNOX2-212ENST00000561115 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
PKNOX2-212ENST00000561115 CUL7Q14999 1698 aa26.06■■□□□ 1.76
PKNOX2-212ENST00000561115 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
PKNOX2-212ENST00000561115 CARMIL1Q5VZK9 1371 aa26.03■■□□□ 1.76
PKNOX2-212ENST00000561115 SYNJ2O15056 1496 aa26■■□□□ 1.75
PKNOX2-212ENST00000561115 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
PKNOX2-212ENST00000561115 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
PKNOX2-212ENST00000561115 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
PKNOX2-212ENST00000561115 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
PKNOX2-212ENST00000561115 RAPGEF2Q9Y4G8 1499 aa25.93■■□□□ 1.74
PKNOX2-212ENST00000561115 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
PKNOX2-212ENST00000561115 KIF21BO75037 1637 aa25.87■■□□□ 1.73
PKNOX2-212ENST00000561115 FBLN2P98095 1184 aa25.86■■□□□ 1.73
PKNOX2-212ENST00000561115 CHD1O14646 1710 aa25.85■■□□□ 1.73
PKNOX2-212ENST00000561115 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
PKNOX2-212ENST00000561115 NUP160Q12769 1436 aa25.78■■□□□ 1.72
PKNOX2-212ENST00000561115 GOLGA3Q08378 1498 aa25.74■■□□□ 1.71
PKNOX2-212ENST00000561115 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
PKNOX2-212ENST00000561115 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
PKNOX2-212ENST00000561115 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms