RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
LRRC49-227ENST00000561081 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
LRRC49-227ENST00000561081 ZCCHC6Q5VYS8 1495 aaKnown RBP19.51■□□□□ 0.71
LRRC49-227ENST00000561081 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
LRRC49-227ENST00000561081 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
LRRC49-227ENST00000561081 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
LRRC49-227ENST00000561081 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
LRRC49-227ENST00000561081 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
LRRC49-227ENST00000561081 ABCC9O60706 1549 aa18.57■□□□□ 0.56
LRRC49-227ENST00000561081 NACADO15069 1562 aa18.49■□□□□ 0.55
LRRC49-227ENST00000561081 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
LRRC49-227ENST00000561081 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
LRRC49-227ENST00000561081 RSF1Q96T23 1441 aaPredicted RBP18.12■□□□□ 0.49
LRRC49-227ENST00000561081 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
LRRC49-227ENST00000561081 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
LRRC49-227ENST00000561081 UNC13AQ9UPW8 1703 aa17.94■□□□□ 0.46
LRRC49-227ENST00000561081 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
LRRC49-227ENST00000561081 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
LRRC49-227ENST00000561081 WIZO95785 1651 aa17.8■□□□□ 0.44
LRRC49-227ENST00000561081 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
LRRC49-227ENST00000561081 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
LRRC49-227ENST00000561081 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
LRRC49-227ENST00000561081 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.41
LRRC49-227ENST00000561081 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
LRRC49-227ENST00000561081 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
LRRC49-227ENST00000561081 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
LRRC49-227ENST00000561081 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
LRRC49-227ENST00000561081 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
LRRC49-227ENST00000561081 LOC105371045A0A1W2PR82 267 aa17.44■□□□□ 0.38
LRRC49-227ENST00000561081 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
LRRC49-227ENST00000561081 FAM9AQ8IZU1 332 aaPredicted RBP17.24■□□□□ 0.35
LRRC49-227ENST00000561081 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
LRRC49-227ENST00000561081 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
LRRC49-227ENST00000561081 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
LRRC49-227ENST00000561081 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
LRRC49-227ENST00000561081 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
LRRC49-227ENST00000561081 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.32
LRRC49-227ENST00000561081 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
LRRC49-227ENST00000561081 SOGA1O94964 1423 aa16.98■□□□□ 0.31
LRRC49-227ENST00000561081 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
LRRC49-227ENST00000561081 EEA1Q15075 1411 aa16.95■□□□□ 0.3
LRRC49-227ENST00000561081 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
LRRC49-227ENST00000561081 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
LRRC49-227ENST00000561081 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
LRRC49-227ENST00000561081 HRCP23327 699 aa16.86■□□□□ 0.29
LRRC49-227ENST00000561081 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
LRRC49-227ENST00000561081 CFTRP13569 1480 aa16.82■□□□□ 0.28
LRRC49-227ENST00000561081 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
LRRC49-227ENST00000561081 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
LRRC49-227ENST00000561081 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
LRRC49-227ENST00000561081 GOLGA3Q08378 1498 aa16.77■□□□□ 0.27
LRRC49-227ENST00000561081 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
LRRC49-227ENST00000561081 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
LRRC49-227ENST00000561081 KIF21BO75037 1637 aa16.74■□□□□ 0.27
LRRC49-227ENST00000561081 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
LRRC49-227ENST00000561081 CUX1P39880 1505 aa16.72■□□□□ 0.27
LRRC49-227ENST00000561081 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
LRRC49-227ENST00000561081 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
LRRC49-227ENST00000561081 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
LRRC49-227ENST00000561081 PPARGC1BQ86YN6 1023 aaKnown RBP16.6■□□□□ 0.25
LRRC49-227ENST00000561081 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
LRRC49-227ENST00000561081 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
LRRC49-227ENST00000561081 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
LRRC49-227ENST00000561081 CLIP1P30622 1438 aa16.53■□□□□ 0.24
LRRC49-227ENST00000561081 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
LRRC49-227ENST00000561081 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
LRRC49-227ENST00000561081 NESP48681 1621 aa16.45■□□□□ 0.22
LRRC49-227ENST00000561081 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
LRRC49-227ENST00000561081 CUX2O14529 1486 aa16.43■□□□□ 0.22
LRRC49-227ENST00000561081 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
LRRC49-227ENST00000561081 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
LRRC49-227ENST00000561081 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
LRRC49-227ENST00000561081 IGF1RP08069 1367 aa16.39■□□□□ 0.21
LRRC49-227ENST00000561081 TTBK1Q5TCY1 1321 aaPredicted RBP16.38■□□□□ 0.21
LRRC49-227ENST00000561081 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
LRRC49-227ENST00000561081 RANGAP1P46060 587 aaPredicted RBP16.36■□□□□ 0.21
LRRC49-227ENST00000561081 ARAP1Q96P48 1450 aa16.33■□□□□ 0.21
LRRC49-227ENST00000561081 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.21
LRRC49-227ENST00000561081 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.2
LRRC49-227ENST00000561081 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
LRRC49-227ENST00000561081 RAD54L2Q9Y4B4 1467 aa16.3■□□□□ 0.2
LRRC49-227ENST00000561081 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
LRRC49-227ENST00000561081 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
LRRC49-227ENST00000561081 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
LRRC49-227ENST00000561081 APLP2Q06481 763 aa16.27■□□□□ 0.19
LRRC49-227ENST00000561081 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
LRRC49-227ENST00000561081 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
LRRC49-227ENST00000561081 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
LRRC49-227ENST00000561081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
LRRC49-227ENST00000561081 CUL7Q14999 1698 aa16.19■□□□□ 0.18
LRRC49-227ENST00000561081 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
LRRC49-227ENST00000561081 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
LRRC49-227ENST00000561081 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
LRRC49-227ENST00000561081 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
LRRC49-227ENST00000561081 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
LRRC49-227ENST00000561081 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
LRRC49-227ENST00000561081 CTTNBP2Q8WZ74 1663 aa16.08■□□□□ 0.17
LRRC49-227ENST00000561081 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
LRRC49-227ENST00000561081 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
LRRC49-227ENST00000561081 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms