RNA–Protein interactions for RNA: ENST00000560664.1

LIPC-207, Transcript of lipase C, hepatic type, humanhuman

TSL 3

Gene LIPC, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPC-207ENST00000560664 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
LIPC-207ENST00000560664 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
LIPC-207ENST00000560664 ABCC9O60706 1549 aa30.17■■■□□ 2.42
LIPC-207ENST00000560664 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
LIPC-207ENST00000560664 RB1CC1Q8TDY2 1594 aa28.9■■■□□ 2.22
LIPC-207ENST00000560664 NACADO15069 1562 aa28.83■■■□□ 2.21
LIPC-207ENST00000560664 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
LIPC-207ENST00000560664 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
LIPC-207ENST00000560664 DCAF1Q9Y4B6 1507 aa28.39■■■□□ 2.14
LIPC-207ENST00000560664 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
LIPC-207ENST00000560664 UNC13AQ9UPW8 1703 aa28.15■■■□□ 2.1
LIPC-207ENST00000560664 BICRAQ9NZM4 1560 aa28.02■■■□□ 2.08
LIPC-207ENST00000560664 DNAJC5BQ9UF47 199 aa27.97■■■□□ 2.07
LIPC-207ENST00000560664 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
LIPC-207ENST00000560664 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
LIPC-207ENST00000560664 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
LIPC-207ENST00000560664 CC2D2AQ9P2K1 1620 aa27.24■■□□□ 1.95
LIPC-207ENST00000560664 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
LIPC-207ENST00000560664 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
LIPC-207ENST00000560664 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
LIPC-207ENST00000560664 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
LIPC-207ENST00000560664 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
LIPC-207ENST00000560664 SMARCA2P51531 1590 aa26.54■■□□□ 1.84
LIPC-207ENST00000560664 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
LIPC-207ENST00000560664 HMGXB3Q12766 1538 aa26.42■■□□□ 1.82
LIPC-207ENST00000560664 PEG3Q9GZU2 1588 aa26.4■■□□□ 1.82
LIPC-207ENST00000560664 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
LIPC-207ENST00000560664 WIZO95785 1651 aa26.15■■□□□ 1.78
LIPC-207ENST00000560664 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
LIPC-207ENST00000560664 NESP48681 1621 aa26.05■■□□□ 1.76
LIPC-207ENST00000560664 ERCC6Q03468 1493 aa26.02■■□□□ 1.76
LIPC-207ENST00000560664 LAMC3Q9Y6N6 1575 aa25.92■■□□□ 1.74
LIPC-207ENST00000560664 CADPSQ9ULU8 1353 aa25.89■■□□□ 1.74
LIPC-207ENST00000560664 TOP2AP11388 1531 aaKnown RBP25.85■■□□□ 1.73
LIPC-207ENST00000560664 PDS5BQ9NTI5 1447 aa25.82■■□□□ 1.72
LIPC-207ENST00000560664 CUX2O14529 1486 aa25.79■■□□□ 1.72
LIPC-207ENST00000560664 CFTRP13569 1480 aa25.66■■□□□ 1.7
LIPC-207ENST00000560664 KIF21AQ7Z4S6 1674 aa25.65■■□□□ 1.7
LIPC-207ENST00000560664 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
LIPC-207ENST00000560664 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
LIPC-207ENST00000560664 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
LIPC-207ENST00000560664 MRC2Q9UBG0 1479 aa25.52■■□□□ 1.68
LIPC-207ENST00000560664 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
LIPC-207ENST00000560664 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
LIPC-207ENST00000560664 WDR62O43379 1518 aa25.41■■□□□ 1.66
LIPC-207ENST00000560664 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
LIPC-207ENST00000560664 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
LIPC-207ENST00000560664 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
LIPC-207ENST00000560664 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
LIPC-207ENST00000560664 TOPBP1Q92547 1522 aa25.11■■□□□ 1.61
LIPC-207ENST00000560664 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
LIPC-207ENST00000560664 IFT140Q96RY7 1462 aa25.01■■□□□ 1.59
LIPC-207ENST00000560664 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
LIPC-207ENST00000560664 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
LIPC-207ENST00000560664 SOGA1O94964 1423 aa24.84■■□□□ 1.57
LIPC-207ENST00000560664 CUX1P39880 1505 aa24.83■■□□□ 1.57
LIPC-207ENST00000560664 OSCARQ8IYS5 282 aa24.83■■□□□ 1.57
LIPC-207ENST00000560664 TARBP1Q13395 1621 aaKnown RBP24.81■■□□□ 1.56
LIPC-207ENST00000560664 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
LIPC-207ENST00000560664 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
LIPC-207ENST00000560664 FGD5Q6ZNL6 1462 aa24.79■■□□□ 1.56
LIPC-207ENST00000560664 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
LIPC-207ENST00000560664 EIF4G3O43432 1585 aaKnown RBP24.72■■□□□ 1.55
LIPC-207ENST00000560664 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
LIPC-207ENST00000560664 FBLN2P98095 1184 aa24.6■■□□□ 1.53
LIPC-207ENST00000560664 WDR97A6NE52 1622 aa24.58■■□□□ 1.53
LIPC-207ENST00000560664 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
LIPC-207ENST00000560664 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
LIPC-207ENST00000560664 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
LIPC-207ENST00000560664 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
LIPC-207ENST00000560664 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
LIPC-207ENST00000560664 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
LIPC-207ENST00000560664 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
LIPC-207ENST00000560664 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
LIPC-207ENST00000560664 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
LIPC-207ENST00000560664 CHD1O14646 1710 aa24.44■■□□□ 1.5
LIPC-207ENST00000560664 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
LIPC-207ENST00000560664 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.5
LIPC-207ENST00000560664 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
LIPC-207ENST00000560664 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
LIPC-207ENST00000560664 ARHGEF11O15085 1522 aa24.29■■□□□ 1.48
LIPC-207ENST00000560664 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
LIPC-207ENST00000560664 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
LIPC-207ENST00000560664 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
LIPC-207ENST00000560664 ERICH3Q5RHP9 1530 aa24.24■■□□□ 1.47
LIPC-207ENST00000560664 FHAD1B1AJZ9 1412 aa24.23■■□□□ 1.47
LIPC-207ENST00000560664 CYB5RLQ6IPT4 315 aa24.21■■□□□ 1.47
LIPC-207ENST00000560664 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
LIPC-207ENST00000560664 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
LIPC-207ENST00000560664 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
LIPC-207ENST00000560664 KIF27Q86VH2 1401 aa24.16■■□□□ 1.46
LIPC-207ENST00000560664 IGF1RP08069 1367 aa24.13■■□□□ 1.45
LIPC-207ENST00000560664 NUP160Q12769 1436 aa24.1■■□□□ 1.45
LIPC-207ENST00000560664 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
LIPC-207ENST00000560664 CEP170Q5SW79 1584 aa24.04■■□□□ 1.44
LIPC-207ENST00000560664 CARMIL1Q5VZK9 1371 aa23.98■■□□□ 1.43
LIPC-207ENST00000560664 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
LIPC-207ENST00000560664 CUL7Q14999 1698 aa23.93■■□□□ 1.42
LIPC-207ENST00000560664 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.41
LIPC-207ENST00000560664 ERCC6L2Q5T890 1561 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms