RNA–Protein interactions for RNA: ENST00000560771.5

AP3S2-213, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 3

Gene AP3S2, Length 740 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-213ENST00000560771 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
AP3S2-213ENST00000560771 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
AP3S2-213ENST00000560771 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
AP3S2-213ENST00000560771 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
AP3S2-213ENST00000560771 ABCC9O60706 1549 aa25.8■■□□□ 1.72
AP3S2-213ENST00000560771 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
AP3S2-213ENST00000560771 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
AP3S2-213ENST00000560771 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
AP3S2-213ENST00000560771 NACADO15069 1562 aa25.38■■□□□ 1.65
AP3S2-213ENST00000560771 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
AP3S2-213ENST00000560771 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
AP3S2-213ENST00000560771 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
AP3S2-213ENST00000560771 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
AP3S2-213ENST00000560771 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
AP3S2-213ENST00000560771 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
AP3S2-213ENST00000560771 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
AP3S2-213ENST00000560771 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
AP3S2-213ENST00000560771 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
AP3S2-213ENST00000560771 MROH2BQ7Z745 1585 aa24.05■■□□□ 1.44
AP3S2-213ENST00000560771 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
AP3S2-213ENST00000560771 WIZO95785 1651 aa23.82■■□□□ 1.4
AP3S2-213ENST00000560771 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
AP3S2-213ENST00000560771 PEG3Q9GZU2 1588 aa23.65■■□□□ 1.38
AP3S2-213ENST00000560771 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.38
AP3S2-213ENST00000560771 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
AP3S2-213ENST00000560771 ATAD2BQ9ULI0 1458 aa23.6■■□□□ 1.37
AP3S2-213ENST00000560771 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
AP3S2-213ENST00000560771 NCAPD3P42695 1498 aa23.41■■□□□ 1.34
AP3S2-213ENST00000560771 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
AP3S2-213ENST00000560771 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
AP3S2-213ENST00000560771 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
AP3S2-213ENST00000560771 CC2D2AQ9P2K1 1620 aa23.3■■□□□ 1.32
AP3S2-213ENST00000560771 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
AP3S2-213ENST00000560771 CFTRP13569 1480 aa22.87■■□□□ 1.25
AP3S2-213ENST00000560771 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
AP3S2-213ENST00000560771 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.25
AP3S2-213ENST00000560771 WRNQ14191 1432 aaPredicted RBP eCLIP22.78■■□□□ 1.24
AP3S2-213ENST00000560771 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
AP3S2-213ENST00000560771 PRDM2Q13029 1718 aa22.67■■□□□ 1.22
AP3S2-213ENST00000560771 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
AP3S2-213ENST00000560771 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
AP3S2-213ENST00000560771 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
AP3S2-213ENST00000560771 NESP48681 1621 aa22.58■■□□□ 1.21
AP3S2-213ENST00000560771 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
AP3S2-213ENST00000560771 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
AP3S2-213ENST00000560771 PDS5BQ9NTI5 1447 aa22.52■■□□□ 1.2
AP3S2-213ENST00000560771 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
AP3S2-213ENST00000560771 CUX1P39880 1505 aa22.51■■□□□ 1.19
AP3S2-213ENST00000560771 EEA1Q15075 1411 aa22.47■■□□□ 1.19
AP3S2-213ENST00000560771 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
AP3S2-213ENST00000560771 SOGA1O94964 1423 aa22.43■■□□□ 1.18
AP3S2-213ENST00000560771 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
AP3S2-213ENST00000560771 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
AP3S2-213ENST00000560771 CSRNP3Q8WYN3 585 aa22.33■■□□□ 1.17
AP3S2-213ENST00000560771 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
AP3S2-213ENST00000560771 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
AP3S2-213ENST00000560771 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
AP3S2-213ENST00000560771 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
AP3S2-213ENST00000560771 EHMT2Q96KQ7 1210 aa22.27■■□□□ 1.16
AP3S2-213ENST00000560771 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
AP3S2-213ENST00000560771 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
AP3S2-213ENST00000560771 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
AP3S2-213ENST00000560771 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
AP3S2-213ENST00000560771 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
AP3S2-213ENST00000560771 CUX2O14529 1486 aa22.17■■□□□ 1.14
AP3S2-213ENST00000560771 GOLGA3Q08378 1498 aa22.14■■□□□ 1.13
AP3S2-213ENST00000560771 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
AP3S2-213ENST00000560771 KIF21BO75037 1637 aa22.1■■□□□ 1.13
AP3S2-213ENST00000560771 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
AP3S2-213ENST00000560771 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
AP3S2-213ENST00000560771 WDR62O43379 1518 aa22.05■■□□□ 1.12
AP3S2-213ENST00000560771 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
AP3S2-213ENST00000560771 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
AP3S2-213ENST00000560771 IGF1RP08069 1367 aa21.99■■□□□ 1.11
AP3S2-213ENST00000560771 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
AP3S2-213ENST00000560771 RAPGEF2Q9Y4G8 1499 aa21.97■■□□□ 1.11
AP3S2-213ENST00000560771 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
AP3S2-213ENST00000560771 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
AP3S2-213ENST00000560771 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
AP3S2-213ENST00000560771 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
AP3S2-213ENST00000560771 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
AP3S2-213ENST00000560771 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
AP3S2-213ENST00000560771 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
AP3S2-213ENST00000560771 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
AP3S2-213ENST00000560771 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
AP3S2-213ENST00000560771 CUL7Q14999 1698 aa21.84■■□□□ 1.09
AP3S2-213ENST00000560771 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.08
AP3S2-213ENST00000560771 CLIP1P30622 1438 aa21.78■■□□□ 1.08
AP3S2-213ENST00000560771 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
AP3S2-213ENST00000560771 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
AP3S2-213ENST00000560771 RANGAP1P46060 587 aaPredicted RBP21.73■■□□□ 1.07
AP3S2-213ENST00000560771 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
AP3S2-213ENST00000560771 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
AP3S2-213ENST00000560771 EIF4G3O43432 1585 aaKnown RBP21.67■■□□□ 1.06
AP3S2-213ENST00000560771 ADAMTS12P58397 1594 aa21.63■■□□□ 1.05
AP3S2-213ENST00000560771 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
AP3S2-213ENST00000560771 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
AP3S2-213ENST00000560771 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
AP3S2-213ENST00000560771 CTTNBP2Q8WZ74 1663 aa21.53■■□□□ 1.04
AP3S2-213ENST00000560771 ARAP1Q96P48 1450 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms