RNA–Protein interactions for RNA: ENST00000561106.1

SEMA6D-216, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-216ENST00000561106 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
SEMA6D-216ENST00000561106 CCDC180Q9P1Z9 1646 aa31.17■■■□□ 2.58
SEMA6D-216ENST00000561106 ABCC9O60706 1549 aa30.65■■■□□ 2.5
SEMA6D-216ENST00000561106 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
SEMA6D-216ENST00000561106 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.29
SEMA6D-216ENST00000561106 NACADO15069 1562 aa29.35■■■□□ 2.29
SEMA6D-216ENST00000561106 ZCCHC6Q5VYS8 1495 aaKnown RBP29.22■■■□□ 2.27
SEMA6D-216ENST00000561106 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
SEMA6D-216ENST00000561106 DCAF1Q9Y4B6 1507 aa29.01■■■□□ 2.23
SEMA6D-216ENST00000561106 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
SEMA6D-216ENST00000561106 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
SEMA6D-216ENST00000561106 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
SEMA6D-216ENST00000561106 SCRIBQ14160 1630 aa28.5■■■□□ 2.15
SEMA6D-216ENST00000561106 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
SEMA6D-216ENST00000561106 SHROOM4Q9ULL8 1493 aa28.13■■■□□ 2.09
SEMA6D-216ENST00000561106 EIF4G1Q04637 1599 aaKnown RBP27.78■■■□□ 2.04
SEMA6D-216ENST00000561106 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.03
SEMA6D-216ENST00000561106 CECR2Q9BXF3 1484 aa27.52■■■□□ 2
SEMA6D-216ENST00000561106 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
SEMA6D-216ENST00000561106 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
SEMA6D-216ENST00000561106 ATAD2BQ9ULI0 1458 aa27.14■■□□□ 1.94
SEMA6D-216ENST00000561106 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
SEMA6D-216ENST00000561106 MROH2BQ7Z745 1585 aa27.1■■□□□ 1.93
SEMA6D-216ENST00000561106 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
SEMA6D-216ENST00000561106 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
SEMA6D-216ENST00000561106 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
SEMA6D-216ENST00000561106 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
SEMA6D-216ENST00000561106 WIZO95785 1651 aa26.8■■□□□ 1.88
SEMA6D-216ENST00000561106 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
SEMA6D-216ENST00000561106 NESP48681 1621 aa26.54■■□□□ 1.84
SEMA6D-216ENST00000561106 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
SEMA6D-216ENST00000561106 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
SEMA6D-216ENST00000561106 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
SEMA6D-216ENST00000561106 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
SEMA6D-216ENST00000561106 CCDC88BA6NC98 1476 aa26.22■■□□□ 1.79
SEMA6D-216ENST00000561106 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
SEMA6D-216ENST00000561106 CFTRP13569 1480 aa26.17■■□□□ 1.78
SEMA6D-216ENST00000561106 KIF21AQ7Z4S6 1674 aa26.16■■□□□ 1.78
SEMA6D-216ENST00000561106 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
SEMA6D-216ENST00000561106 CUX2O14529 1486 aa26.09■■□□□ 1.77
SEMA6D-216ENST00000561106 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
SEMA6D-216ENST00000561106 FANCD2Q9BXW9 1451 aa26.02■■□□□ 1.76
SEMA6D-216ENST00000561106 CEP164Q9UPV0 1460 aa25.96■■□□□ 1.75
SEMA6D-216ENST00000561106 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
SEMA6D-216ENST00000561106 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
SEMA6D-216ENST00000561106 WDR62O43379 1518 aa25.85■■□□□ 1.73
SEMA6D-216ENST00000561106 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
SEMA6D-216ENST00000561106 DNAJC5Q9H3Z4 198 aa25.75■■□□□ 1.71
SEMA6D-216ENST00000561106 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
SEMA6D-216ENST00000561106 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
SEMA6D-216ENST00000561106 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
SEMA6D-216ENST00000561106 IFT140Q96RY7 1462 aa25.43■■□□□ 1.66
SEMA6D-216ENST00000561106 CUX1P39880 1505 aa25.42■■□□□ 1.66
SEMA6D-216ENST00000561106 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
SEMA6D-216ENST00000561106 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
SEMA6D-216ENST00000561106 TARBP1Q13395 1621 aaKnown RBP25.33■■□□□ 1.65
SEMA6D-216ENST00000561106 RAD54L2Q9Y4B4 1467 aa25.33■■□□□ 1.65
SEMA6D-216ENST00000561106 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
SEMA6D-216ENST00000561106 SOGA1O94964 1423 aa25.31■■□□□ 1.64
SEMA6D-216ENST00000561106 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.63
SEMA6D-216ENST00000561106 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.63
SEMA6D-216ENST00000561106 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.63
SEMA6D-216ENST00000561106 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
SEMA6D-216ENST00000561106 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
SEMA6D-216ENST00000561106 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
SEMA6D-216ENST00000561106 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
SEMA6D-216ENST00000561106 OSCARQ8IYS5 282 aa25.11■■□□□ 1.61
SEMA6D-216ENST00000561106 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
SEMA6D-216ENST00000561106 ABCA10Q8WWZ4 1543 aa25.06■■□□□ 1.6
SEMA6D-216ENST00000561106 GAPVD1Q14C86 1478 aa24.99■■□□□ 1.59
SEMA6D-216ENST00000561106 GRIN2BQ13224 1484 aa24.97■■□□□ 1.59
SEMA6D-216ENST00000561106 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
SEMA6D-216ENST00000561106 FBLN2P98095 1184 aa24.95■■□□□ 1.58
SEMA6D-216ENST00000561106 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
SEMA6D-216ENST00000561106 CHD1O14646 1710 aa24.93■■□□□ 1.58
SEMA6D-216ENST00000561106 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.58
SEMA6D-216ENST00000561106 PBRM1Q86U86 1689 aa24.89■■□□□ 1.58
SEMA6D-216ENST00000561106 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
SEMA6D-216ENST00000561106 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
SEMA6D-216ENST00000561106 ERICH3Q5RHP9 1530 aa24.73■■□□□ 1.55
SEMA6D-216ENST00000561106 ADAMTS12P58397 1594 aa24.69■■□□□ 1.54
SEMA6D-216ENST00000561106 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
SEMA6D-216ENST00000561106 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
SEMA6D-216ENST00000561106 IGF1RP08069 1367 aa24.67■■□□□ 1.54
SEMA6D-216ENST00000561106 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
SEMA6D-216ENST00000561106 RIMBP3CA6NJZ7 1639 aa24.65■■□□□ 1.54
SEMA6D-216ENST00000561106 RIMBP3BA6NNM3 1639 aa24.65■■□□□ 1.54
SEMA6D-216ENST00000561106 RIMBP3Q9UFD9 1639 aa24.65■■□□□ 1.54
SEMA6D-216ENST00000561106 CLASP1Q7Z460 1538 aa24.65■■□□□ 1.54
SEMA6D-216ENST00000561106 ARHGEF11O15085 1522 aa24.63■■□□□ 1.53
SEMA6D-216ENST00000561106 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
SEMA6D-216ENST00000561106 NUP160Q12769 1436 aa24.56■■□□□ 1.52
SEMA6D-216ENST00000561106 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
SEMA6D-216ENST00000561106 RUSC2Q8N2Y8 1516 aa24.54■■□□□ 1.52
SEMA6D-216ENST00000561106 CYB5RLQ6IPT4 315 aa24.5■■□□□ 1.51
SEMA6D-216ENST00000561106 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
SEMA6D-216ENST00000561106 CUL7Q14999 1698 aa24.46■■□□□ 1.51
SEMA6D-216ENST00000561106 ARAP1Q96P48 1450 aa24.45■■□□□ 1.51
SEMA6D-216ENST00000561106 JPH4Q96JJ6 628 aa24.39■■□□□ 1.49
SEMA6D-216ENST00000561106 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms