RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.35
ALDH1A3-206ENST00000560555 ABCC9O60706 1549 aa26.81■■□□□ 1.88
ALDH1A3-206ENST00000560555 CCDC180Q9P1Z9 1646 aa26.34■■□□□ 1.81
ALDH1A3-206ENST00000560555 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
ALDH1A3-206ENST00000560555 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
ALDH1A3-206ENST00000560555 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
ALDH1A3-206ENST00000560555 NACADO15069 1562 aa24.79■■□□□ 1.56
ALDH1A3-206ENST00000560555 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
ALDH1A3-206ENST00000560555 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
ALDH1A3-206ENST00000560555 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
ALDH1A3-206ENST00000560555 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
ALDH1A3-206ENST00000560555 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
ALDH1A3-206ENST00000560555 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
ALDH1A3-206ENST00000560555 DNAJC5Q9H3Z4 198 aa24.32■■□□□ 1.48
ALDH1A3-206ENST00000560555 CECR2Q9BXF3 1484 aa24.23■■□□□ 1.47
ALDH1A3-206ENST00000560555 CC2D2AQ9P2K1 1620 aa24.12■■□□□ 1.45
ALDH1A3-206ENST00000560555 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
ALDH1A3-206ENST00000560555 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
ALDH1A3-206ENST00000560555 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
ALDH1A3-206ENST00000560555 CUX2O14529 1486 aa23.38■■□□□ 1.33
ALDH1A3-206ENST00000560555 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
ALDH1A3-206ENST00000560555 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
ALDH1A3-206ENST00000560555 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
ALDH1A3-206ENST00000560555 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
ALDH1A3-206ENST00000560555 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
ALDH1A3-206ENST00000560555 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
ALDH1A3-206ENST00000560555 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
ALDH1A3-206ENST00000560555 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
ALDH1A3-206ENST00000560555 NESP48681 1621 aa22.82■■□□□ 1.24
ALDH1A3-206ENST00000560555 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
ALDH1A3-206ENST00000560555 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
ALDH1A3-206ENST00000560555 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
ALDH1A3-206ENST00000560555 WIZO95785 1651 aa22.71■■□□□ 1.23
ALDH1A3-206ENST00000560555 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
ALDH1A3-206ENST00000560555 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
ALDH1A3-206ENST00000560555 LAMC3Q9Y6N6 1575 aa22.47■■□□□ 1.19
ALDH1A3-206ENST00000560555 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
ALDH1A3-206ENST00000560555 TOP2AP11388 1531 aaKnown RBP22.39■■□□□ 1.17
ALDH1A3-206ENST00000560555 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
ALDH1A3-206ENST00000560555 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
ALDH1A3-206ENST00000560555 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
ALDH1A3-206ENST00000560555 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
ALDH1A3-206ENST00000560555 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
ALDH1A3-206ENST00000560555 WDR62O43379 1518 aa22.21■■□□□ 1.15
ALDH1A3-206ENST00000560555 CFTRP13569 1480 aa22.13■■□□□ 1.13
ALDH1A3-206ENST00000560555 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
ALDH1A3-206ENST00000560555 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
ALDH1A3-206ENST00000560555 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
ALDH1A3-206ENST00000560555 RIMBP3CA6NJZ7 1639 aa21.94■■□□□ 1.1
ALDH1A3-206ENST00000560555 RIMBP3BA6NNM3 1639 aa21.94■■□□□ 1.1
ALDH1A3-206ENST00000560555 RIMBP3Q9UFD9 1639 aa21.94■■□□□ 1.1
ALDH1A3-206ENST00000560555 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
ALDH1A3-206ENST00000560555 CYB5RLQ6IPT4 315 aa21.84■■□□□ 1.09
ALDH1A3-206ENST00000560555 ARHGEF11O15085 1522 aa21.84■■□□□ 1.09
ALDH1A3-206ENST00000560555 TRHP20396 242 aaPredicted RBP21.83■■□□□ 1.09
ALDH1A3-206ENST00000560555 URB2Q14146 1524 aaKnown RBP21.81■■□□□ 1.08
ALDH1A3-206ENST00000560555 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
ALDH1A3-206ENST00000560555 ZNF608Q9ULD9 1512 aaPredicted RBP21.69■■□□□ 1.06
ALDH1A3-206ENST00000560555 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
ALDH1A3-206ENST00000560555 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
ALDH1A3-206ENST00000560555 ARAP1Q96P48 1450 aa21.59■■□□□ 1.05
ALDH1A3-206ENST00000560555 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
ALDH1A3-206ENST00000560555 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
ALDH1A3-206ENST00000560555 CUX1P39880 1505 aa21.53■■□□□ 1.04
ALDH1A3-206ENST00000560555 FBLN2P98095 1184 aa21.47■■□□□ 1.03
ALDH1A3-206ENST00000560555 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
ALDH1A3-206ENST00000560555 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
ALDH1A3-206ENST00000560555 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.02
ALDH1A3-206ENST00000560555 EIF4G3O43432 1585 aaKnown RBP21.42■■□□□ 1.02
ALDH1A3-206ENST00000560555 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
ALDH1A3-206ENST00000560555 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
ALDH1A3-206ENST00000560555 SOGA1O94964 1423 aa21.35■■□□□ 1.01
ALDH1A3-206ENST00000560555 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
ALDH1A3-206ENST00000560555 CHD1O14646 1710 aa21.35■■□□□ 1.01
ALDH1A3-206ENST00000560555 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
ALDH1A3-206ENST00000560555 TOP2BQ02880 1626 aa21.3■■□□□ 1
ALDH1A3-206ENST00000560555 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
ALDH1A3-206ENST00000560555 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
ALDH1A3-206ENST00000560555 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
ALDH1A3-206ENST00000560555 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
ALDH1A3-206ENST00000560555 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
ALDH1A3-206ENST00000560555 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
ALDH1A3-206ENST00000560555 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
ALDH1A3-206ENST00000560555 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
ALDH1A3-206ENST00000560555 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
ALDH1A3-206ENST00000560555 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
ALDH1A3-206ENST00000560555 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
ALDH1A3-206ENST00000560555 MAGI1Q96QZ7 1491 aaPredicted RBP21.03■□□□□ 0.96
ALDH1A3-206ENST00000560555 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
ALDH1A3-206ENST00000560555 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
ALDH1A3-206ENST00000560555 IGF1RP08069 1367 aa20.89■□□□□ 0.93
ALDH1A3-206ENST00000560555 ILDR1Q86SU0 546 aaPredicted RBP20.89■□□□□ 0.93
ALDH1A3-206ENST00000560555 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
ALDH1A3-206ENST00000560555 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
ALDH1A3-206ENST00000560555 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
ALDH1A3-206ENST00000560555 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.93
ALDH1A3-206ENST00000560555 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
ALDH1A3-206ENST00000560555 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
ALDH1A3-206ENST00000560555 KDM4FA0A1W2PPD8 638 aa20.76■□□□□ 0.91
ALDH1A3-206ENST00000560555 NUP160Q12769 1436 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms