RNA–Protein interactions for RNA: ENST00000560573.1

ISG20-209, Transcript of interferon stimulated exonuclease gene 20, humanhuman

TSL 1 (best)

Gene ISG20, Length 2,698 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ISG20-209ENST00000560573 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
ISG20-209ENST00000560573 CCDC180Q9P1Z9 1646 aa32.57■■■□□ 2.8
ISG20-209ENST00000560573 DCAF8L2P0C7V8 631 aa31.96■■■□□ 2.71
ISG20-209ENST00000560573 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
ISG20-209ENST00000560573 SHROOM4Q9ULL8 1493 aa31.88■■■□□ 2.69
ISG20-209ENST00000560573 ABCC9O60706 1549 aa31.12■■■□□ 2.57
ISG20-209ENST00000560573 DCAF1Q9Y4B6 1507 aa31.07■■■□□ 2.56
ISG20-209ENST00000560573 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
ISG20-209ENST00000560573 SCRIBQ14160 1630 aa30.51■■■□□ 2.47
ISG20-209ENST00000560573 MYO15BQ96JP2 1530 aa30.49■■■□□ 2.47
ISG20-209ENST00000560573 NACADO15069 1562 aa30.39■■■□□ 2.45
ISG20-209ENST00000560573 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
ISG20-209ENST00000560573 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
ISG20-209ENST00000560573 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
ISG20-209ENST00000560573 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
ISG20-209ENST00000560573 UNC13AQ9UPW8 1703 aa29.57■■■□□ 2.32
ISG20-209ENST00000560573 CHIC1Q5VXU3 224 aa29.51■■■□□ 2.31
ISG20-209ENST00000560573 MROH2BQ7Z745 1585 aa29.49■■■□□ 2.31
ISG20-209ENST00000560573 BICRAQ9NZM4 1560 aa29.31■■■□□ 2.28
ISG20-209ENST00000560573 WIZO95785 1651 aa29.27■■■□□ 2.28
ISG20-209ENST00000560573 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
ISG20-209ENST00000560573 SMARCA4P51532 1647 aa29.06■■■□□ 2.24
ISG20-209ENST00000560573 TRIM41Q8WV44 630 aa28.78■■■□□ 2.2
ISG20-209ENST00000560573 TOP2AP11388 1531 aaKnown RBP28.76■■■□□ 2.19
ISG20-209ENST00000560573 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
ISG20-209ENST00000560573 LOC105371045A0A1W2PR82 267 aa28.68■■■□□ 2.18
ISG20-209ENST00000560573 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
ISG20-209ENST00000560573 FAM9AQ8IZU1 332 aaPredicted RBP28.58■■■□□ 2.17
ISG20-209ENST00000560573 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
ISG20-209ENST00000560573 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
ISG20-209ENST00000560573 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.15
ISG20-209ENST00000560573 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
ISG20-209ENST00000560573 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
ISG20-209ENST00000560573 ABCC8Q09428 1581 aa28.33■■■□□ 2.13
ISG20-209ENST00000560573 NCAPD3P42695 1498 aa28.16■■■□□ 2.1
ISG20-209ENST00000560573 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
ISG20-209ENST00000560573 WRNQ14191 1432 aaPredicted RBP eCLIP27.96■■■□□ 2.07
ISG20-209ENST00000560573 CC2D2AQ9P2K1 1620 aa27.94■■■□□ 2.06
ISG20-209ENST00000560573 SOGA1O94964 1423 aa27.93■■■□□ 2.06
ISG20-209ENST00000560573 RUSC2Q8N2Y8 1516 aa27.84■■■□□ 2.05
ISG20-209ENST00000560573 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
ISG20-209ENST00000560573 PCGF6Q9BYE7 350 aa27.74■■■□□ 2.03
ISG20-209ENST00000560573 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
ISG20-209ENST00000560573 CFTRP13569 1480 aa27.7■■■□□ 2.02
ISG20-209ENST00000560573 DNAJC5BQ9UF47 199 aa27.69■■■□□ 2.02
ISG20-209ENST00000560573 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
ISG20-209ENST00000560573 UBTFP17480 764 aaKnown RBP27.57■■■□□ 2
ISG20-209ENST00000560573 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
ISG20-209ENST00000560573 EEA1Q15075 1411 aa27.51■■□□□ 1.99
ISG20-209ENST00000560573 CUX1P39880 1505 aa27.5■■□□□ 1.99
ISG20-209ENST00000560573 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
ISG20-209ENST00000560573 NESP48681 1621 aa27.45■■□□□ 1.99
ISG20-209ENST00000560573 BIVM-ERCC5R4GMW8 1640 aa27.39■■□□□ 1.97
ISG20-209ENST00000560573 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
ISG20-209ENST00000560573 TNIKQ9UKE5 1360 aa27.34■■□□□ 1.97
ISG20-209ENST00000560573 CEP162Q5TB80 1403 aa27.33■■□□□ 1.97
ISG20-209ENST00000560573 TRIM26Q12899 539 aaPredicted RBP27.33■■□□□ 1.97
ISG20-209ENST00000560573 GOLGA3Q08378 1498 aa27.32■■□□□ 1.96
ISG20-209ENST00000560573 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
ISG20-209ENST00000560573 PRDM2Q13029 1718 aa27.26■■□□□ 1.96
ISG20-209ENST00000560573 RAPGEF2Q9Y4G8 1499 aa27.26■■□□□ 1.95
ISG20-209ENST00000560573 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
ISG20-209ENST00000560573 TTBK1Q5TCY1 1321 aaPredicted RBP27.24■■□□□ 1.95
ISG20-209ENST00000560573 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
ISG20-209ENST00000560573 FGD5Q6ZNL6 1462 aa27.16■■□□□ 1.94
ISG20-209ENST00000560573 KIF21BO75037 1637 aa27.15■■□□□ 1.94
ISG20-209ENST00000560573 CUX2O14529 1486 aa27.13■■□□□ 1.93
ISG20-209ENST00000560573 LAMC3Q9Y6N6 1575 aa27.06■■□□□ 1.92
ISG20-209ENST00000560573 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
ISG20-209ENST00000560573 PRXQ9BXM0 1461 aa27.05■■□□□ 1.92
ISG20-209ENST00000560573 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
ISG20-209ENST00000560573 CLIP1P30622 1438 aa27.03■■□□□ 1.92
ISG20-209ENST00000560573 HRCP23327 699 aa27.01■■□□□ 1.91
ISG20-209ENST00000560573 IGF1RP08069 1367 aa27■■□□□ 1.91
ISG20-209ENST00000560573 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
ISG20-209ENST00000560573 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
ISG20-209ENST00000560573 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
ISG20-209ENST00000560573 POLA1P09884 1462 aaPredicted RBP26.97■■□□□ 1.91
ISG20-209ENST00000560573 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
ISG20-209ENST00000560573 CARMIL1Q5VZK9 1371 aa26.87■■□□□ 1.89
ISG20-209ENST00000560573 KIF21AQ7Z4S6 1674 aa26.87■■□□□ 1.89
ISG20-209ENST00000560573 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.89
ISG20-209ENST00000560573 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
ISG20-209ENST00000560573 VPS8Q8N3P4 1428 aa26.75■■□□□ 1.87
ISG20-209ENST00000560573 APLP2Q06481 763 aa26.71■■□□□ 1.87
ISG20-209ENST00000560573 PELP1Q8IZL8 1130 aaKnown RBP26.69■■□□□ 1.86
ISG20-209ENST00000560573 ARAP1Q96P48 1450 aa26.67■■□□□ 1.86
ISG20-209ENST00000560573 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
ISG20-209ENST00000560573 ARHGAP35Q9NRY4 1499 aa26.6■■□□□ 1.85
ISG20-209ENST00000560573 GAPVD1Q14C86 1478 aa26.59■■□□□ 1.85
ISG20-209ENST00000560573 MRC2Q9UBG0 1479 aa26.59■■□□□ 1.85
ISG20-209ENST00000560573 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.84
ISG20-209ENST00000560573 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
ISG20-209ENST00000560573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.53■■□□□ 1.84
ISG20-209ENST00000560573 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
ISG20-209ENST00000560573 KANK4Q5T7N3 995 aaPredicted RBP26.52■■□□□ 1.84
ISG20-209ENST00000560573 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
ISG20-209ENST00000560573 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
ISG20-209ENST00000560573 ATP1B4Q9UN42 357 aaPredicted RBP26.45■■□□□ 1.82
ISG20-209ENST00000560573 HNRNPUL2Q1KMD3 747 aaKnown RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms