RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
SNRPCP18-201ENST00000560619 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
SNRPCP18-201ENST00000560619 ABCC9O60706 1549 aa22.97■■□□□ 1.27
SNRPCP18-201ENST00000560619 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
SNRPCP18-201ENST00000560619 NACADO15069 1562 aa22.36■■□□□ 1.17
SNRPCP18-201ENST00000560619 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
SNRPCP18-201ENST00000560619 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
SNRPCP18-201ENST00000560619 DCAF1Q9Y4B6 1507 aa22.29■■□□□ 1.16
SNRPCP18-201ENST00000560619 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
SNRPCP18-201ENST00000560619 UNC13AQ9UPW8 1703 aa21.73■■□□□ 1.07
SNRPCP18-201ENST00000560619 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
SNRPCP18-201ENST00000560619 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
SNRPCP18-201ENST00000560619 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
SNRPCP18-201ENST00000560619 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNRPCP18-201ENST00000560619 EIF4G1Q04637 1599 aaKnown RBP20.99■□□□□ 0.95
SNRPCP18-201ENST00000560619 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
SNRPCP18-201ENST00000560619 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
SNRPCP18-201ENST00000560619 BAZ1AQ9NRL2 1556 aaPredicted RBP20.78■□□□□ 0.92
SNRPCP18-201ENST00000560619 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
SNRPCP18-201ENST00000560619 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
SNRPCP18-201ENST00000560619 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
SNRPCP18-201ENST00000560619 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
SNRPCP18-201ENST00000560619 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
SNRPCP18-201ENST00000560619 ATAD2BQ9ULI0 1458 aa20.6■□□□□ 0.89
SNRPCP18-201ENST00000560619 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
SNRPCP18-201ENST00000560619 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
SNRPCP18-201ENST00000560619 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
SNRPCP18-201ENST00000560619 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
SNRPCP18-201ENST00000560619 WIZO95785 1651 aa20.36■□□□□ 0.85
SNRPCP18-201ENST00000560619 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
SNRPCP18-201ENST00000560619 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
SNRPCP18-201ENST00000560619 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
SNRPCP18-201ENST00000560619 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
SNRPCP18-201ENST00000560619 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
SNRPCP18-201ENST00000560619 CFTRP13569 1480 aa19.92■□□□□ 0.78
SNRPCP18-201ENST00000560619 NESP48681 1621 aa19.92■□□□□ 0.78
SNRPCP18-201ENST00000560619 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
SNRPCP18-201ENST00000560619 ERCC6Q03468 1493 aa19.82■□□□□ 0.76
SNRPCP18-201ENST00000560619 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
SNRPCP18-201ENST00000560619 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
SNRPCP18-201ENST00000560619 FANCD2Q9BXW9 1451 aa19.72■□□□□ 0.75
SNRPCP18-201ENST00000560619 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
SNRPCP18-201ENST00000560619 CUX2O14529 1486 aa19.66■□□□□ 0.74
SNRPCP18-201ENST00000560619 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
SNRPCP18-201ENST00000560619 MRC2Q9UBG0 1479 aa19.63■□□□□ 0.73
SNRPCP18-201ENST00000560619 WDR62O43379 1518 aa19.58■□□□□ 0.73
SNRPCP18-201ENST00000560619 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
SNRPCP18-201ENST00000560619 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
SNRPCP18-201ENST00000560619 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
SNRPCP18-201ENST00000560619 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
SNRPCP18-201ENST00000560619 CUX1P39880 1505 aa19.31■□□□□ 0.68
SNRPCP18-201ENST00000560619 IFT140Q96RY7 1462 aa19.3■□□□□ 0.68
SNRPCP18-201ENST00000560619 WRNQ14191 1432 aaPredicted RBP eCLIP19.28■□□□□ 0.68
SNRPCP18-201ENST00000560619 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.67
SNRPCP18-201ENST00000560619 TOP2BQ02880 1626 aa19.24■□□□□ 0.67
SNRPCP18-201ENST00000560619 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
SNRPCP18-201ENST00000560619 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
SNRPCP18-201ENST00000560619 SOGA1O94964 1423 aa19.21■□□□□ 0.67
SNRPCP18-201ENST00000560619 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
SNRPCP18-201ENST00000560619 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
SNRPCP18-201ENST00000560619 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
SNRPCP18-201ENST00000560619 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
SNRPCP18-201ENST00000560619 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
SNRPCP18-201ENST00000560619 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
SNRPCP18-201ENST00000560619 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
SNRPCP18-201ENST00000560619 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNRPCP18-201ENST00000560619 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
SNRPCP18-201ENST00000560619 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
SNRPCP18-201ENST00000560619 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
SNRPCP18-201ENST00000560619 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
SNRPCP18-201ENST00000560619 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
SNRPCP18-201ENST00000560619 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
SNRPCP18-201ENST00000560619 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
SNRPCP18-201ENST00000560619 PBRM1Q86U86 1689 aa18.91■□□□□ 0.62
SNRPCP18-201ENST00000560619 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
SNRPCP18-201ENST00000560619 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
SNRPCP18-201ENST00000560619 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
SNRPCP18-201ENST00000560619 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
SNRPCP18-201ENST00000560619 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
SNRPCP18-201ENST00000560619 FHAD1B1AJZ9 1412 aa18.81■□□□□ 0.6
SNRPCP18-201ENST00000560619 IGF1RP08069 1367 aa18.8■□□□□ 0.6
SNRPCP18-201ENST00000560619 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
SNRPCP18-201ENST00000560619 CHD1O14646 1710 aa18.78■□□□□ 0.6
SNRPCP18-201ENST00000560619 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
SNRPCP18-201ENST00000560619 ADAMTS12P58397 1594 aa18.77■□□□□ 0.6
SNRPCP18-201ENST00000560619 CUL7Q14999 1698 aa18.75■□□□□ 0.59
SNRPCP18-201ENST00000560619 FBLN2P98095 1184 aa18.74■□□□□ 0.59
SNRPCP18-201ENST00000560619 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
SNRPCP18-201ENST00000560619 EEA1Q15075 1411 aa18.71■□□□□ 0.59
SNRPCP18-201ENST00000560619 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
SNRPCP18-201ENST00000560619 NUP160Q12769 1436 aa18.66■□□□□ 0.58
SNRPCP18-201ENST00000560619 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
SNRPCP18-201ENST00000560619 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.57
SNRPCP18-201ENST00000560619 RAPGEF2Q9Y4G8 1499 aa18.59■□□□□ 0.57
SNRPCP18-201ENST00000560619 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
SNRPCP18-201ENST00000560619 CEP170Q5SW79 1584 aa18.58■□□□□ 0.56
SNRPCP18-201ENST00000560619 PRXQ9BXM0 1461 aa18.58■□□□□ 0.56
SNRPCP18-201ENST00000560619 KIAA0586Q9BVV6 1533 aa18.54■□□□□ 0.56
SNRPCP18-201ENST00000560619 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
SNRPCP18-201ENST00000560619 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms