RNA–Protein interactions for RNA: ENST00000560370.3

PSME2-212, Transcript of proteasome activator subunit 2, humanhuman

TSL 3

Gene PSME2, Length 620 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME2-212ENST00000560370 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
PSME2-212ENST00000560370 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
PSME2-212ENST00000560370 ABCC9O60706 1549 aa31.98■■■□□ 2.71
PSME2-212ENST00000560370 DCAF8L2P0C7V8 631 aa31.59■■■□□ 2.65
PSME2-212ENST00000560370 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
PSME2-212ENST00000560370 DCAF1Q9Y4B6 1507 aa31.13■■■□□ 2.57
PSME2-212ENST00000560370 NACADO15069 1562 aa31.05■■■□□ 2.56
PSME2-212ENST00000560370 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
PSME2-212ENST00000560370 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.54
PSME2-212ENST00000560370 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
PSME2-212ENST00000560370 SCRIBQ14160 1630 aa30.41■■■□□ 2.46
PSME2-212ENST00000560370 UNC13AQ9UPW8 1703 aa30.2■■■□□ 2.43
PSME2-212ENST00000560370 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.411e-8■■■□□ 15.2
PSME2-212ENST00000560370 BICRAQ9NZM4 1560 aa29.94■■■□□ 2.38
PSME2-212ENST00000560370 CECR2Q9BXF3 1484 aa29.35■■■□□ 2.29
PSME2-212ENST00000560370 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
PSME2-212ENST00000560370 EIF4G1Q04637 1599 aaKnown RBP29.13■■■□□ 2.25
PSME2-212ENST00000560370 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
PSME2-212ENST00000560370 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
PSME2-212ENST00000560370 SUPT5HO00267 1087 aaKnown RBP29.03■■■□□ 2.24
PSME2-212ENST00000560370 RSF1Q96T23 1441 aaPredicted RBP29.02■■■□□ 2.24
PSME2-212ENST00000560370 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
PSME2-212ENST00000560370 WIZO95785 1651 aa28.82■■■□□ 2.2
PSME2-212ENST00000560370 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
PSME2-212ENST00000560370 ATAD2BQ9ULI0 1458 aa28.8■■■□□ 2.2
PSME2-212ENST00000560370 SMARCA2P51531 1590 aa28.78■■■□□ 2.2
PSME2-212ENST00000560370 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
PSME2-212ENST00000560370 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
PSME2-212ENST00000560370 BAZ1BQ9UIG0 1483 aaKnown RBP28.63■■■□□ 2.17
PSME2-212ENST00000560370 HMGXB3Q12766 1538 aa28.52■■■□□ 2.16
PSME2-212ENST00000560370 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
PSME2-212ENST00000560370 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
PSME2-212ENST00000560370 CADPSQ9ULU8 1353 aa27.93■■■□□ 2.06
PSME2-212ENST00000560370 NESP48681 1621 aa27.85■■■□□ 2.05
PSME2-212ENST00000560370 CFTRP13569 1480 aa27.84■■■□□ 2.05
PSME2-212ENST00000560370 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
PSME2-212ENST00000560370 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
PSME2-212ENST00000560370 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
PSME2-212ENST00000560370 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
PSME2-212ENST00000560370 ERCC6Q03468 1493 aa27.53■■■□□ 2
PSME2-212ENST00000560370 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
PSME2-212ENST00000560370 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
PSME2-212ENST00000560370 ABCC8Q09428 1581 aa27.41■■□□□ 1.98
PSME2-212ENST00000560370 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
PSME2-212ENST00000560370 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
PSME2-212ENST00000560370 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
PSME2-212ENST00000560370 MRC2Q9UBG0 1479 aa27.3■■□□□ 1.96
PSME2-212ENST00000560370 URB2Q14146 1524 aaKnown RBP27.25■■□□□ 1.95
PSME2-212ENST00000560370 CUX1P39880 1505 aa27.24■■□□□ 1.95
PSME2-212ENST00000560370 TOPBP1Q92547 1522 aa27.21■■□□□ 1.95
PSME2-212ENST00000560370 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.94
PSME2-212ENST00000560370 SYNJ1O43426 1573 aa27.19■■□□□ 1.94
PSME2-212ENST00000560370 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
PSME2-212ENST00000560370 THOC2Q8NI27 1593 aaKnown RBP27.14■■□□□ 1.94
PSME2-212ENST00000560370 WDR62O43379 1518 aa27.11■■□□□ 1.93
PSME2-212ENST00000560370 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
PSME2-212ENST00000560370 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
PSME2-212ENST00000560370 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
PSME2-212ENST00000560370 SOGA1O94964 1423 aa27■■□□□ 1.91
PSME2-212ENST00000560370 RAD54L2Q9Y4B4 1467 aa26.96■■□□□ 1.91
PSME2-212ENST00000560370 CUX2O14529 1486 aa26.91■■□□□ 1.9
PSME2-212ENST00000560370 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
PSME2-212ENST00000560370 FAM9AQ8IZU1 332 aaPredicted RBP26.84■■□□□ 1.89
PSME2-212ENST00000560370 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
PSME2-212ENST00000560370 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
PSME2-212ENST00000560370 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
PSME2-212ENST00000560370 KIF27Q86VH2 1401 aa26.76■■□□□ 1.87
PSME2-212ENST00000560370 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
PSME2-212ENST00000560370 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
PSME2-212ENST00000560370 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.87
PSME2-212ENST00000560370 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
PSME2-212ENST00000560370 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
PSME2-212ENST00000560370 CSRNP3Q8WYN3 585 aa26.65■■□□□ 1.86
PSME2-212ENST00000560370 EEA1Q15075 1411 aa26.64■■□□□ 1.85
PSME2-212ENST00000560370 IGF1RP08069 1367 aa26.58■■□□□ 1.84
PSME2-212ENST00000560370 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
PSME2-212ENST00000560370 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
PSME2-212ENST00000560370 GRIN2BQ13224 1484 aa26.55■■□□□ 1.84
PSME2-212ENST00000560370 EHMT2Q96KQ7 1210 aa26.51■■□□□ 1.83
PSME2-212ENST00000560370 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
PSME2-212ENST00000560370 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
PSME2-212ENST00000560370 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
PSME2-212ENST00000560370 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
PSME2-212ENST00000560370 FBLN2P98095 1184 aa26.42■■□□□ 1.82
PSME2-212ENST00000560370 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
PSME2-212ENST00000560370 LOC105371045A0A1W2PR82 267 aa26.37■■□□□ 1.81
PSME2-212ENST00000560370 FHAD1B1AJZ9 1412 aa26.37■■□□□ 1.81
PSME2-212ENST00000560370 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
PSME2-212ENST00000560370 CUL7Q14999 1698 aa26.34■■□□□ 1.81
PSME2-212ENST00000560370 PRXQ9BXM0 1461 aa26.34■■□□□ 1.81
PSME2-212ENST00000560370 RAPGEF2Q9Y4G8 1499 aa26.32■■□□□ 1.8
PSME2-212ENST00000560370 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
PSME2-212ENST00000560370 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
PSME2-212ENST00000560370 SYNJ2O15056 1496 aa26.28■■□□□ 1.8
PSME2-212ENST00000560370 KIF21BO75037 1637 aa26.26■■□□□ 1.79
PSME2-212ENST00000560370 GOLGA3Q08378 1498 aa26.23■■□□□ 1.79
PSME2-212ENST00000560370 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
PSME2-212ENST00000560370 CHD1O14646 1710 aa26.14■■□□□ 1.77
PSME2-212ENST00000560370 RANGAP1P46060 587 aaPredicted RBP26.09■■□□□ 1.77
PSME2-212ENST00000560370 OSCARQ8IYS5 282 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms